Filter search results

 
 
Page 1..45678..131
Page size 2550100250500
Showing 2501 - 3000 of 65092 experiments
AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
MicroRNAs among esophageal cancer cell sublines with different migration ability
transcription profiling by array
Homo sapiens
4
31/12/2015
-
10
-
Expression data among esophageal cancer cell sublines with different migration ability
transcription profiling by array
Homo sapiens
8
31/12/2015
12
-
ADAR1 regulates the resistance of melanoma cells to T cells via miR-222 and ICAM1
transcription profiling by array
Homo sapiens
13
31/12/2015
13
-
Expression data from OSKM-mediated 2nd reprogramming cells and the corresponding iPS cell line
transcription profiling by array
Mus musculus
18
31/12/2015
11
-
miRNA expression profiles of pediatric medulloblastoma
transcription profiling by array
Homo sapiens
29
31/12/2015
25
-
Genome-wide map of Six4 in C2C12 cells 24 hours post-differentiation
ChIP-seq
Mus musculus
7
31/12/2015
-
9
-
The transcriptional landscape of early pancreatic development
transcription profiling by array
Mus musculus
21
31/12/2015
11
-
Overlapping and distinct roles of LIN28 paralogs in reprogramming and stem cell metabolism
transcription profiling by array
Mus musculus
8
31/12/2015
-
16
-
A transcriptional signature of fatigue derived from patients with primary Sjögren's Syndrome
transcription profiling by array
Homo sapiens
160
31/12/2015
-
32
-
The choroid plexus transcriptome reveals changes in type I and II interferon responses in a mouse model of Alzheimer's disease
transcription profiling by array
Mus musculus
24
31/12/2015
-
24
-
Neuroblastoma cell line gene expression profiling
transcription profiling by array
Homo sapiens
10
31/12/2015
30
-
Gene expression profiling on C3H/10T1/2 fibroblasts during their myogenic conversion in case of Six4 ablation
transcription profiling by array
Mus musculus
12
31/12/2015
11
-
Circadian rhythm in NIH3T3 cells
RNA-seq of coding RNA
Mus musculus
18
31/12/2015
-
ENA
15
-
Gene expression analysis to characterize similarities and differences in T. canis- or T. cati-induced neurotoxocarosis
transcription profiling by array
Mus musculus
20
31/12/2015
6
-
Molecular Determinants for RNA Polymerase II Elongation Rate and Acceleration
ChIP-seq, RNA-seq of coding RNA
Homo sapiens, Mus musculus
48
31/12/2015
-
89
-
Identification of immediate early genes that are involved in G0-G1 transition of hepatocytes after injury by use of an ex vivo liver slice system
transcription profiling by array
Mus musculus
1
31/12/2015
14
-
Effect of DBC1/CCAR2 knockout on global gene expression in SW480 cells
transcription profiling by array
Homo sapiens
6
31/12/2015
13
-
Chip-chip of Sir3 and of Sir2, and ChAP-chip of AAR from budding yeast cells
ChIP-chip by tiling array
Saccharomyces cerevisiae
11
31/12/2015
15
-
Similarities and Distinctions in Actions of Surface-Directed and Classic Androgen Receptor Antagonists
transcription profiling by array
Homo sapiens
18
31/12/2015
-
11
-
Chip-seq analysis of hrpRSL and Lon in Pseudomonas syringas
ChIP-seq
Pseudomonas syringae
10
31/12/2015
-
ENA
7
-
Hox binding in Drosophila third instar larval wing imaginal discs
ChIP-chip by tiling array
Drosophila melanogaster
9
31/12/2015
-
7
-
LncRNA in pediatric AML vs normal bone marrow mononuclear cells
transcription profiling by array
Homo sapiens
6
31/12/2015
17
-
Genomic Run On (GRO): determination of the nascent transcriptional rates in a series of a mex67 mutant
transcription profiling by array
Saccharomyces cerevisiae S288c
6
31/12/2015
8
-
Genomic Run On (GRO): determination of the nascent transcriptional rates in a series of Hrp1 mutants
transcription profiling by array
Saccharomyces cerevisiae
6
31/12/2015
7
-
Gene regulation during differentiation of ovarian cancer stem cells
transcription profiling by array
Homo sapiens
8
31/12/2015
16
-
miRNA expression data from mouse fetus ear (pinnae) and back tissues
transcription profiling by array
Mus musculus
11
31/12/2015
12
-
Gene expression of human peripheral blood cells of patients with rheumatoid arthritis
transcription profiling by RT-PCR
Homo sapiens
120
31/12/2015
-
56
-
Gene expression of human peripheral blood cells of patients with rheumatoid arthritis [dataset 2]
transcription profiling by RT-PCR
Homo sapiens
60
31/12/2015
-
15
-
Expression data from the inducible expression of EWS-FLI1 (EF) in embryoid bodies
transcription profiling by array
Homo sapiens
9
31/12/2015
16
-
Small RNAs in stress-related rice cultivars
RNA-seq of non coding RNA
Oryza sativa
3
31/12/2015
-
25
-
Vascular niche induction of hematopoietic progenitors from pluripotent stem cells
RNA-seq of coding RNA
Homo sapiens, Macaca nemestrina
5
31/12/2015
-
25
-
Gene expression of human peripheral blood cells of patients with rheumatoid arthritis [dataset 1]
transcription profiling by RT-PCR
Homo sapiens
60
31/12/2015
-
11
-
Expression profile of HCT116 cells treated with TNF-α/IFN-ɣ, both TNF-α/IFN-ɣ and silibinin, and without treatment
transcription profiling by array
Homo sapiens
6
31/12/2015
-
8
-
Oxidative stress alters miRNA and gene expression profiles in villous first trimester trophoblasts
transcription profiling by RT-PCR
Homo sapiens
2
31/12/2015
-
8
-
Genomic Run On (GRO): determination of the nascent transcriptional rates and mRNA levels in several yeast mutants (SAC3, SUS1, SRC1)
transcription profiling by array
Saccharomyces cerevisiae
9
31/12/2015
6
-
Genomic Run On (GRO): determination of the nascent transcriptional rates and mRNA levels in several yeast mutants (PUB1 and NGR1)
transcription profiling by array
Saccharomyces cerevisiae
8
31/12/2015
10
-
Deficits in histone acetylation and methylation are restricted to specific loci in Huntington's disease models
ChIP-seq
Mus musculus
3
31/12/2015
-
12
-
The dynamics of chromatin accessibility during EMT
methylation profiling by array
Homo sapiens
16
31/12/2015
-
12
-
Haploinsufficiency of interstitial genes between TMPRSS2 and ERG contributes to prostate tumorigenesis
transcription profiling by array
Mus musculus
9
31/12/2015
6
-
Expression data from heart muscle of cardiac-specific caspase-3 and -7 knockout and wild type newborn and young mice
transcription profiling by array
Mus musculus
24
31/12/2015
10
-
Core oxidative stress response (COSR) in Aspergillus nidulans
transcription profiling by array
Aspergillus nidulans
14
31/12/2015
14
-
Relative spatial homogeneity revealed by transcriptional profiling of multi-region medulloblastoma samples
transcription profiling by array
Homo sapiens
52
31/12/2015
17
-
Relative spatial heterogeneity revealed by transcriptional profiling of multi-region high-grade glioma samples
transcription profiling by array
Homo sapiens
20
31/12/2015
24
-
Palmitate-induced gene expression in human gingival fibroblasts (HGF)
transcription profiling by array
Homo sapiens
4
31/12/2015
10
-
Gene Expression and HD-SNP6.0 data from Primary Testicular (PTL), Primary Central Nervous System Lymphoma (PCNSL) and Primary Mediastinal B-cell Lymphoma (PMLBCL)
transcription profiling by array, comparative genomic hybridization by array
Homo sapiens
260
31/12/2015
21
-
Epigenome analysis of peripheral blood mononuclear cell (PBMC) samples from obstructive sleep apnea patients and healthy subjects
methylation profiling by array
Homo sapiens
21
31/12/2015
-
11
-
Gene expression of 7 day combinatorial yohimbine and imipramine treated rat hippocampi
transcription profiling by array
Rattus norvegicus
8
31/12/2015
14
-
Changes in gene expression associated with overexpression of a novel oncogene
transcription profiling by array
Homo sapiens
8
31/12/2015
25
-
Prediction of isolated central nervous system relapses in pediatric acute lymphoblastic leukemia
transcription profiling by array
Homo sapiens
50
31/12/2015
15
-
Expression profiling of long noncoding RNAs and mRNAs in mouse plasma
transcription profiling by array
Mus musculus
2
31/12/2015
6
-
Gene expression profile from short-term caloric restriction in mouse adipose tissue
transcription profiling by array
Mus musculus
12
31/12/2015
14
Drug specific epigenetic reprogramming leads to increased cellular invasion in ERα positive breast cancer via de novo cholesterol biosynthesis
