Source Name	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [Organism]	Term Source REF	Term Accession Number	Characteristics [cell line]	Characteristics [sample type]	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [CELL LINE]
GSM1026860 2	Human Genomic DNA: Male (Promega)	GliNS2_GSC line_5	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	Genomic DNA comes from multiple anonymous donors.	P-GSE41875-2	ArrayExpress	GSM1026860 extract 2	genomic DNA	P-GSE41875-3	ArrayExpress	GSM1026860 LE 2	Cy5	P-GSE41875-4	ArrayExpress	GSM1026860	A-GEOD-8841	ArrayExpress	array assay	P-GSE41875-5	ArrayExpress	P-GSE41875-6	ArrayExpress	GSM1026860_GliNS2_cnv.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.raw.1.zip	P-GSE41875-1	ArrayExpress	GSM1026860_sample_table.txt norm	GSM1026860_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.processed.1.zip	not specified
GSM1026860 1	Glioma Stem Cell line	GliNS2_GSC line_5	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	GliNS2	  	P-GSE41875-2	ArrayExpress	GSM1026860 extract 1	genomic DNA	P-GSE41875-3	ArrayExpress	GSM1026860 LE 1	Cy3	P-GSE41875-4	ArrayExpress	GSM1026860	A-GEOD-8841	ArrayExpress	array assay	P-GSE41875-5	ArrayExpress	P-GSE41875-6	ArrayExpress	GSM1026860_GliNS2_cnv.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.raw.1.zip	P-GSE41875-1	ArrayExpress	GSM1026860_sample_table.txt norm	GSM1026860_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.processed.1.zip	GliNS2
GSM1026859 2	Human Genomic DNA: Male (Promega)	G179_GSC line_4	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	Genomic DNA comes from multiple anonymous donors.	P-GSE41875-2	ArrayExpress	GSM1026859 extract 2	genomic DNA	P-GSE41875-3	ArrayExpress	GSM1026859 LE 2	Cy5	P-GSE41875-4	ArrayExpress	GSM1026859	A-GEOD-8841	ArrayExpress	array assay	P-GSE41875-5	ArrayExpress	P-GSE41875-6	ArrayExpress	GSM1026859_G179_cnv.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.raw.1.zip	P-GSE41875-1	ArrayExpress	GSM1026859_sample_table.txt norm	GSM1026859_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.processed.1.zip	not specified
GSM1026859 1	Glioma Stem Cell line	G179_GSC line_4	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	G179	  	P-GSE41875-2	ArrayExpress	GSM1026859 extract 1	genomic DNA	P-GSE41875-3	ArrayExpress	GSM1026859 LE 1	Cy3	P-GSE41875-4	ArrayExpress	GSM1026859	A-GEOD-8841	ArrayExpress	array assay	P-GSE41875-5	ArrayExpress	P-GSE41875-6	ArrayExpress	GSM1026859_G179_cnv.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.raw.1.zip	P-GSE41875-1	ArrayExpress	GSM1026859_sample_table.txt norm	GSM1026859_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.processed.1.zip	G179
GSM1026858 2	Human Genomic DNA: Male (Promega)	G166_GSC line_3	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	Genomic DNA comes from multiple anonymous donors.	P-GSE41875-2	ArrayExpress	GSM1026858 extract 2	genomic DNA	P-GSE41875-3	ArrayExpress	GSM1026858 LE 2	Cy5	P-GSE41875-4	ArrayExpress	GSM1026858	A-GEOD-8841	ArrayExpress	array assay	P-GSE41875-5	ArrayExpress	P-GSE41875-6	ArrayExpress	GSM1026858_G166_cnv.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.raw.1.zip	P-GSE41875-1	ArrayExpress	GSM1026858_sample_table.txt norm	GSM1026858_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.processed.1.zip	not specified
GSM1026858 1	Glioma Stem Cell line	G166_GSC line_3	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	G166	  	P-GSE41875-2	ArrayExpress	GSM1026858 extract 1	genomic DNA	P-GSE41875-3	ArrayExpress	GSM1026858 LE 1	Cy3	P-GSE41875-4	ArrayExpress	GSM1026858	A-GEOD-8841	ArrayExpress	array assay	P-GSE41875-5	ArrayExpress	P-GSE41875-6	ArrayExpress	GSM1026858_G166_cnv.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.raw.1.zip	P-GSE41875-1	ArrayExpress	GSM1026858_sample_table.txt norm	GSM1026858_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.processed.1.zip	G166
GSM1026857 2	Human Genomic DNA: Male (Promega)	GBM7_GSC line_2	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	Genomic DNA comes from multiple anonymous donors.	P-GSE41875-2	ArrayExpress	GSM1026857 extract 2	genomic DNA	P-GSE41875-3	ArrayExpress	GSM1026857 LE 2	Cy5	P-GSE41875-4	ArrayExpress	GSM1026857	A-GEOD-8841	ArrayExpress	array assay	P-GSE41875-5	ArrayExpress	P-GSE41875-6	ArrayExpress	GSM1026857_GBM7_cnv.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.raw.1.zip	P-GSE41875-1	ArrayExpress	GSM1026857_sample_table.txt norm	GSM1026857_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.processed.1.zip	not specified
GSM1026857 1	Glioma Stem Cell line	GBM7_GSC line_2	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	GBM7	  	P-GSE41875-2	ArrayExpress	GSM1026857 extract 1	genomic DNA	P-GSE41875-3	ArrayExpress	GSM1026857 LE 1	Cy3	P-GSE41875-4	ArrayExpress	GSM1026857	A-GEOD-8841	ArrayExpress	array assay	P-GSE41875-5	ArrayExpress	P-GSE41875-6	ArrayExpress	GSM1026857_GBM7_cnv.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.raw.1.zip	P-GSE41875-1	ArrayExpress	GSM1026857_sample_table.txt norm	GSM1026857_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.processed.1.zip	GBM7
GSM1026856 1	Glioma Stem Cell line	GBM2_GSC line_1	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	GBM2	  	P-GSE41875-2	ArrayExpress	GSM1026856 extract 1	genomic DNA	P-GSE41875-3	ArrayExpress	GSM1026856 LE 1	Cy3	P-GSE41875-4	ArrayExpress	GSM1026856	A-GEOD-8841	ArrayExpress	array assay	P-GSE41875-5	ArrayExpress	P-GSE41875-6	ArrayExpress	GSM1026856_GBM2_cnv.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.raw.1.zip	P-GSE41875-1	ArrayExpress	GSM1026856_sample_table.txt norm	GSM1026856_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.processed.1.zip	GBM2
GSM1026856 2	Human Genomic DNA: Male (Promega)	GBM2_GSC line_1	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	  	Genomic DNA comes from multiple anonymous donors.	P-GSE41875-2	ArrayExpress	GSM1026856 extract 2	genomic DNA	P-GSE41875-3	ArrayExpress	GSM1026856 LE 2	Cy5	P-GSE41875-4	ArrayExpress	GSM1026856	A-GEOD-8841	ArrayExpress	array assay	P-GSE41875-5	ArrayExpress	P-GSE41875-6	ArrayExpress	GSM1026856_GBM2_cnv.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.raw.1.zip	P-GSE41875-1	ArrayExpress	GSM1026856_sample_table.txt norm	GSM1026856_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41875/E-GEOD-41875.processed.1.zip	not specified