Source Name Characteristics [Organism] Term Source REF Characteristics [Individual] Characteristics [Disease State] Characteristics [Clinical Information] Characteristics [Organism Part] Protocol REF Protocol REF Sample Name Protocol REF Extract Name Material Type Term Source REF Protocol REF Labeled Extract Name Label Material Type Term Source REF Hybridization Name Array Design REF Term Source REF Protocol REF Scan Name Array Data File Comment [ArrayExpress FTP file] Derived Array Data Matrix File Comment [Derived ArrayExpress FTP file] Factor Value[organism part] GSE13471GSM339552 Homo sapiens EFO brain_liver 1 normal obtained post-mortem pre-frontal cortex P-G13471-2 P-G13471-1 GSE13471GSM339552 sample P-G13471-4 GSE13471GSM339552 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339552 LE biotin biotin synthetic_RNA The MGED Ontology brain 1 A-AFFY-33 ArrayExpress P-AFFY-6 GSM339552.CEL GSM339552.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255067.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip pre-frontal cortex GSE13471GSM339553 Homo sapiens EFO brain_liver 2 normal obtained post-mortem pre-frontal cortex P-G13471-2 P-G13471-1 GSE13471GSM339553 sample P-G13471-4 GSE13471GSM339553 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339553 LE biotin biotin synthetic_RNA The MGED Ontology brain 2 A-AFFY-33 ArrayExpress P-AFFY-6 GSM339553.CEL GSM339553.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255067.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip pre-frontal cortex GSE13471GSM339554 Homo sapiens EFO brain_liver 3 normal obtained post-mortem pre-frontal cortex P-G13471-2 P-G13471-1 GSE13471GSM339554 sample P-G13471-4 GSE13471GSM339554 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339554 LE biotin biotin synthetic_RNA The MGED Ontology brain 3 A-AFFY-33 ArrayExpress P-AFFY-6 GSM339554.CEL GSM339554.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255067.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip pre-frontal cortex GSE13471GSM339555 Homo sapiens EFO brain_liver 4 normal obtained post-mortem pre-frontal cortex P-G13471-2 P-G13471-1 GSE13471GSM339555 sample P-G13471-4 GSE13471GSM339555 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339555 LE biotin biotin synthetic_RNA The MGED Ontology brain 4 A-AFFY-33 ArrayExpress P-AFFY-6 GSM339555.CEL GSM339555.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255067.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip pre-frontal cortex GSE13471GSM339556 Homo sapiens EFO brain_liver 5 normal obtained post-mortem pre-frontal cortex P-G13471-2 P-G13471-1 GSE13471GSM339556 sample P-G13471-4 GSE13471GSM339556 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339556 LE biotin biotin synthetic_RNA The MGED Ontology brain 5 A-AFFY-33 ArrayExpress P-AFFY-6 GSM339556.CEL GSM339556.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255067.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip pre-frontal cortex GSE13471GSM339557 Homo sapiens EFO brain_liver 1 normal obtained post-mortem liver P-G13471-2 P-G13471-1 GSE13471GSM339557 sample P-G13471-4 GSE13471GSM339557 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339557 LE biotin biotin synthetic_RNA The MGED Ontology liver 1 A-AFFY-44 ArrayExpress P-AFFY-6 GSM339557.CEL GSM339557.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip liver GSE13471GSM339558 Homo sapiens EFO brain_liver 2 normal obtained post-mortem liver P-G13471-2 P-G13471-1 GSE13471GSM339558 sample P-G13471-4 GSE13471GSM339558 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339558 LE biotin biotin synthetic_RNA The MGED Ontology liver 2 A-AFFY-44 ArrayExpress P-AFFY-6 GSM339558.CEL GSM339558.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip liver GSE13471GSM339559 Homo sapiens EFO brain_liver 3 normal obtained post-mortem liver P-G13471-2 P-G13471-1 GSE13471GSM339559 sample P-G13471-4 GSE13471GSM339559 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339559 LE biotin biotin synthetic_RNA The MGED Ontology liver 3 A-AFFY-44 ArrayExpress P-AFFY-6 GSM339559.CEL GSM339559.