ChIP-seq
Homo sapiens
6
31/12/2015
-
16
-
miRNA expression in healthy carriers of heterozygous BRCA1 mutation and healthy WT controls
transcription profiling by array
Homo sapiens
21
31/12/2015
11
-
Effect of BRCA1 heterozygous mutation on gene expression
transcription profiling by array
Homo sapiens
21
31/12/2015
17
-
Metabolic reprogramming of triple-negative breast cancer and melanoma cell lines by the Let-7a microRNA
transcription profiling by array
Homo sapiens
6
31/12/2015
-
25
-
Single-base resolution DNA methylation maps of rice cultivars under control and stress conditions
methylation profiling by high throughput sequencing
Oryza sativa
7
31/12/2015
-
14
-
Stress responsive gene expression in rice cultivars
RNA-seq of coding RNA
Oryza sativa
7
31/12/2015
-
48
-
Epo-Induced Erythroid Maturation Is Dependent on Plcγ1 Signaling
methylation profiling by high throughput sequencing
Mus musculus
6
31/12/2015
ENA
8
-
Curcumin Effectively Depletes Hepatic Cancer Stem-Like Cells
transcription profiling by array
Homo sapiens
30
31/12/2015
-
26
-
Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
RNA-seq of coding RNA
Arabidopsis thaliana
36
31/12/2015
-
34
-
D9, a novel 3-Deazaneplanocin A (DZNep) analog, is efficacious in targeting acute myeloid leukemia (AML) (Chemotherapy)
transcription profiling by array
Homo sapiens
6
31/12/2015
-
10
-
D9, a novel 3-Deazaneplanocin A (DZNep) analog, is efficacious in targeting acute myeloid leukemia (AML) (Sensitive vs Resistance)
transcription profiling by array
Homo sapiens
17
31/12/2015
-
12
-
Expression data from MCF7 breast epithelial cells in normoxic and hypoxic conditions
transcription profiling by array
Homo sapiens
4
31/12/2015
24
-
Alteration of gene expression in MCF-7 cells induced by king cobra venom L-amino acid oxidase (OH-LAAO)
transcription profiling by array
Homo sapiens
4
31/12/2015
-
10
-
Activation of IFN/STAT1 signaling is a hallmark of response to chemotherapy in patient-derived xenografts of triple-negative breast cancer
transcription profiling by array
Homo sapiens
28
31/12/2015
33
-
Expression data from breast cancer tumors treated with a single window of the antiangiogenic agent Sunitinib
transcription profiling by array
Homo sapiens
31
31/12/2015
39
-
Gene expression signature associated with BRAFV600E mutation in human papillary thyroid carcinoma based on transgenic mouse model
transcription profiling by array
Homo sapiens, Mus musculus
83
31/12/2015
17
-
Gene expression signature associated with BRAFV600E mutation based on transgenic mouse model (mouse)
transcription profiling by array
Mus musculus
38
31/12/2015
7
-
Gene expression signature associated with BRAFV600E mutation in human papillary thyroid carcinoma based on transgenic mouse model (human)
transcription profiling by array
Homo sapiens
45
31/12/2015
15
-
Muscle transcriptome analysis of mouse models of partial trisomy and monosomy 21
transcription profiling by array
Mus musculus
23
31/12/2015
-
12
-
Long non-coding Satellite III RNAs link the heat shock response and cell proliferation
transcription profiling by array
Homo sapiens
22
31/12/2015
-
14
-
Gene expression profile of gastric cancer stem cells after CD44 knockdown
transcription profiling by array
Homo sapiens
2
31/12/2015
17
-
Characterization of porcine chromosomal regions harboring QTL for water holding capacity of meta by tiling arrays and mRNA-seq
RNA-seq of coding RNA
Sus scrofa
12
31/12/2015
-
10
-
Genomic Run On (GRO): determination of the nascent transcriptional rates and mRNA levels in several yeast mutants
transcription profiling by array
Saccharomyces cerevisiae
18
31/12/2015
11
-
Effect of electromagnetic fields on the chondrogenic differentiation under microgravity conditions
transcription profiling by array
Homo sapiens
6
31/12/2015
12
-
The Wilms' tumor blastema propagating cell is a self-renewing committed epithelial stem cell
transcription profiling by array
Homo sapiens
8
31/12/2015
12
-
Identification of gene expression patterns in lymphoma-prone SJL mice of different ages
transcription profiling by array
Mus musculus
22
31/12/2015
8
-
Functional splicing network reveals extensive regulatory plasticity of the core Spliceosomal machinery
transcription profiling by array
Homo sapiens
18
31/12/2015
-
10
-
Pharmacodynamic effects of GLP-1 agonist liraglutide in adolescent, prediabetic pigs
transcription profiling by array
Sus scrofa
16
31/12/2015
10
-
the nuclear receptor tailless promotes increase of neurogenesis after stroke
transcription profiling by array
Mus musculus
10
31/12/2015
-
6
-
Effect of nutritive conditions, adhesion and EMT on transcriptional profile of HMECs transduced by an oncogene RAS and SNAI1, SNAI2 or SNAI3
transcription profiling by array
Homo sapiens
24
31/12/2015
-
16
-
To screen miRNA expression of SP and MP cells in mutiply myeloma by miRNA array
transcription profiling by array
Homo sapiens
4
31/12/2015
16
-
eIF4E hypersensitive mRNA translation is characterized by long and structured untranslated regions
transcription profiling by array
Mus musculus
50
31/12/2015
-
10
-
ZEB1 expression prevents DNA replication stress in cancer stem cells and delays chromosomal instability
transcription profiling by array, comparative genomic hybridization by array
Homo sapiens
18
31/12/2015
18
-
ZEB1 expression prevents DNA replication stress in cancer stem cells and delays chromosomal instability [Agilent]
comparative genomic hybridization by array
Homo sapiens
15
31/12/2015
25
-
CPC+AC0-Gene DNA Methylation Data from Illumina 450k
methylation profiling by array
Homo sapiens
143
31/12/2015
-
12
-
Jmjd3-mediated H3K27me3 dynamics orchestrate brown fat cell fate transition and regulate white fat plasticity
ChIP-seq
Mus musculus
4
31/12/2015
ENA
7
-
Nutrigenomics and nutritional analysis of juvenile Asian seabass (Lates Calcarifer) fed five different commercial feeds
transcription profiling by array
Lates calcarifer
24
31/12/2015
10
-
Gene expression profilings of normal human oral keratinocyte (HOK) and dysplastic oral keratinocyte cell line from a heavy smoker (DOK)
transcription profiling by array
Homo sapiens
4
31/12/2015
-
18
-
Next Generation Sequencing facilitates analysis of gene expression from Rehmannia glutinosa associated with replanting disease
RNA-seq of coding RNA
Rehmannia glutinosa
2
31/12/2015
-
11
-
Transcription profiling by array of drought-stress response in wild type and mutant rice
transcription profiling by array
Oryza sativa Japonica Group
12
31/12/2015
38
MtrA is involved in progression of Mycobacterium tuberculosis cell cycle
transcription profiling by array
Mycobacterium tuberculosis H37Rv
18
31/12/2015
15
-
MicroRNA and gene expression profiling of primary human hepatocytes after berberine chloride treatment
transcription profiling by array
Homo sapiens
24
31/12/2015
6
-
Gene expression profiling of primary human hepatocytes after berberine chloride treatment
transcription profiling by array
Homo sapiens
18
31/12/2015
8
-
MicroRNA expression profiling of primary human hepatocytes after berberine chloride treatment
transcription profiling by array
Homo sapiens
6
31/12/2015
7
-
Genome-wide profiling of histone H3 lysine 27 and lysine 4 trimethylation in multiple myeloma reveals the importance of Polycomb gene targeting and highlights EZH2 as a potential therapeutic target [Seq]
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
16
31/12/2015
-
27
-
RNAseq analysis of mature thymic NKT cells and immature thymic DN1eP cells
RNA-seq of coding RNA
Mus musculus
26
31/12/2015
-
14
-
Microarray analysis of thyrospheres from human THJ-11T cells
transcription profiling by array
Homo sapiens
6
31/12/2015
18
-
Pathway analysis of microRNA expression profile during murine osteoclastogenesis
transcription profiling by array
Mus musculus
12
31/12/2015
11
-
PARVB overexpression increases migration capability and defines high risks for endophytic growth and metastasis in tongue squamous cell carcinoma
transcription profiling by array
Homo sapiens
27
31/12/2015
20
-
High throughput screening of lipopolysaccharide treatment in nasal fibroblast
transcription profiling by array
