Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [genotype]	Characteristics [growth protocol]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [stress]	Term Source REF	Term Accession Number	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [GENOTYPE]	FactorValue [GROWTH PROTOCOL]	FactorValue [STRESS]	Term Source REF	Term Accession Number
GSM842265 1	EM_420460_AP3_Cy3_ch2_AC3_Cy5_ch1	arcA_mutant_CTRL_REP3	arcA mutant_CTRL_H2O2_REPLICATE_3	arcA mutant	  	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	EFO	http://purl.obolibrary.org/obo/NCBITaxon_99287	CTRL	  	  	P-GSE34134-2	ArrayExpress	GSM842265 extract 1	total RNA	P-GSE34134-3	ArrayExpress	GSM842265 LE 1	Cy5	P-GSE34134-4	ArrayExpress	GSM842265	A-GEOD-14855	ArrayExpress	array assay	P-GSE34134-5	ArrayExpress	GSM842265.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.raw.1.zip	P-GSE34134-1	ArrayExpress	GSM842265_sample_table.txt norm	GSM842265_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.processed.1.zip	arcA mutant	not specified	CTRL	  	        
GSM842265 2	EM_420460_AP3_Cy3_ch2_AC3_Cy5_ch1	arcA_mutant_H2O2_REP3	arcA mutant_CTRL_H2O2_REPLICATE_3	arcA mutant	arcA minus salmonella grown to OD600 0.4 in 25 ml LB medium, and treated with 1.5 mM H2O2 for 20 min. replicate 03	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	EFO	http://purl.obolibrary.org/obo/NCBITaxon_99287	H2O2	EFO	http://purl.obolibrary.org/obo/CHEBI_16240	P-GSE34134-2	ArrayExpress	GSM842265 extract 2	total RNA	P-GSE34134-3	ArrayExpress	GSM842265 LE 2	Cy3	P-GSE34134-4	ArrayExpress	GSM842265	A-GEOD-14855	ArrayExpress	array assay	P-GSE34134-5	ArrayExpress	GSM842265.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.raw.1.zip	P-GSE34134-1	ArrayExpress	GSM842265_sample_table.txt norm	GSM842265_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.processed.1.zip	arcA mutant	arcA minus salmonella grown to OD600 0.4 in 25 ml LB medium, and treated with 1.5 mM H2O2 for 20 min. replicate 03	H2O2	EFO	http://purl.obolibrary.org/obo/CHEBI_16240
GSM842264 1	EM_420460_AC2_Cy3_ch1_AP2_Cy5_ch2	arcA_mutant_CTRL_REP2	arcA mutant_CTRL_H2O2_REPLICATE_2	arcA mutant	  	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	EFO	http://purl.obolibrary.org/obo/NCBITaxon_99287	CTRL	  	  	P-GSE34134-2	ArrayExpress	GSM842264 extract 1	total RNA	P-GSE34134-3	ArrayExpress	GSM842264 LE 1	Cy3	P-GSE34134-4	ArrayExpress	GSM842264	A-GEOD-14855	ArrayExpress	array assay	P-GSE34134-5	ArrayExpress	GSM842264.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.raw.1.zip	P-GSE34134-1	ArrayExpress	GSM842264_sample_table.txt norm	GSM842264_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.processed.1.zip	arcA mutant	not specified	CTRL	  	        
GSM842264 2	EM_420460_AC2_Cy3_ch1_AP2_Cy5_ch2	arcA_mutant_H2O2_REP2	arcA mutant_CTRL_H2O2_REPLICATE_2	arcA mutant	arcA minus salmonella grown to OD600 0.4 in 25 ml LB medium, and treated with 1.5 mM H2O2 for 20 min. replicate 02	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	EFO	http://purl.obolibrary.org/obo/NCBITaxon_99287	H2O2	EFO	http://purl.obolibrary.org/obo/CHEBI_16240	P-GSE34134-2	ArrayExpress	GSM842264 extract 2	total RNA	P-GSE34134-3	ArrayExpress	GSM842264 LE 2	Cy5	P-GSE34134-4	ArrayExpress	GSM842264	A-GEOD-14855	ArrayExpress	array assay	P-GSE34134-5	ArrayExpress	GSM842264.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.raw.1.zip	P-GSE34134-1	ArrayExpress	GSM842264_sample_table.txt norm	GSM842264_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.processed.1.zip	arcA mutant	arcA minus salmonella grown to OD600 0.4 in 25 ml LB medium, and treated with 1.5 mM H2O2 for 20 min. replicate 02	H2O2	EFO	http://purl.obolibrary.org/obo/CHEBI_16240
