Source Name Characteristics [CellLine] Term Source REF Term Accession Number Characteristics [Organism] Term Source REF Term Accession Number Characteristics [DiseaseState] Term Source REF Term Accession Number Characteristics [GeneticModification] Characteristics [DevelopmentalStage] Term Source REF Term Accession Number Description Protocol REF Sample Name Protocol REF Extract Name Material Type Protocol REF Labeled Extract Name Label Material Type Protocol REF Hybridization Name Array Design REF Factor Value [GrowthCondition] Factor Value [GeneticModification] Scan Name Protocol REF Derived Array Data Matrix File Comment [Derived ArrayExpress FTP file]
GSE2700GSM52184 HEK293 EFO EFO_0001182 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 renal cell carcinoma EFO EFO_0000681 C106R transfection embryo EFO EFO_0001367 Analysis of gene expression in human embryonic kidney cells HEK293 overexpressing the transcription factors HNF4a2 or mutant forms HNF4a2 C106R and HNF4a2 R154X, which were introduced by FRT/FLP recombination. The analysis was performed 24 hours following 1µg/ml tetracycline treatment to induce the expression of the genes. Results identify HNF4a regulated genes in kidney cells being several of these genes deregulated in renal cell carcinoma. Keywords = HEK293 Keywords = embryonic kidney cells Keywords = HNF4a2 Keywords = tetracycline Keywords = FRT P-G2700-1 GSE2700GSM52184 sample P-G2700-2 GSE2700GSM52184 extract total_RNA P-G2700-3 GSE2700GSM52184 LE.biotin biotin synthetic_RNA P-G2700-5 HEK293_HNF4a2_C106R_1- A-AFFY-33 uninduced C106R transfection HEK293_HNF4a2_C106R_1- P-G2700-4 E-GEOD-2700-processed-data-1528167209.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-2700/E-GEOD-2700.processed.1.zip
GSE2700GSM52182 HEK293 EFO EFO_0001182 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 renal cell carcinoma EFO EFO_0000681 HNF4alpha2 transfection embryo EFO EFO_0001367 Analysis of gene expression in human embryonic kidney cells HEK293 overexpressing the transcription factors HNF4a2 or mutant forms HNF4a2 C106R and HNF4a2 R154X, which were introduced by FRT/FLP recombination. The analysis was performed 24 hours following 1µg/ml tetracycline treatment to induce the expression of the genes. Results identify HNF4a regulated genes in kidney cells being several of these genes deregulated in renal cell carcinoma. Keywords = HEK293 Keywords = embryonic kidney cells Keywords = HNF4a2 Keywords = tetracycline Keywords = FRT P-G2700-1 GSE2700GSM52182 sample P-G2700-2 GSE2700GSM52182 extract total_RNA P-G2700-3 GSE2700GSM52182 LE.biotin biotin synthetic_RNA P-G2700-5 HEK293_HNF4a2_4- A-AFFY-33 uninduced HNF4alpha2 transfection HEK293_HNF4a2_4- P-G2700-4 E-GEOD-2700-processed-data-1528167209.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-2700/E-GEOD-2700.processed.1.zip
GSE2700GSM52185 HEK293 EFO EFO_0001182 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 renal cell carcinoma EFO EFO_0000681 C106R transfection embryo EFO EFO_0001367 Analysis of gene expression in human embryonic kidney cells HEK293 overexpressing the transcription factors HNF4a2 or mutant forms HNF4a2 C106R and HNF4a2 R154X, which were introduced by FRT/FLP recombination. The analysis was performed 24 hours following 1µg/ml tetracycline treatment to induce the expression of the genes. Results identify HNF4a regulated genes in kidney cells being several of these genes deregulated in renal cell carcinoma. Keywords = HEK293 Keywords = embryonic kidney cells Keywords = HNF4a2 Keywords = tetracycline Keywords = FRT P-G2700-1 GSE2700GSM52185 sample P-G2700-2 GSE2700GSM52185 extract total_RNA P-G2700-3 GSE2700GSM52185 LE.biotin biotin synthetic_RNA P-G2700-5 HEK293_HNF4a2_C106R_1+ A-AFFY-33 tetracycline induced C106R transfection HEK293_HNF4a2_C106R_1+ P-G2700-4 E-GEOD-2700-processed-data-1528167209.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-2700/E-GEOD-2700.processed.1.zip