Homo sapiens
4
31/12/2015
10
-
Tight Junction Protein 1 is a Modulator and Biomarker of Proteasome Inhibitor Sensitivity in Multiple Myeloma
transcription profiling by array
Homo sapiens
4
31/12/2015
16
-
Differential expression of mRNAs in porcine endometrium
transcription profiling by array
Sus scrofa
18
31/12/2015
11
-
Global Analysis of the Transcriptional Response of Chinese cabbage (Brassica rapa ssp. pekinensis) to Methyl Jasmonate Reveals JA Signaling on Enhancement of Secondary Metabolism Pathways
RNA-seq of coding RNA
Brassica rapa subsp. pekinensis
2
31/12/2015
-
15
-
Potential biomarkers tah could help to determine the prognosis of azoospermia treatment
transcription profiling by array
Homo sapiens
12
31/12/2015
27
-
Sox2 signature in SHH medulloblastomas
transcription profiling by array
Homo sapiens
83
31/12/2015
27
-
Transcriptome analysis of annotated coding genes and sORF under elevated CO2
transcription profiling by array
Arabidopsis thaliana
32
31/12/2015
28
-
SYNTHESIS OF THE INTERSPECIES SIGNALING MOLECULE AUTOINDUCER-2 PLAYS AN IMPORTANT ROLE IN THE ANTI-MICROBIAL EFFECT OF BIFIDOBACTERIA
transcription profiling by array
Bifidobacterium breve UCC2003
1
31/12/2015
11
-
Factors affecting the gene expression of in vitro cultured human preimplantation embryos
transcription profiling by array
Homo sapiens
37
31/12/2015
7
-
Discovery of novel and differentially expressed microRNAs between fetal and adult backfat in cattle
RNA-seq of non coding RNA
Bos taurus
3
31/12/2015
-
8
-
Gene Expression Profile of Deletion RAD50, MRE11, XRS2
transcription profiling by array
Saccharomyces cerevisiae
5
31/12/2015
-
12
-
Novel critical insights into the mechanism of cell-based therapy after myocardial infarction
transcription profiling by array
Homo sapiens
9
31/12/2015
16
-
Evaluation of ribonucleic acid amplification protocols for human oocyte transcriptome analysis
transcription profiling by array
Homo sapiens
16
31/12/2015
18
-
Staphylococcus aureus ST398 gene expression profiling during ex vivo colonization of porcine nasal epithelium
transcription profiling by array
Staphylococcus aureus
24
31/12/2015
8
-
Gene expression changes in Apc-mutant mouse intestinal organoids 7 and 20 days after the induction of the Apc deletion
transcription profiling by array
Mus musculus
8
31/12/2015
-
10
-
Streptococcus suis 05ZY: control vs contact with hBMEC 3 h
transcription profiling by array
Streptococcus suis 05ZYH33
4
31/12/2015
11
-
Streptococcus suis 05ZY: control vs contact with hBMEC 1 h
transcription profiling by array
Streptococcus suis 05ZYH33
4
31/12/2015
13
-
Contact inhibition controls miR-223 stabilization via p27kip1 expression
transcription profiling by array
Mus musculus
16
31/12/2015
8
-
Epigenome analysis of primary MCL
methylation profiling by array
Homo sapiens
173
31/12/2015
-
11
-
Identification of microRNAs in Caragana intermedia by high-throughput sequencing and expression analysis of 12 microRNAs and their targets under salt stress
RNA-seq of non coding RNA
Caragana korshinskii
1
31/12/2015
-
11
-
Identification of copy number variations by array comparative genomic hybridization in multi-ethnic multiple myeloma patients
comparative genomic hybridization by array
Homo sapiens
63
31/12/2015
10
-
Mapping N6-methyladenosine methylome in mouse embryonic stem cells
other
Mus musculus
12
31/12/2015
ENA
6
-
Transcriptomic Dynamics of Human Macrophage Response to Leishmania major infection
transcription profiling by array
Homo sapiens
27
31/12/2015
16
-
ERK activation, gene dysregulations and cell transformation at submicromolar doses of Cr6+ in C3H10T1/2 and BALB/c 3T3 cells: interaction with Lipoic acid
transcription profiling by array
Mus musculus
3
31/12/2015
11
-
Modulation of T cell responses by type I interferons
transcription profiling by array
Mus musculus
8
31/12/2015
14
-
Expression data from miR-224 expressing cells versus control cells
transcription profiling by array
Homo sapiens
6
31/12/2015
10
Gene signature of the post-Chernobyl papillary thyroid cancer
transcription profiling by array
Homo sapiens
116
31/12/2015
20
-
HIV-1 TAT SUPPRESSES THE TCR/CD3 MACHINERY IN HUMAN CD4+ T CELLS [HIV]
transcription profiling by array
Homo sapiens
4
31/12/2015
26
-
HIV-1 TAT SUPPRESSES THE TCR/CD3 MACHINERY IN HUMAN CD4+ T CELLS [Tat]
transcription profiling by array
Homo sapiens
6
31/12/2015
10
-
Expression data from S. cerevisiae
transcription profiling by array
Saccharomyces cerevisiae
14
31/12/2015
20
-
HIV-1 TAT SUPPRESSES THE TCR/CD3 MACHINERY IN HUMAN CD4+ T CELLS
transcription profiling by array
Homo sapiens
10
31/12/2015
10
-
Human induced pluripotent stem cells derived from a sporadic Alzheimer's disease patient
transcription profiling by array
Homo sapiens
8
31/12/2015
26
-
In-depth analysis of microRNA in bat hibernating regulation
RNA-seq of non coding RNA
Myotis ricketti
4
31/12/2015
-
12
-
Cumulative low doses of the organic pesticide rotenone in the adult rat substantia nigra pars compacta
transcription profiling by array
Rattus norvegicus
6
31/12/2015
13
-
The Arabidopsis DRYK, AtYAK1 regulates the development of the male gametophyte
transcription profiling by array
Arabidopsis thaliana
6
31/12/2015
25
-
The transcriptome of TRPV1-positive sensory neurons revealed by subgroup-elimination transcriptomics
RNA-seq of coding RNA
Rattus norvegicus
18
30/12/2015
-
ENA
52
-
Pilot KOMP knockout mouse strains
RNA-seq of coding RNA
Mus musculus
15
28/12/2015
-
ENA
26
Transcriptional response of Arabidopsis thaliana in systemic acquired resistance: critical roles for pipecolic acid and salicylic acid
RNA-seq of coding RNA
Arabidopsis thaliana
48
27/12/2015
-
ENA
199
-
Tma108, a putative M1 aminopeptidase, is involved in ribosome specialization in Saccharomyces cerevisiae
RIP-chip by array
Saccharomyces cerevisiae
8
24/12/2015
-
63
-
RIP-chip analysis of Tma108, Scp160, Tma46 or Rpl16 immunoprecipitation in Saccharomyces cerevisiae
RIP-chip by array
Saccharomyces cerevisiae
8
24/12/2015
-
48
-
Genome-wide distribution of histones modifications in mouse ESC Rif1+/+ and Rif1-/-
ChIP-seq
Mus musculus
20
24/12/2015
-
ENA
75
-
Replication timing profiles of Rif1 inducible knock-out embryonic stem cells
tiling path by array
Mus musculus
6
24/12/2015
63
-
Chromosome conformation capture in Rif1 null pMEFs
DNA-seq
Mus musculus
20
24/12/2015
ENA
51
-
Gene expression profiles of Rif1 inducible knock-out embryonic stem cells
transcription profiling by array
Mus musculus
16
24/12/2015
79
Genome-wide occupancy of Rif1FH in mouse ESC
ChIP-seq
Mus musculus
10
24/12/2015
ENA
84
-
Gene expression profiles of Rif1 conditional knock-out large T immortalized mouse embryonic fibroblast
transcription profiling by array
Mus musculus
12
24/12/2015
52
Chromosome conformation capture in mouse embryonic Rif1 null stem cells
DNA-seq
Mus musculus
20
24/12/2015
ENA
64
-
Transcriptome profiling of Bma1 knock out mouse by RNASeq
RNA-seq of coding RNA
Mus musculus
16
24/12/2015
-
ENA
88
-
Transcription profiling by array of yeast single and double deletion mutants of gene-specific transcription factors
transcription profiling by array
Saccharomyces cerevisiae
287
24/12/2015
40
-
Analysis of mRNA of leukocytes before and after exercise in 3 warmblood horses
transcription profiling by array
Equus caballus
6
24/12/2015
18
-
Parallel single-cell bisulfite- and RNA-sequencing link transcriptional and epigenetic heterogeneity
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Mus musculus
192
24/12/2015
-
25
-
Identification of drugs that enhance skin repair using dermal stem cell-based screens
transcription profiling by array
Mus musculus, Rattus norvegicus
24
24/12/2015
17
-
Identification of drugs that enhance skin repair using dermal stem cell-based screens [Rat]
transcription profiling by array
Rattus norvegicus
12
24/12/2015
13
-
Probing the regulatory effects of specific mutations in three major binding domains of the pleiotropic regulator CcpA of Bacillus subtilis
transcription profiling by array
Bacillus subtilis
24
24/12/2015
14
-
Parallel single-cell bisulfite- and RNA-sequencing link transcriptional and epigenetic heterogeneity [Bisulfite-Seq]
