Source Name Characteristics [DevelopmentalStage] Characteristics [Ecotype] Characteristics [ABRC seed stock id] Characteristics [Organism] Term Source REF Term Accession Number Provider Protocol REF Parameter Value [day humidity] Parameter Value [day temperature] Unit [TemperatureUnit] Parameter Value [light intensity] Parameter Value [light hours] Unit [TimeUnit] Parameter Value [night humidity] Parameter Value [media] Parameter Value [light source] Protocol REF Sample Name Protocol REF Parameter Value [Amplification] Parameter Value [Extracted product] Extract Name Material Type Protocol REF Labeled Extract Name Label Material Type Protocol REF Hybridization Name Array Design REF Comment [Array Design URI] Protocol REF Factor Value [compound] Term Source REF Term Accession Number Factor Value [dose] Unit [ConcentrationUnit] Scan Name Array Data File Comment [ArrayExpress FTP file] Arabi_Con1 6 Boyes key Columbia-0 CS60000 Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 ABRC P-CAGE-24580 60 23 degrees_C 200 16 hour 60 542 530 P-CAGE-24581 Arabi_Con1 P-CAGE-24583 RNA polymerases total RNA E_Arabi_Con1 total_RNA P-AFFY-2 L_Arabi_Con1 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v3 H_Arabi_Con1 A-AFFY-16 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-16 P-AFFY-6 ethanol EFO http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:16236 0.1 volume percent H_Arabi_Con1 Arabi_Con1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-2/E-ATMX-2.raw.1.zip Arabi_Con2 6 Boyes key Columbia-0 CS60000 Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 ABRC P-CAGE-24580 60 23 degrees_C 200 16 hour 60 542 530 P-CAGE-24581 Arabi_Con2 P-CAGE-24583 RNA polymerases total RNA E_Arabi_Con2 total_RNA P-AFFY-2 L_Arabi_Con2 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v3 H_Arabi_Con2 A-AFFY-16 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-16 P-AFFY-6 ethanol EFO http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:16236 0.1 volume percent H_Arabi_Con2 Arabi_Con2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-2/E-ATMX-2.raw.1.zip Arabi_MeJA1 6 Boyes key Columbia-0 CS60000 Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 ABRC P-CAGE-24580 60 23 degrees_C 200 16 hour 60 542 530 P-CAGE-24581 Arabi_MeJA1 P-CAGE-24583 RNA polymerases total RNA E_Arabi_MeJA1 total_RNA P-AFFY-2 L_Arabi_MeJA1 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v3 H_Arabi_MeJA1 A-AFFY-16 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-16 P-AFFY-6 methyl jasmonate 100 micromolar H_Arabi_MeJA1 Arabi_MeJA1.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-2/E-ATMX-2.raw.1.zip Arabi_MeJA2 6 Boyes key Columbia-0 CS60000 Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 ABRC P-CAGE-24580 60 23 degrees_C 200 16 hour 60 542 530 P-CAGE-24581 Arabi_MeJA2 P-CAGE-24583 RNA polymerases total RNA E_Arabi_MeJA2 total_RNA P-AFFY-2 L_Arabi_MeJA2 biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v3 H_Arabi_MeJA2 A-AFFY-16 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-16 P-AFFY-6 methyl jasmonate 100 micromolar H_Arabi_MeJA2 Arabi_MeJA2.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-2/E-ATMX-2.raw.1.zip