GSM842263 1	EM_420460_AC1_Cy5_ch1_AP1_Cy3_ch2	arcA_mutant_CTRL_REP1	arcA mutant_CTRL_H2O2_REPLICATE_1	arcA mutant	  	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	EFO	http://purl.obolibrary.org/obo/NCBITaxon_99287	CTRL	  	  	P-GSE34134-2	ArrayExpress	GSM842263 extract 1	total RNA	P-GSE34134-3	ArrayExpress	GSM842263 LE 1	Cy5	P-GSE34134-4	ArrayExpress	GSM842263	A-GEOD-14855	ArrayExpress	array assay	P-GSE34134-5	ArrayExpress	GSM842263.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.raw.1.zip	P-GSE34134-1	ArrayExpress	GSM842263_sample_table.txt norm	GSM842263_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.processed.1.zip	arcA mutant	not specified	CTRL	  	        
GSM842263 2	EM_420460_AC1_Cy5_ch1_AP1_Cy3_ch2	arcA_mutant_H2O2_REP1	arcA mutant_CTRL_H2O2_REPLICATE_1	arcA mutant	arcA minus salmonella grown to OD600 0.4 in 25 ml LB medium, and treated with 1.5 mM H2O2 for 20 min. replicate 01	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	EFO	http://purl.obolibrary.org/obo/NCBITaxon_99287	H2O2	EFO	http://purl.obolibrary.org/obo/CHEBI_16240	P-GSE34134-2	ArrayExpress	GSM842263 extract 2	total RNA	P-GSE34134-3	ArrayExpress	GSM842263 LE 2	Cy3	P-GSE34134-4	ArrayExpress	GSM842263	A-GEOD-14855	ArrayExpress	array assay	P-GSE34134-5	ArrayExpress	GSM842263.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.raw.1.zip	P-GSE34134-1	ArrayExpress	GSM842263_sample_table.txt norm	GSM842263_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.processed.1.zip	arcA mutant	arcA minus salmonella grown to OD600 0.4 in 25 ml LB medium, and treated with 1.5 mM H2O2 for 20 min. replicate 01	H2O2	EFO	http://purl.obolibrary.org/obo/CHEBI_16240
GSM842262 1	EM420454_WP3_Cy5_ch2_WC3_Cy3_ch1	WT_CTRL_REP3	WT_CTRL_H2O2_REPLICATE_3	WT	  	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	EFO	http://purl.obolibrary.org/obo/NCBITaxon_99287	CTRL	  	  	P-GSE34134-2	ArrayExpress	GSM842262 extract 1	total RNA	P-GSE34134-3	ArrayExpress	GSM842262 LE 1	Cy3	P-GSE34134-4	ArrayExpress	GSM842262	A-GEOD-14855	ArrayExpress	array assay	P-GSE34134-5	ArrayExpress	GSM842262.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.raw.1.zip	P-GSE34134-1	ArrayExpress	GSM842262_sample_table.txt norm	GSM842262_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.processed.1.zip	WT	not specified	CTRL	  	        
GSM842262 2	EM420454_WP3_Cy5_ch2_WC3_Cy3_ch1	WT_H2O2_REP3	WT_CTRL_H2O2_REPLICATE_3	WT	wt salmonella grown to OD600 0.4 in 25 ml LB medium, and treated with 1.5 mM H2O2 for 20 min. replicate 03	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	EFO	http://purl.obolibrary.org/obo/NCBITaxon_99287	H2O2	EFO	http://purl.obolibrary.org/obo/CHEBI_16240	P-GSE34134-2	ArrayExpress	GSM842262 extract 2	total RNA	P-GSE34134-3	ArrayExpress	GSM842262 LE 2	Cy5	P-GSE34134-4	ArrayExpress	GSM842262	A-GEOD-14855	ArrayExpress	array assay	P-GSE34134-5	ArrayExpress	GSM842262.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.raw.1.zip	P-GSE34134-1	ArrayExpress	GSM842262_sample_table.txt norm	GSM842262_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.processed.1.zip	WT	wt salmonella grown to OD600 0.4 in 25 ml LB medium, and treated with 1.5 mM H2O2 for 20 min. replicate 03	H2O2	EFO	http://purl.obolibrary.org/obo/CHEBI_16240