methylation profiling by high throughput sequencing
Mus musculus
96
24/12/2015
-
23
-
Transcriptomic response of Saccharomyces cerevisiae in mixed-culture wine fermentation with Hanseniaspora guilliermondii
transcription profiling by array
Saccharomyces cerevisiae
16
24/12/2015
15
-
FOXD3 is a novel tumor suppressor in lung cancer
RNA-seq of coding RNA
Homo sapiens
6
24/12/2015
-
35
-
Blood gene expression at 3 months post-transplantation predicts 1-year histologic features in renal transplantation
transcription profiling by array
Homo sapiens
79
24/12/2015
15
-
Genome-Wide Identification of microRNAs and Their Targets in Cold-Stored Potato Tubers by Deep Sequencing and Degradome Analysis
RNA-seq of coding RNA, RNA-seq of non coding RNA
Solanum tuberosum
4
24/12/2015
-
17
-
Transcription profiling by array of yeast single and double deletion mutants of gene-specific transcription factors
transcription profiling by array
Saccharomyces cerevisiae
287
24/12/2015
18
-
Comprehensive genomic analysis identify novel subtypes and targets of triple-negative breast cancer
transcription profiling by array
Homo sapiens
265
23/12/2015
205
-
Integration of ATAC-seq and RNA-seq Identifies Human Alpha Cell and Beta Cell Signature Genes
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
23
23/12/2015
-
59
-
Gene profiling of Tregs across inbred strains
transcription profiling by array
Mus musculus
13
23/12/2015
15
-
Gene expression profiling of Bone Marrow FoxP3+ Treg cells
transcription profiling by array
Mus musculus
5
23/12/2015
11
-
miRNA expression profiling in prostate cancer and non-neoplastic tissues
transcription profiling by array
Homo sapiens
64
23/12/2015
-
29
-
PNAs-A15 effects on cervical cancer cells line
transcription profiling by array
Homo sapiens
4
23/12/2015
-
16
-
Grape skin transcriptome to reveal genes related with resveratrol accumulation
RNA-seq of coding RNA
Vitis quinquangularis, Vitis vinifera
24
23/12/2015
-
14
-
Expression data from Pseudomonas aeruginosa ∆sbrR and ∆sbrIR mutants versus wild type
transcription profiling by array
Pseudomonas aeruginosa PAO1
8
23/12/2015
12
-
Gene expression profiling in 38 JMML patients and 9 healthy donors (Validation cohort)
transcription profiling by array
Homo sapiens
47
23/12/2015
61
-
Gene expression profiling of 44 JMML patients and 7 healthy donors (discovery cohort)
transcription profiling by array
Homo sapiens
51
23/12/2015
16
-
Insulator dysfunction and oncogene activation in IDH mutant gliomas
ChIP-seq
Homo sapiens
33
23/12/2015
-
27
-
Intrinsic age-dependent changes and cell-cell contacts regulate nephron progenitor lifespan
RNA-seq of coding RNA
Mus musculus
91
23/12/2015
-
18
-
Unique cell cycle-dependent variations in the pluripotent epigenetic landscape define novel cohorts of temporal expressed bivalent genes during hESCs differentiation
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
24
23/12/2015
-
14
-
Gene expression profiles in the liver of obese AIM+/+ and AIM-/- mice
transcription profiling by array
Mus musculus
8
23/12/2015
10
-
Expression data from Arabidopsis root tips rRBr mutant
transcription profiling by array
Arabidopsis thaliana
13
23/12/2015
18
-
Distinctive responses of Mycobacterium smegmatis to exposure of low and high levels of hydrogen peroxide
RNA-seq of coding RNA
Mycobacterium smegmatis str. MC2 155
3
22/12/2015
-
ENA
97
-
GENE EXPRESSION ANALYSIS OF SYNOVIAL BIOPSIES AND PERIPHERAL BLOOD SAMPLES FROM PSORIATIC ARTHRITIS
transcription profiling by array
Homo sapiens
20
22/12/2015
77
Functional and molecular characterization of mouse Gata2-independent hematopoietic progenitors
RNA-seq of coding RNA
Mus musculus
2
22/12/2015
-
11
-
AGM hematopoietic stem cells are differentially regulated by BMP and Hedgehog signalling pathways
RNA-seq of coding RNA
Mus musculus
18
22/12/2015
-
13
-
Identification of genes involved in the anti-inflammatory effects of berberine in DNP-activated mouse MC/9 mast cells
transcription profiling by array
Mus musculus
4
22/12/2015
12
-
A microfluidic platform enabling single cell RNA-seq of multigenerational lineages
RNA-seq of coding RNA
Mus musculus
194
22/12/2015
-
ENA
27
-
Pervasive polymorphic imprinted methylation in the human placenta
methylation profiling by array
Homo sapiens
79
22/12/2015
26
-
Expanding the CTD code: methylation of non-consensus Lysine residues marks early transcription in mammalian cells
ChIP-seq
Mus musculus
2
22/12/2015
ENA
11
-
Advancing Trypanosoma brucei genome annotation through ribosome profiling and spliced leader mapping
RNA-seq of coding RNA
Trypanosoma brucei
22
22/12/2015
ENA
12
-
Truncation of LOC100288798 (SLC38A4-AS) lncRNA in human haploid KBM7 cell line
RNA-seq of coding RNA
Homo sapiens
8
22/12/2015
-
ENA
14
-
Transcriptome profiling of nasal polyp derived human IL17RB positive and negative T-helper cells
transcription profiling by array
Homo sapiens
12
22/12/2015
20
-
RNA-seq analyses of kdm5 mutant flies and wt flies under normal condition and oxidative stress
RNA-seq of coding RNA
Drosophila melanogaster
4
22/12/2015
ENA
14
-
Genome-wide maps of KDM5 binding in drosophila adults
ChIP-seq
Drosophila melanogaster
9
22/12/2015
ENA
9
-
Age, sexual dimorphism and disease associations in the developing human fetal lung transcriptome
transcription profiling by array
Homo sapiens
316
22/12/2015
21
-
In vitro effect of the integrine LAMA4 on motility and cluster formation of human chondrocytes
transcription profiling by array
Homo sapiens
16
22/12/2015
10
-
Growth-rate dependency of de novo resveratrol production in chemostat cultures of an engineered Saccharomyces cerevisiae strain
transcription profiling by array
Saccharomyces cerevisiae
16
22/12/2015
11
-
Proteogenomics analysis reveals specific genomic orientations at distal regulatory regions composed by non-canonical histone variants
ChIP-seq
Homo sapiens
4
22/12/2015
-
ENA
9
-
Loss of MEN1 activates DNMT1 implicating DNA hypermethylation as a driver of MEN1 tumorigenesis
methylation profiling by high throughput sequencing
Homo sapiens
38
22/12/2015
ENA
15
-
Expression data of worms under different caloric restriction mimetic treatments
transcription profiling by array
Caenorhabditis elegans
15
22/12/2015
18
-
Next generation sequencing of miRNAs in folic acid-induced kidney damage
RNA-seq of non coding RNA
Mus musculus
21
22/12/2015
-
ENA
14
-
Exogenous rescue of KLHL9 in SF210 cell line
RNA-seq of coding RNA
Homo sapiens
9
22/12/2015
-
ENA
14
-
Expression data of Myh6-MeCP2 transgenic mice
transcription profiling by array
Mus musculus
7
22/12/2015
14
Cardiac gene expression after transgenic overexpression or deletion of MeCP2 in cardiomyocytes
transcription profiling by array
Mus musculus
49
22/12/2015
-
13
-
The homeobox transcription factor Nkx2-1 regulates microRNAs controlling downstream gene silencing in lung epithelial cells
transcription profiling by array
Mus musculus
12
22/12/2015
11
-
The homeobox transcription factor Nkx2-1 regulates microRNAs controlling downstream gene silencing in lung epithelial cells (mRNA)
transcription profiling by array
Mus musculus
6
22/12/2015
11
-
The homeobox transcription factor Nkx2-1 regulates microRNAs controlling downstream gene silencing in lung epithelial cells (microRNA)
transcription profiling by array
Mus musculus
6
22/12/2015
10
-
Expression data from Amacr knock-out mouse liver and intestine
transcription profiling by array
Mus musculus
32
22/12/2015
13
-
Expression data from Amacr knock-out mouse intestine
transcription profiling by array
Mus musculus
24
22/12/2015
11
-
Expression data from Amacr knock-out mouse liver
transcription profiling by array
Mus musculus
8
22/12/2015
10
-
Transcription profiling by array of antibody blockade of IL-17-family cytokines in immunity to acute murine oral mucosal candidiasis
transcription profiling by array
Mus musculus
35
21/12/2015
-
67
RNA-seq analysis to investigate the downstream genes of EXB1 in Arabidopsis
RNA-seq of coding RNA
Arabidopsis thaliana
2
21/12/2015
-
ENA
85
-
A nutritionally-enhanced oil from transgenic Camelina sativa effectively replaces marine fish oil as a source of eicosapentaenoic acid for farmed Atlantic salmon (Salmo salar)