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip liver GSE13471GSM339560 Homo sapiens EFO brain_liver 4 normal obtained post-mortem liver P-G13471-2 P-G13471-1 GSE13471GSM339560 sample P-G13471-4 GSE13471GSM339560 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339560 LE biotin biotin synthetic_RNA The MGED Ontology liver 4 A-AFFY-44 ArrayExpress P-AFFY-6 GSM339560.CEL GSM339560.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip liver GSE13471GSM339561 Homo sapiens EFO brain_liver 5 normal obtained post-mortem liver P-G13471-2 P-G13471-1 GSE13471GSM339561 sample P-G13471-4 GSE13471GSM339561 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339561 LE biotin biotin synthetic_RNA The MGED Ontology liver 5 A-AFFY-44 ArrayExpress P-AFFY-6 GSM339561.CEL GSM339561.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip liver GSE13471GSM339562 Homo sapiens EFO tumor_normal 4 colon cancer obtained from colon tumor tissue colon tumor P-G13471-2 P-G13471-1 GSE13471GSM339562 sample P-G13471-4 GSE13471GSM339562 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339562 LE biotin biotin synthetic_RNA The MGED Ontology 4 tumor A-AFFY-44 ArrayExpress P-AFFY-6 GSM339562.CEL GSM339562.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip colon tumor GSE13471GSM339563 Homo sapiens EFO tumor_normal 3 normal obtained from normal colon colon mucosa P-G13471-2 P-G13471-1 GSE13471GSM339563 sample P-G13471-4 GSE13471GSM339563 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339563 LE biotin biotin synthetic_RNA The MGED Ontology 3 normal A-AFFY-44 ArrayExpress P-AFFY-6 GSM339563.CEL GSM339563.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip colon mucosa GSE13471GSM339564 Homo sapiens EFO tumor_normal 4 normal obtained from normal colon colon mucosa P-G13471-2 P-G13471-1 GSE13471GSM339564 sample P-G13471-4 GSE13471GSM339564 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339564 LE biotin biotin synthetic_RNA The MGED Ontology 4 normal A-AFFY-44 ArrayExpress P-AFFY-6 GSM339564.CEL GSM339564.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip colon mucosa GSE13471GSM339565 Homo sapiens EFO tumor_normal 1 colon cancer obtained from colon tumor tissue colon tumor P-G13471-2 P-G13471-1 GSE13471GSM339565 sample P-G13471-4 GSE13471GSM339565 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339565 LE biotin biotin synthetic_RNA The MGED Ontology 1 tumor A-AFFY-44 ArrayExpress P-AFFY-6 GSM339565.CEL GSM339565.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip colon tumor GSE13471GSM339566 Homo sapiens EFO tumor_normal 2 colon cancer obtained from colon tumor tissue colon tumor P-G13471-2 P-G13471-1 GSE13471GSM339566 sample P-G13471-4 GSE13471GSM339566 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339566 LE biotin biotin synthetic_RNA The MGED Ontology 2 tumor A-AFFY-44 ArrayExpress P-AFFY-6 GSM339566.CEL GSM339566.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip colon tumor GSE13471GSM339567 Homo sapiens EFO tumor_normal 3 colon cancer obtained from colon tumor tissue colon tumor P-G13471-2 P-G13471-1 GSE13471GSM339567 sample P-G13471-4 GSE13471GSM339567 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339567 LE biotin biotin synthetic_RNA The MGED Ontology 3 tumor A-AFFY-44 ArrayExpress P-AFFY-6 GSM339567.CEL GSM339567.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip colon tumor GSE13471GSM339568 Homo sapiens EFO tumor_normal 1 normal obtained from normal colon colon mucosa P-G13471-2 P-G13471-1 GSE13471GSM339568 sample P-G13471-4 GSE13471GSM339568 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339568 LE biotin biotin synthetic_RNA The MGED Ontology 1 normal A-AFFY-44 ArrayExpress P-AFFY-6 GSM339568.CEL GSM339568.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip colon mucosa GSE13471GSM339569 Homo sapiens EFO tumor_normal 2 normal obtained from normal colon colon mucosa P-G13471-2 P-G13471-1 GSE13471GSM339569 sample P-G13471-4 GSE13471GSM339569 extract total_RNA The MGED Ontology P-G13471-3 GSE13471GSM339569 LE biotin biotin synthetic_RNA The MGED Ontology 2 normal A-AFFY-44 ArrayExpress P-AFFY-6 GSM339569.CEL GSM339569.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.raw.1.zip E-GEOD-13471-processed-data-1719255073.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-13471/E-GEOD-13471.processed.1.zip colon mucosa