GSM842261 1	EM_WC2_Cy5_ch1_WP2_Cy3_ch2	WT_CTRL_REP2	WT_CTRL_H2O2_REPLICATE_2	WT	  	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	EFO	http://purl.obolibrary.org/obo/NCBITaxon_99287	CTRL	  	  	P-GSE34134-2	ArrayExpress	GSM842261 extract 1	total RNA	P-GSE34134-3	ArrayExpress	GSM842261 LE 1	Cy5	P-GSE34134-4	ArrayExpress	GSM842261	A-GEOD-14855	ArrayExpress	array assay	P-GSE34134-5	ArrayExpress	GSM842261.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.raw.1.zip	P-GSE34134-1	ArrayExpress	GSM842261_sample_table.txt norm	GSM842261_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.processed.1.zip	WT	not specified	CTRL	  	        
GSM842261 2	EM_WC2_Cy5_ch1_WP2_Cy3_ch2	WT_H2O2_REP2	WT_CTRL_H2O2_REPLICATE_2	WT	wt salmonella grown to OD600 0.4 in 25 ml LB medium, and treated with 1.5 mM H2O2 for 20 min. replicate 02	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	EFO	http://purl.obolibrary.org/obo/NCBITaxon_99287	H2O2	EFO	http://purl.obolibrary.org/obo/CHEBI_16240	P-GSE34134-2	ArrayExpress	GSM842261 extract 2	total RNA	P-GSE34134-3	ArrayExpress	GSM842261 LE 2	Cy3	P-GSE34134-4	ArrayExpress	GSM842261	A-GEOD-14855	ArrayExpress	array assay	P-GSE34134-5	ArrayExpress	GSM842261.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.raw.1.zip	P-GSE34134-1	ArrayExpress	GSM842261_sample_table.txt norm	GSM842261_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.processed.1.zip	WT	wt salmonella grown to OD600 0.4 in 25 ml LB medium, and treated with 1.5 mM H2O2 for 20 min. replicate 02	H2O2	EFO	http://purl.obolibrary.org/obo/CHEBI_16240
GSM842260 2	EM_420454_WC1_Cy3_ch1_WP1_Cy5_ch2	WT_H2O2_REP1	WT_CTRL_H2O2_REPLICATE_1	WT	wt salmonella grown to OD600 0.4 in 25 ml LB medium, and treated with 1.5 mM H2O2 for 20 min. replicate 01	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	EFO	http://purl.obolibrary.org/obo/NCBITaxon_99287	H2O2	EFO	http://purl.obolibrary.org/obo/CHEBI_16240	P-GSE34134-2	ArrayExpress	GSM842260 extract 2	total RNA	P-GSE34134-3	ArrayExpress	GSM842260 LE 2	Cy5	P-GSE34134-4	ArrayExpress	GSM842260	A-GEOD-14855	ArrayExpress	array assay	P-GSE34134-5	ArrayExpress	GSM842260.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.raw.1.zip	P-GSE34134-1	ArrayExpress	GSM842260_sample_table.txt norm	GSM842260_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.processed.1.zip	WT	wt salmonella grown to OD600 0.4 in 25 ml LB medium, and treated with 1.5 mM H2O2 for 20 min. replicate 01	H2O2	EFO	http://purl.obolibrary.org/obo/CHEBI_16240
GSM842260 1	EM_420454_WC1_Cy3_ch1_WP1_Cy5_ch2	WT_CTRL_REP1	WT_CTRL_H2O2_REPLICATE_1	WT	  	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	EFO	http://purl.obolibrary.org/obo/NCBITaxon_99287	CTRL	  	  	P-GSE34134-2	ArrayExpress	GSM842260 extract 1	total RNA	P-GSE34134-3	ArrayExpress	GSM842260 LE 1	Cy3	P-GSE34134-4	ArrayExpress	GSM842260	A-GEOD-14855	ArrayExpress	array assay	P-GSE34134-5	ArrayExpress	GSM842260.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.raw.1.zip	P-GSE34134-1	ArrayExpress	GSM842260_sample_table.txt norm	GSM842260_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34134/E-GEOD-34134.processed.1.zip	WT	not specified	CTRL