transcription profiling by array
Salmo salar
18
21/12/2015
-
72
-
ChIP-seq analysis of MBD3 in human breast cancer cells
ChIP-seq
Homo sapiens
2
21/12/2015
ENA
10
-
Gene expression profiling for 4 Zebrafish samples
transcription profiling by array
Danio rerio
4
21/12/2015
14
-
Metabolic re-programming of pancreatic cancer mediated by CDK4/6 inhibition elicits unique vulnerabilities
transcription profiling by array
Homo sapiens
6
21/12/2015
-
19
-
Identifying transcription start sites and active enhancer elements using BruUV-seq
RNA-seq of coding RNA
Homo sapiens
9
21/12/2015
ENA
13
-
Histone deacetylase inhibitors antagonize distinct pathways to suppress tumorigenesis of embryonal rhabdomyosarcoma
transcription profiling by array
Homo sapiens
12
21/12/2015
23
-
TB disease classification
transcription profiling by RT-PCR
Homo sapiens
189
21/12/2015
-
15
-
Gene expression data from wild-type (WT) and ribbon (rib) mutant Drosophila mid through late stage embryos
transcription profiling by array
Drosophila melanogaster
6
21/12/2015
12
-
A Systems Approach to Understanding Human Rhinovirus and Influenza Virus Infection
transcription profiling by array
Homo sapiens
186
21/12/2015
24
-
Gene expression profiles in lymph nodes with metastasis of oral squamous cell carcinoma (OSCC)
transcription profiling by array
Homo sapiens
13
21/12/2015
-
24
-
Neurospora MUS-30 is an LSH/DDM1 homolog required for normal genome maintenance
methylation profiling by high throughput sequencing
Neurospora crassa
7
21/12/2015
ENA
13
-
Next Generation Sequencing Facilitates Quantitative Analysis of RNAs bound by DDX5 and RORgt in cultured T helper 17 cell [RIP-seq]
RNA-seq of coding RNA
Mus musculus
4
21/12/2015
-
ENA
14
-
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type, DDX5 knockout, RORc knockout, RmrpG262T knockin T helper 17 cell Transcriptomes [RNA-seq]
RNA-seq of coding RNA
Mus musculus
7
21/12/2015
ENA
10
-
A western-style diet, with and without chronic androgen treatment, alters the number, structure and function of small antral follicles in ovaries of young adult monkeys
transcription profiling by array
Macaca mulatta
9
21/12/2015
11
-
Telomere Binding Protein TRB1 Preferentially Associates with Promoters of Translation Machinery genes
ChIP-seq
Arabidopsis thaliana
4
21/12/2015
-
ENA
54
-
Linker histone H1.2 establishes chromatin comapction and gene silencing through recognition of H3K27me3
transcription profiling by array
Homo sapiens
6
21/12/2015
-
21
-
Renal Cell Carcinomas in Vinylidene Chloride Exposed Male B63FC1 Mice Are Characterized by Oxidative Stress and TP53 Overexpression
transcription profiling by array
Mus musculus
18
21/12/2015
15
-
Genome-wide analysis of DNA methylation and gene expression patterns in purified, uncultured human liver cells and activated hepatic stellate cells
methylation profiling by array
Homo sapiens
10
21/12/2015
25
-
Genome wide promoter methylation analysis of mouse macrophages and endothelial cells isolated from ischemic hindlimbs using RRBS sequencing
methylation profiling by high throughput sequencing
Mus musculus
18
21/12/2015
-
ENA
11
-
LOXL2 dependent genes in RA induced mES differentiation
transcription profiling by array
Mus musculus
12
21/12/2015
10
-
Retinoic acid signaling coordinates the behavior of multiple cell lineages during cardiac outflow morphogenesis
transcription profiling by array
Mus musculus
8
21/12/2015
14
-
Global gene expression profiling of mouse soleus hindlimb muscle following gradual exposure to hypoxia
transcription profiling by array
Mus musculus
16
21/12/2015
11
-
Gene expression and alternative splicing data from human cartilage endplate-derived stem cells
transcription profiling by array
Homo sapiens
6
21/12/2015
11
-
Hyperosmotic-induced changes in lymphoid cell gene expression
transcription profiling by array
Mus musculus
6
21/12/2015
11
-
Disrupting SUMOylation potentiates transactivation function and ameliorates polyglutamine AR-mediated disease
RNA-seq of coding RNA
Mus musculus
12
21/12/2015
-
ENA
10
-
mRNA sequence data of individual Drosophila melanogaster male and female flies from 16 Drosophila Genetic Reference Panel lines reared in replicated environments
RNA-seq of coding RNA
Drosophila melanogaster
851
21/12/2015
-
ENA
12
-
NFAT-dependent IL-2 and IL-23 produced by DC are key regulators of pathogenic TH17-mediated lung inflammation
transcription profiling by array
Mus musculus
57
21/12/2015
22
-
mRNA/microRNA expression profiles of HCC or CCC patients' liver, together with those of non-tumor part tissues
transcription profiling by array
Homo sapiens
64
21/12/2015
106
-
FJ004: Dopaminergic subset specification as a model for molecular mechanisms of neuronal vulnerability in Parkinson's Disease
transcription profiling by array
Mus musculus
6
21/12/2015
12
-
Growth signals employ CGGBP1 to suppress transcription of Alu-SINEs [Affymetrix]
transcription profiling by array
Homo sapiens
12
21/12/2015
10
-
Effect of floT and floA mutations on the global transcriptome of Bacillus subtilis NCIB3610
transcription profiling by array
Bacillus subtilis
9
21/12/2015
12
-
Analyses of lung early responses to RSV in the neonatal environment reveal key roles for DC and type I IFN in controlling immunopathologic imprinting
transcription profiling by array
Mus musculus
16
21/12/2015
12
-
Genome wide DNA methylation sequencing of ischemic skeletal muscle from normal, hyperlipidemic and type 2 diabetic mice
methylation profiling by high throughput sequencing
Mus musculus
3
21/12/2015
ENA
11
-
Expression data from Arabidopsis thaliana treated with NO donor SNP, compared to NO depletion by cPTIO
transcription profiling by array
Arabidopsis thaliana
9
21/12/2015
17
TRANSCRIPTIONAL CHANGES IN HARD CLAM (MERCENARIA MERCENARIA) IN RESPONSE TO QPX DISEASE AND TEMPERATURE
transcription profiling by array
Mercenaria mercenaria
30
20/12/2015
-
10
-
Zscan10 is dispensable for maintenance of pluripotency in mouse embryonic stem cells
RNA-seq of coding RNA
Mus musculus
6
20/12/2015
ENA
10
-
Gene expression of M. acetivorans producing ANME-1 Mcr during growth on methane vs. growth on methanol
RNA-seq of coding RNA
Methanosarcina acetivorans
6
20/12/2015
-
ENA
12
-
A serum microRNA panel as potential biomarkers for hepatocellular carcinoma related with hepatitis B virus
RNA-seq of non coding RNA
Homo sapiens
3
20/12/2015
-
ENA
26
-
Trancriptome-wide association of Not1and Polysomal occupancy in wt and not5 background
RIP-seq
Saccharomyces cerevisiae
17
19/12/2015
-
ENA
57
-
microRNA sequencing in rat cardiac fibroblasts and fibroblast-derived exosomes
RNA-seq of non coding RNA
Rattus norvegicus
6
19/12/2015
-
ENA
18
-
Cause and consequence of tethering a sub-TAD to different nuclear compartments
other
Mus musculus
45
19/12/2015
ENA
10
-
Different gene expression signatures in children and adults with celiac disease
transcription profiling by RT-PCR
Homo sapiens
31
19/12/2015
-
14
-
Testing the Kinship Theory of Intragenomic Conflict in Honey Bees (Apis mellifera)
RNA-seq of coding RNA
Apis mellifera
25
19/12/2015
-
ENA
15
-
Global gene expression in response to genetic and growth factor manipulation of TWIST1 expression and function
transcription profiling by array
Homo sapiens
4
19/12/2015
16
-
The porcine microRNA transcriptome response to porcine cytomegalovirus infection
RNA-seq of non coding RNA
Sus scrofa
12
19/12/2015
-
ENA
13
-
Changes in transcriptome during excisional cutaneous murine wound healing
transcription profiling by array
Mus musculus
6
19/12/2015
19
-
Genome-wide mapping of retinoblastoma (Rb) binding sites in prostate cancer cell lines VCaP and LNCaP
ChIP-seq
Homo sapiens
2
19/12/2015
ENA
14
-
Metabolic stress is a barrier to Epstein-Barr virus mediated B-cell immortalization
transcription profiling by array
Homo sapiens
6
19/12/2015
17
-
Effect of Ets1 knockdown in the P5424 thymic cell line
ChIP-seq
Mus musculus
5
19/12/2015
ENA
12
-
Gene expression analysis of Ets1-/- CD4+ CD8+ thymocytes
transcription profiling by array
Mus musculus
6
19/12/2015
11
-
In utero caffeine exposure alters DNA methylation patterns in adult hearts
methylation profiling by array
Mus musculus
4
19/12/2015
13
-