GSE2700GSM52180 HEK293 EFO EFO_0001182 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 renal cell carcinoma EFO EFO_0000681 HNF4alpha2 transfection embryo EFO EFO_0001367 Analysis of gene expression in human embryonic kidney cells HEK293 overexpressing the transcription factors HNF4a2 or mutant forms HNF4a2 C106R and HNF4a2 R154X, which were introduced by FRT/FLP recombination. The analysis was performed 24 hours following 1µg/ml tetracycline treatment to induce the expression of the genes. Results identify HNF4a regulated genes in kidney cells being several of these genes deregulated in renal cell carcinoma. Keywords = HEK293 Keywords = embryonic kidney cells Keywords = HNF4a2 Keywords = tetracycline Keywords = FRT P-G2700-1 GSE2700GSM52180 sample P-G2700-2 GSE2700GSM52180 extract total_RNA P-G2700-3 GSE2700GSM52180 LE.biotin biotin synthetic_RNA P-G2700-5 HEK293_HNF4a2_1- A-AFFY-33 uninduced HNF4alpha2 transfection HEK293_HNF4a2_1- P-G2700-4 E-GEOD-2700-processed-data-1528167209.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-2700/E-GEOD-2700.processed.1.zip
GSE2700GSM52181 HEK293 EFO EFO_0001182 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 renal cell carcinoma EFO EFO_0000681 HNF4alpha2 transfection embryo EFO EFO_0001367 Analysis of gene expression in human embryonic kidney cells HEK293 overexpressing the transcription factors HNF4a2 or mutant forms HNF4a2 C106R and HNF4a2 R154X, which were introduced by FRT/FLP recombination. The analysis was performed 24 hours following 1µg/ml tetracycline treatment to induce the expression of the genes. Results identify HNF4a regulated genes in kidney cells being several of these genes deregulated in renal cell carcinoma. Keywords = HEK293 Keywords = embryonic kidney cells Keywords = HNF4a2 Keywords = tetracycline Keywords = FRT P-G2700-1 GSE2700GSM52181 sample P-G2700-2 GSE2700GSM52181 extract total_RNA P-G2700-3 GSE2700GSM52181 LE.biotin biotin synthetic_RNA P-G2700-5 HEK293_HNF4a2_1+ A-AFFY-33 tetracycline induced HNF4alpha2 transfection HEK293_HNF4a2_1+ P-G2700-4 E-GEOD-2700-processed-data-1528167209.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-2700/E-GEOD-2700.processed.1.zip
GSE2700GSM52186 HEK293 EFO EFO_0001182 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 renal cell carcinoma EFO EFO_0000681 R154X transfection embryo EFO EFO_0001367 Analysis of gene expression in human embryonic kidney cells HEK293 overexpressing the transcription factors HNF4a2 or mutant forms HNF4a2 C106R and HNF4a2 R154X, which were introduced by FRT/FLP recombination. The analysis was performed 24 hours following 1µg/ml tetracycline treatment to induce the expression of the genes. Results identify HNF4a regulated genes in kidney cells being several of these genes deregulated in renal cell carcinoma. Keywords = HEK293 Keywords = embryonic kidney cells Keywords = HNF4a2 Keywords = tetracycline Keywords = FRT.
Note that files GSM52180.txt and GSM52184.txt as downloaded from GEO are identical. P-G2700-1 GSE2700GSM52186 sample P-G2700-2 GSE2700GSM52186 extract total_RNA P-G2700-3 GSE2700GSM52186 LE.biotin biotin synthetic_RNA P-G2700-5 HEK293_HNF4a2_R154X_6- A-AFFY-33 uninduced R154X transfection HEK293_HNF4a2_R154X_6- P-G2700-4 E-GEOD-2700-processed-data-1528167209.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-2700/E-GEOD-2700.processed.1.zip
GSE2700GSM52183 HEK293 EFO EFO_0001182 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 renal cell carcinoma EFO EFO_0000681 HNF4alpha2 transfection embryo EFO EFO_0001367 Analysis of gene expression in human embryonic kidney cells HEK293 overexpressing the transcription factors HNF4a2 or mutant forms HNF4a2 C106R and HNF4a2 R154X, which were introduced by FRT/FLP recombination. The analysis was performed 24 hours following 1µg/ml tetracycline treatment to induce the expression of the genes. Results identify HNF4a regulated genes in kidney cells being several of these genes deregulated in renal cell carcinoma. Keywords = HEK293 Keywords = embryonic kidney cells Keywords = HNF4a2 Keywords = tetracycline Keywords = FRT P-G2700-1 GSE2700GSM52183 sample P-G2700-2 GSE2700GSM52183 extract total_RNA P-G2700-3 GSE2700GSM52183 LE.biotin biotin synthetic_RNA P-G2700-5 HEK293_HNF4a2_4+ A-AFFY-33 tetracycline induced HNF4alpha2 transfection HEK293_HNF4a2_4+ P-G2700-4 E-GEOD-2700-processed-data-1528167209.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-2700/E-GEOD-2700.processed.1.zip