Comment[ArrayExpressAccession] E-GEOD-2475 Investigation Title SAGE Profiles of Rat Lung Tissues Comment[Submitted Name] SAGE Profiles of Rat Lung Tissues Publication Title Serial analysis of gene expression in a rat lung model of asthma. Use of serial analysis of gene expression to reveal the specific regulation of gene expression profile in asthmatic rats treated by acupuncture. Publication Author List Yin LM, Jiang GH, Wang Y, Wang Y, Liu YY, Jin WR, Zhang Z, Xu YD, Yang YQ Yin LM, Jiang GH, Wang Y, Wang Y, Liu YY, Jin WR, Xu YD, Zhang QH, Yang YQ Publication DOI PubMed ID 18922145 19419550 Experimental Design transcription profiling by SAGE Experimental Design Term Source REF EFO Public Release Date 2005-04-09 Experiment Description Thirty-two SD rats (male, 150 grams, 50days) were randomly divided into four groups: normal control group, asthma group, acupuncture-treated asthma group and acupuncture-treated normal group. The rat lungs were removed immediately after the rats were died. The rat lungs were conserved in liquid nitrogen. SAGE analyses were dependent on the classic protocol (Velculescu VE, et al, Serial Analysis of Gene Expression Detailed Protocol, version 1.0e, 2000) available at the SAGENET website. Keyword = Rat Keyword = Lung Keyword = Asthma Keyword = SAGE Keyword = Acupuncture Keywords: disease state analysis Date of Experiment Term Source Name EFO Term Source Version Term Source File Person Last Name Yang Yang Wang Jiang Wan Wang Liu Jin Zhuang Person First Name Yong Qing Yong-Qing Yan Gong-Hao Ping Yu Yan-Yan Wei-Rong Lei-Jun Person Mid Initials Person Email dryqyang@mail2.online.sh.cn Person Affiliation Shanghai University of Traditional Chinese Medicine Person Phone 86-21-54592134 Person Fax 86-21-54592134 Person Address Shanghai Research Institute of Acupuncture, Shanghai University of Traditional Chinese Medicine, 650 South Wanping Rd , Shanghai, China Person Roles submitter Person Roles Term Source REF Person Roles Term Accession Number Normalization Type Normalization Term Accession Number Normalization Term Source REF Replicate Type Replicate Term Accession Number Replicate Term Source REF Quality Control Type Quality Control Term Accession Number Quality Control Term Source REF Protocol Name P-GSE2475-1 Protocol Description TAG =
COUNT =
TPM = tags per million Protocol Software Protocol Hardware Protocol Contact Protocol Type bioassay_data_transformation Protocol Term Source REF Protocol Term Accession Number Experimental Factor Name Experimental Factor Type Experimental Factor Term Source REF Experimental Factor Term Accession Number Comment[SecondaryAccession] GSE2475 Comment[GEOLastUpdateDate] 2009-05-10 Comment[GEOReleaseDate] 2005-04-08 Comment[ArrayExpressSubmissionDate] 2005-04-01 SDRF File E-GEOD-2475.sdrf.txt