Transcription profiling by array of primary murine bone marrow stem cells stimulated with Receptor activator of nuclear factor kappa B ligand (RANKL) and DMSO (control) or Oleg Federov compound no. 1 (OF-1)
transcription profiling by array
Mus musculus
12
18/12/2015
65
-
Models of Human Core Transcriptional Regulatory Circuitries
ChIP-seq
Homo sapiens
2
18/12/2015
ENA
13
-
Gene expression data of canine cancer cell lines and osteosarcoma primary tumors
transcription profiling by array
Canis lupus familiaris
62
18/12/2015
26
-
Gene expression data of canine osteosarcoma primary tumors (Affymetrix Canine 2.0 array)
transcription profiling by array
Canis lupus familiaris
33
18/12/2015
11
-
Gene expression of FACC canine cancer cell line panel (Affymetrix Canine 2.0 array)
transcription profiling by array
Canis lupus familiaris
29
18/12/2015
14
-
Comprehensive genomic analysis identify novel subtypes and targets of triple-negative breast cancer (198 TNBC tumors)
transcription profiling by array
Homo sapiens
198
18/12/2015
78
-
Genome-wide DNA methylation profiling in the superior temporal gyrus reveals epigenetic signatures associated with Alzheimer's disease
methylation profiling by array
Homo sapiens
68
18/12/2015
-
26
-
CFTR is a tumor suppressor gene in murine and human intestinal cancer
transcription profiling by array, RNA-seq of coding RNA
Mus musculus
80
18/12/2015
24
-
mESCs cultured in microfluidic chambers take control of their fate by producing endogenous signals including LIF
transcription profiling by array
Mus musculus
2
18/12/2015
10
-
Loss of motoneuron-specific microRNA-218 causes systemic neuromuscular failure
RNA-seq of coding RNA, RNA-seq of non coding RNA
Mus musculus
21
18/12/2015
-
27
-
Loss of motoneuron-specific microRNA-218 causes systemic neuromuscular failure [miRNA-seq]
RNA-seq of non coding RNA
Mus musculus
7
18/12/2015
-
ENA
29
-
Loss of motoneuron-specific microRNA-218 causes systemic neuromuscular failure [RNA-seq]
RNA-seq of coding RNA
Mus musculus
14
18/12/2015
ENA
28
-
BET bromodomain inhibitors synergize with ATR inhibitors to induce DNA damage, apoptosis, senescence-associated secretory pathway and ER stress in Myc- induced lymphoma cells
transcription profiling by array
Mus musculus
8
18/12/2015
11
-
Molecular Profiling of Metastatic Prostate Carcinoma Reveals Substantial Inter-individual and Limited Intra-individual Diversity: Implications for Precision Oncology
transcription profiling by array
Homo sapiens
171
18/12/2015
35
-
Mechanisms of phenanthrene toxicity in the soil invertebrate Enchytraeus crypticus
transcription profiling by array
Enchytraeus crypticus
24
18/12/2015
-
17
-
EP400 Deposits H3.3 into Promoters and Enhancers During Gene Activation
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
19
18/12/2015
ENA
12
-
Quantitative BrdU immunoprecipitation method demonstrates that Fkh1 and Fkh2 are rate-limiting activators of replication origins that reprogram replication timing in G1 phase (BrdU)
other, RNA-seq of coding RNA
Saccharomyces cerevisiae
64
18/12/2015
-
ENA
11
-
A Novel Human Leiomyoma Tissue Derived Matrix for Cell Culture Studies
transcription profiling by array
Homo sapiens
2
18/12/2015
13
-
Gene expression profiling of human neuroblastoma cell line BE(2)-C with inducible KDM4C expression
transcription profiling by array
Homo sapiens
6
18/12/2015
15
-
Investigating pathogen defense mechanisms of porcine mammary epithelial cells in vitro
transcription profiling by array
Sus scrofa
45
18/12/2015
10
-
High-throughput sequencing of small RNAs (18-30 nt) from wild-type and diabetic mouse liver
RNA-seq of non coding RNA
Mus musculus
2
18/12/2015
ENA
10
-
Transcription profiling of human primary osteoblasts to study the effect of direct or indirect co-culture with human umbilical vein endothelial cells
transcription profiling by array
Homo sapiens
9
17/12/2015
-
78
Transcriptional profiling by array of M2 mammosphere-derived MCF-7 cells treated with CAF-CM or adipocyte-CM or leptin
transcription profiling by array
Homo sapiens
12
17/12/2015
-
71
-
Transcriptional response of yeast cells upon high-level expression of modified GFPs
transcription profiling by array
Saccharomyces cerevisiae
7
17/12/2015
58
-
Gene expression changes during development of sunitinib resistance in renal cell carcinoma patient derived xenografts
transcription profiling by array
Homo sapiens, Mus musculus
40
17/12/2015
81
-
The zinc finger protein Mig1 regulates mitochondrial function and azole drug susceptibility in the pathogenic fungus Cryptococcus neoformans
transcription profiling by array
Cryptococcus neoformans
4
17/12/2015
-
11
-
Pathways of retinoid synthesis in mouse macrophages and bone marrow cells
transcription profiling by array
Mus musculus
6
17/12/2015
55
-
Human Papillary thyroid cancer cell line, BCPAP control vs. miR-146b-5p mimic transfected
transcription profiling by array
Homo sapiens
1
17/12/2015
59
-
MLL-rearranged acute lymphoblastic leukemias upregulate BCL-2 through H3K79 methylation and are highly sensitive to the BCL-2 specific antagonist ABT-199
ChIP-seq
Homo sapiens
14
17/12/2015
-
66
-
The alarmin IL-33 amplifies an immune response in the degenerating retina
transcription profiling by array
Mus musculus
30
17/12/2015
-
22
-
A Dicer-Independent Route for Biogenesis of siRNAs that Direct DNA Methylation in Arabidopsis
methylation profiling by high throughput sequencing, RNA-seq of non coding RNA
Arabidopsis thaliana
76
17/12/2015
-
40
-
Gene expression of Listeria monocytogenes-infected HepG2 hepatocellular carcinoma in the presense of IL-17Aand IL-22
transcription profiling by array
Homo sapiens
2
17/12/2015
26
-
Identification and characterization of MCF01A circular RNAs
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
2
17/12/2015
-
23
-
Identification and characterization of MCF01A circular RNAs [ChIP-seq]
ChIP-seq
Homo sapiens
1
17/12/2015
ENA
10
-
Identification and characterization of MCF01A circular RNAs [RNA-seq]
RNA-seq of coding RNA
Homo sapiens
1
17/12/2015
ENA
11
-
NSD3-short is an adaptor protein that couples BRD4 to the CHD8 chromatin remodeler
ChIP-seq, RNA-seq of coding RNA
Mus musculus
22
17/12/2015
-
29
-
NSD3-short is an adaptor protein that couples BRD4 to the CHD8 chromatin remodeler (ChIP-Seq)
ChIP-seq
Mus musculus
9
17/12/2015
-
29
-
CRISPR-Cas9 combinatorial KO of epigenetic regulators in human ovarian cancer cells
RNA-seq of coding RNA
Homo sapiens
12
17/12/2015
ENA
22
-
Regulation of gene expression by WAC/RNF20/RNF40 in HEK293A cells
transcription profiling by array
Homo sapiens
11
17/12/2015
-
31
-
Expression data for human nasopharyngeal carcinoma cell line HK1 stimulated with EGF or TGF-β recombinant protein
transcription profiling by array
Homo sapiens
3
17/12/2015
38
-
Systematic Comparison of Mouse and Human Oral Squamous Cell Carcinoma by Using Functional Transcriptomic Analysis
transcription profiling by array
Mus musculus
12
17/12/2015
-
28
-
Divergent transcriptional activation by glucocorticoids in mouse and human macrophages is the result of gain and loss of enhancers
ChIP-seq, transcription profiling by array
Homo sapiens, Mus musculus
52
17/12/2015
16
-
Expression response of human monocyte derived macrophages to dexamethasone over a 24h time series
transcription profiling by array
Homo sapiens
24
17/12/2015
17
-
Expression data from a 24h time series of dexamethasone treatment for mouse bone marrow derived macrophages
transcription profiling by array
Mus musculus
18
17/12/2015
23
-
Different reprogramming methods generate undistinguishable pluripotent states
transcription profiling by array
Mus musculus
26
17/12/2015
-
20
-
RNA-seq of chicken small non coding RNA collected from a variety of tissues from one male and one female healthy 2-year-old red jungle fowls to study tissue and sex specific expression
RNA-seq of non coding RNA
Gallus gallus
27
16/12/2015
-
ENA
144
-
Gene expression alterations in SoxC knockdown sea urchin embryos
RNA-seq of coding RNA
Strongylocentrotus purpuratus
2
16/12/2015
-
59
-
transCONFIRM gene expression analysis
transcription profiling by array
Homo sapiens
113
16/12/2015
51
-
Expression data of cDNA from the ACHN control and Kindlin-2-depleting cells
