Investigation Title Transcription profiling of human normal primary trophoblasts from placenta Comment[Submitted Name] primary trophoblast study Experimental Design unknown_experiment_design_type transcription profiling by array Experimental Design Term Source REF EFO Comment[ArrayExpressReleaseDate] 2008-06-11 Comment[SecondaryAccession] GSE1302 Comment[AEMIAMESCORE] 3 Comment[ArrayExpressAccession] E-GEOD-1302 Comment[MAGETAB TimeStamp_Version] 2011-01-22 00:01:09 Last Changed Rev: 14857 Experimental Factor Name Experimental Factor Type Experimental Factor Term Source REF Person Last Name Mecham Person First Name Brig Person Mid Initials Person Email bmecham@rics.bwh.harvard.edu Person Phone Person Fax Person Address Harvard Medical School, 20 Shattuck St, Boston, 02115, USA Person Affiliation Harvard Medical School Person Roles submitter Person Roles Term Source REF Quality Control Type Quality Control Term Source REF Replicate Type Replicate Term Source REF Normalization Type Normalization Term Source REF Date of Experiment Public Release Date 2008-06-11 PubMed ID 15161964 Publication DOI 15161964 Publication Author List Brigham H Mecham, Daniel Z Wetmore, Zoltan Szallasi, Yoel Sadovsky, Isaac Kohane, Thomas J Mariani Publication Title Increased measurement accuracy for sequence-verified microarray probes. Publication Status journal_article Publication Status Term Source REF The MGED Ontology Experiment Description Primary cultures of human trophoblasts were established from normal, term placenta. Cells were treated five hours after plating. This sample was treated with 1 uM GW7845. RNA was extracted after 48 hours of treatment using Tri-reagent. Each sample was pooled from three individual placentas prior to target generation. Targets were produced using standard Affymetrix procedures from 30ug of total RNA. Protocol Name Protocol Type Protocol Description Protocol Parameters Protocol Hardware Protocol Software Protocol Contact Protocol Term Source REF SDRF File E-GEOD-1302.sdrf.txt Term Source Name mo The MGED Ontology ArrayExpress EFO The MGED Ontology Term Source File http://mged.sourceforge.net/ontologies/MGEDontology.php http://mged.sourceforge.net/ontologies/MGEDontology.php http://www.ebi.ac.uk/arrayexpress http://www.ebi.ac.uk/efo/ http://mged.sourceforge.net/ontologies/MGEDontology.php Term Source Version