transcription profiling by array
Homo sapiens
2
16/12/2015
25
-
Combinatorial Control of RBP-jk and EBF1 Chromosome Occupancy induced by viral co-activator EBNA2
ChIP-seq, transcription profiling by array
Homo sapiens
18
16/12/2015
-
26
-
Combinatorial Control of RBP-jk and EBF1 Chromosome Occupancy induced by viral co-activator EBNA2 [ChIP-seq]
ChIP-seq
Homo sapiens
12
16/12/2015
-
22
-
Time Course of Adults Vaccinated with Influenza TIV Vaccine 2009-2012
transcription profiling by array
Homo sapiens
621
16/12/2015
21
-
Time Course of Adults Vaccinated with Influenza TIV Vaccine during 2010/11 Flu Season (FluCenter cohort)
transcription profiling by array
Homo sapiens
75
16/12/2015
22
-
Time Course of Adults Vaccinated with Influenza TIV Vaccine during 2010/11 Flu Season (HIPC cohort)
transcription profiling by array
Homo sapiens
286
16/12/2015
19
-
Time Course of Adults Vaccinated with Influenza TIV Vaccine during 2009/10 Flu Season
transcription profiling by array
Homo sapiens
83
16/12/2015
18
-
NSD1 Mutations Generate a Genome-Wide DNA Methylation Signature
methylation profiling by array
Homo sapiens
122
16/12/2015
34
-
The transcriptional coregulator PGC-1β controls mitochondrial function and anti-oxidant defense in skeletal muscles
transcription profiling by array
Mus musculus
2
16/12/2015
20
-
Comparison of gene expression by sheep and human blood stimulated with the TLR4 agonists lipopolysaccharide and monophosphoryl lipid A
transcription profiling by array
Homo sapiens, Ovis aries
36
16/12/2015
16
-
Comparison of gene expression by sheep and human blood stimulated with the TLR4 agonists lipopolysaccharide and monophosphoryl lipid A [sheep]
transcription profiling by array
Ovis aries
18
16/12/2015
16
-
Comparison of gene expression by sheep and human blood stimulated with the TLR4 agonists lipopolysaccharide and monophosphoryl lipid A [human]
transcription profiling by array
Homo sapiens
18
16/12/2015
17
-
The life history of retrocopies illuminates the evolution of new mammalian genes
RNA-seq of coding RNA
Pongo pygmaeus
2
16/12/2015
-
21
-
Genome-wide tissue gene expression profiling in Juvenile Göttingen Minipigs with customized Agilent microarrays
transcription profiling by array
Sus scrofa
80
16/12/2015
36
-
Genome-wide tissue gene expression profiling in 1 year old Göttingen Minipigs with customized NimbleGen microarrays
transcription profiling by array
Sus scrofa
188
16/12/2015
39
-
Identification of genes associated with breast cancer micrometastatic disease in bone marrow disseminated tumor cells (DTCs)
transcription profiling by array
Homo sapiens
128
16/12/2015
104
-
A single 3D chromatin compartment in amphioxus Hox cluster suggests a stepwise evolutionary origin for vertebrate Hox bimodal regulatory topologies
other, ChIP-seq
Branchiostoma lanceolatum, Danio rerio
74
16/12/2015
-
19
-
Competition between DNA methylation and transcription factors determines binding of NRF1
ChIP-seq, methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Homo sapiens, Mus musculus
48
16/12/2015
-
420
-
Contributions of microbiome and mechanical deformation to intestinal bacterial overgrowth and inflammation in a human gut-on-a-chip
transcription profiling by array
Homo sapiens
6
16/12/2015
45
-
Identification of a mitochondrial defect gene signature reveals NUPR1 as a key regulator of liver cancer progression
transcription profiling by array
Homo sapiens
15
16/12/2015
-
40
-
Beyond acid suppression: Novel therapeutic targets for gastro-esophageal reflux disease based on a murine model
transcription profiling by array
Rattus norvegicus
40
16/12/2015
18
-
Beyond acid suppression: Novel therapeutic targets for gastro-esophageal reflux disease based on a murine model (whole blood)
transcription profiling by array
Rattus norvegicus
20
16/12/2015
18
-
Beyond acid suppression: Novel therapeutic targets for gastro-esophageal reflux disease based on a murine model (esophageal tissue)
transcription profiling by array
Rattus norvegicus
20
16/12/2015
18
-
Expression profile analysis of macrosclereid cell development in Medicago truncatula
transcription profiling by array
Medicago truncatula
23
16/12/2015
27
-
A multi-protein occupancy map of the mRNP on the 3' end of histone mRNAs
other
Homo sapiens
27
16/12/2015
15
-
RIP-seq of polyribosomal SLBP RNP
other
Homo sapiens
6
16/12/2015
-
16
-
HITS-CLIP of cytoplasmic SLBP RNP
other
Homo sapiens
6
16/12/2015
-
15
-
Anti-SLBP RIPchip data
other
Homo sapiens
15
16/12/2015
15
-
Small molecule-induced bioenergetic reprogramming directs prostate cancer inhibition via UPR signaling
transcription profiling by array
Homo sapiens
12
16/12/2015
-
23
-
Identification of genes involved in apoptosis-induced by cold atmospheric pressure plasma in human lymphoma U937 cells
transcription profiling by array
Homo sapiens
6
15/12/2015
30
-
CFTR is a tumor suppressor gene in murine and human intestinal cancer [microarray]
transcription profiling by array
Mus musculus
12
15/12/2015
29
-
Targeted Pten deletion plus p53-R270H mutation in mouse mammary epithelium induces aggressive claudin-low and basal-like breast cancer
transcription profiling by array
Mus musculus
31
15/12/2015
88
-
Transcriptional Response to Ciprofloxacin in Enteropathogenic Escherichia coli Deng
transcription profiling by array
Escherichia coli
15
15/12/2015
21
-
Endothelin-1 supports clonal derivation and expansion of cardiovascular progenitors derived from human embryonic stem cells
transcription profiling by array
Homo sapiens
18
15/12/2015
-
24
-
Development of gene expression signature for primary epidermal neonatal keratinocytes treated with mature IL-36B cytokine
transcription profiling by array
Homo sapiens
4
15/12/2015
16
-
TELP, a sensitive and versatile library construction method for next-generation sequencing
ChIP-seq, RNA-seq of coding RNA
Mus musculus
23
15/12/2015
-
17
-
Elevated MTSS1 mRNA Expression Is Associated with Metastasis and Poor Prognosis of Residual Hepatitis B-related Hepatocellular Carcinoma
transcription profiling by array
Homo sapiens
20
15/12/2015
38
-
mRNA-seq data of 14 days old Arabidopsis seedlings in Col-0 and At rz-1b At rz-1c double mutant
RNA-seq of coding RNA
Arabidopsis thaliana
4
15/12/2015
-
25
-
HSB-2 cells stably expressing LDB1 or mutant LDB1 proteins
RNA-seq of coding RNA
Homo sapiens
10
15/12/2015
-
ENA
18
-
Expression data from Hand2 mutant mouse embryos
transcription profiling by array
Mus musculus
4
15/12/2015
16
-
Inhibiting Fungal Multidrug Resistance by Disrupting an Activator-Mediator Interaction With the Small Molecule iKIX1
RNA-seq of coding RNA
Candida glabrata, Saccharomyces cerevisiae
24
15/12/2015
ENA
21
-
The binding specificity and regulatory effect of WT and redesigned Puf2p
other, RNA-seq of coding RNA
Saccharomyces cerevisiae
23
15/12/2015
-
16
-
The binding specificity and regulatory effect of WT and redesigned Puf2p [CLIP-Seq]
other
Saccharomyces cerevisiae
12
15/12/2015
ENA
15
-
The binding specificity and regulatory effect of WT and redesigned Puf2p [RNA-Seq]
RNA-seq of coding RNA
Saccharomyces cerevisiae
11
15/12/2015
ENA
16
-
TGFβ confers resistance to radiotherapy in non-small cell lung cancer
transcription profiling by array
Mus musculus
12
15/12/2015
22
-
Human skeletal muscle gene expression analysis on Lean, obese insulin sensitive, obese insulin resistant and obese Type II diabetic subjects
transcription profiling by array
Homo sapiens
28
15/12/2015
35
-
Spo11-oligo mapping in S. cerevisiae Ctf19/CCAN kinetochore sub-complex mutant mcm21
other
Saccharomyces cerevisiae
2
15/12/2015
ENA
16
-
Reconstruction of microRNA/genes transcriptional regulatory networks of multiple myeloma through in silico integrative genomics analysis
transcription profiling by array
Homo sapiens
154
15/12/2015
71
-
Signaling through MyD88 in bone marrow-derived cells promotes gastric tumorigenesis by inducing the TLR2/CD14 pathway in tumor cells
RNA-seq of coding RNA
Mus musculus
15
15/12/2015
-
ENA
17
-
ChIP-Seq experiments to analyse Rec8 and Zip1 localisation in Ctf19c mutants during meiotic prophase
ChIP-seq
Saccharomyces cerevisiae
12
15/12/2015
-
15
-
Rec8 ChIP-Seq experiment to analyse cohesin localisation in the Ctf19c mutants during meiotic prophase
ChIP-seq
Saccharomyces cerevisiae
6
15/12/2015
-
17
-
ChIP-Seq experiment to analyse Zip1 localisation in the Ctf19c mutants during meiotic prophase
ChIP-seq
Saccharomyces cerevisiae
6
15/12/2015
-
15
-
Methyl-CpG-binding domain (MBD) sequencing of 15 primary stage 4S neuroblastoma tumors
methylation profiling by high throughput sequencing
Homo sapiens
30
15/12/2015
ENA
18
-
Genome wide profiling of Su(H) [CSL] binding in Drosophila melanogaster larval CNSs where Notch is hyperactive in neuroblasts for 24 hours
ChIP-chip by tiling array
Drosophila melanogaster
3
15/12/2015
9
-
Embryonic transcription is controlled by maternally defined chromatin state
ChIP-seq, methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Xenopus (Silurana) tropicalis
72
15/12/2015
ENA
10
-
Evaluation of Inter-Batch Differences in Stem-Cell Derived Neurons
methylation profiling by array
Homo sapiens
35
15/12/2015
-
15
-
IRF4, a master transcription factor, regulates genes involved in BCR signaling, antigen processing and presentation, and GC development
transcription profiling by array, ChIP-chip by tiling array
Homo sapiens
5
15/12/2015
18
-
IRF4, a master transcription factor, regulates genes involved in BCR signaling, antigen processing and presentation, and GC development [expression array]
transcription profiling by array
Homo sapiens
2
15/12/2015
20
-
IRF4, a master transcription factor, regulates genes involved in BCR signaling, antigen processing and presentation, and GC development [ChIP-chip]
ChIP-chip by tiling array
Homo sapiens
3
15/12/2015
20
-
Genome-wide analysis of miR-552-3p- and miR-608-mediated gene silencing in A549 lung cancer cells
transcription profiling by array
Homo sapiens
6
15/12/2015
-
24
-
Expression data from prostate tumors of TRAMPxPWK/PhJ F2 cross
transcription profiling by array
Mus musculus
27
15/12/2015
17
-
Elucidating microRNA regulatory networks using transcriptional, post-transcriptional and histone modification measurements
ChIP-seq, RNA-seq of coding RNA
Mus musculus
8
15/12/2015
-
9
-
H3K27ac ChIP in Dicer KO/WT [ChIP-seq]
ChIP-seq
Mus musculus
2
15/12/2015
-
ENA
11
-
Dicer WT/KO MSC RNA-Seq [total RNA]
RNA-seq of coding RNA
Mus musculus
6
15/12/2015
ENA
19
-
RNA-seq of IL-4 stimulated human keratinocytes
RNA-seq of coding RNA
Homo sapiens
14
15/12/2015
-
ENA
31
-
Expression profiles of HepG2 cells treated with low-, high-dose of acetaminophen and solvent control
transcription profiling by array
Homo sapiens
36
15/12/2015
35
-
Role of interferon-alpha in the activation of tubular epithelial cell in lupus nephritis (LN)
transcription profiling by array
Homo sapiens
6
15/12/2015
-
38
-
Isolation and characterization of Renal Cancer Stem Cells (RCSCs) obtained from clear cell renal cell carcinoma (cc-RCC)
transcription profiling by array
Homo sapiens
18
15/12/2015
-
20
-
FOXM1 ChIP-seq in an OE33 cell line
ChIP-seq
Homo sapiens
4
14/12/2015
ENA
82
-
The propagation of perturbations in shuffled bacterial gene networks
transcription profiling by array
Escherichia coli str. K-12 substr. MG1655
260
14/12/2015
162
-
Genomic binding profiles of ERa in MCF-7 and T47D control or enhancer588-targeted cells
ChIP-seq
Homo sapiens
6
14/12/2015
-
ENA
16
-
Expression analysis of Acacia koa in response to mechanical stimuli
transcription profiling by array
Acacia koa
4
14/12/2015
17
-
Gene expression analysis to identify target genes activated after preBCR signaling
RNA-seq of coding RNA
Mus musculus
16
14/12/2015
-
ENA
16
-
Gene expression analysis to identify Mef2c/d target genes in B-cell progenitors
RNA-seq of coding RNA
Mus musculus
6
14/12/2015
-
ENA
16
-
Gene expression analysis to identify Klf2 target genes in B-cell progenitors [Klf2_KO]
RNA-seq of coding RNA
Mus musculus
4
14/12/2015
-
ENA
15
-
Gene expression analysis to identify Klf2 target genes in B-cell progenitors [+Klf2]
RNA-seq of coding RNA
Mus musculus
8
14/12/2015
-
ENA
16
-
Genome-wide mapping of Mef2c-bound sites in early B-cell progenitors
ChIP-seq
Mus musculus
4
14/12/2015
-
ENA
17
-
The effects of CEP-37440, an inhibitor of focal adhesion kinase, in vitro and in vivo on inflammatory breast cancer cells
transcription profiling by array
Homo sapiens
4
14/12/2015
31
-
RIP-Chip analysis of the C. elegans FOG-1 and FOG-3 proteins
other
Caenorhabditis elegans
40
14/12/2015
15
-
Tissue Transcriptome Driven Identification of Epidermal Growth Factor as a Chronic Kidney Disease Biomarker
transcription profiling by array
Homo sapiens
42
14/12/2015
87
-
H3K4me3 modification profiling of Huntingtons disease and control human post-mortem prefrontal cortex brain samples
ChIP-seq
Homo sapiens
13
14/12/2015
ENA
17
-
Sumoylation coordinates repression of inflammatory and anti-viral gene programs during innate sensing
ChIP-seq, transcription profiling by array
Mus musculus
32
14/12/2015
15
-
H3K4me3 chromatin profiling in SUMOylation-competent and -deficient bone marrow derived dendritic cells unstimulated or stimulated with LPS
ChIP-seq
Mus musculus
6
14/12/2015
ENA
15
-
SUMO and RNAPolII chromatin profiling in SUMOylation-competent and -deficient bone marrow derived dendritic cells unstimulated or stimulated with LPS
ChIP-seq
Mus musculus
10
14/12/2015
ENA
9
-
Sumoylation-deficient bone marrow derived dendritic cells transcriptomic analysis after LPS stimulation
transcription profiling by array
Mus musculus
18
14/12/2015
10
-
Gene expression profiling of normal murine lung cells, K-RasG12V driven lung hyperplasias and full-blown lung adenocarcinomas
transcription profiling by array
Mus musculus
30
14/12/2015
51
-
Gene expression profiling of advanced murine K-RasG12V lung adenocarcinomas
transcription profiling by array
Mus musculus
15
14/12/2015
21
-
Gene expression profiling of normal lung cells and K-RasG12V driven hyperplasias
transcription profiling by array
Mus musculus
15
14/12/2015
25
-
Antibody-based selective isolation of atrial and ventricular cardiomyocytes by differential expression of integrin α6 (CD49f)
transcription profiling by array
Mus musculus
16
14/12/2015
15
-
Tet1 plays an essential oncogenic role in MLL-rearranged leukemia
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Mus musculus
9
14/12/2015
ENA
16
-
Interleukin-10-anergized T-cell infusion provides immune reconstitution without severe graft-versus-host disease after haploidentical hematopoietic stem cell transplantation
transcription profiling by array
Homo sapiens
36
14/12/2015
22
-
Map of DnaC localization in the presence or absence of PcrA (PcrA depletion)
ChIP-seq
Bacillus subtilis subsp. subtilis str. JH642
4
13/12/2015
ENA
19
-
Dynamically reorganized chromatin is the key for the reprogramming of somatic cells to pluripotent cells
ChIP-seq, RNA-seq of coding RNA
Mus musculus
27
13/12/2015
ENA
56
-
Transcription profiling by array of apical progenitors from wild type and NestinCre:Mbd3Flox/Flox mouse embryos to identify gene expression changes dependent upon a functional NuRD complex
transcription profiling by array
Mus musculus
24
12/12/2015
51
-
LncVSM (AK098656) up/down-regulation in Vascular Smooth Muscle cells
transcription profiling by array
Homo sapiens
8
12/12/2015
10
-
IL-4 orchestrates STAT6-mediated DNA demethylation leading to dendritic cell differentiation
transcription profiling by array, methylation profiling by array
Homo sapiens
29
12/12/2015
18
-
Expression data on human MO-to-DC and MO-to-MAC differentiation
transcription profiling by array
Homo sapiens
14
12/12/2015
18
-
Methylation data and effect of JAK3 inhibition on human MO-to-DC and MO-to-MAC differentiation
methylation profiling by array
Homo sapiens
15
12/12/2015
-
17
-
A PTIP-PA1 subcomplex promotes transcription for IgH class-switching independently from the associated MLL3/MLL4 methyltransferase complex
ChIP-seq
Mus musculus
4
12/12/2015
-
18
-
Expression data from UKRV-Mel-15a melanoma-derived clones resistant to cytolysis mediated by Melan-A/MART1 (26-35) cytotoxic T lymphocytes (CTL)
transcription profiling by array
Homo sapiens
4
12/12/2015
25
-
Oviductal expression data from wild type and Wt1 heterozygous mice
transcription profiling by array
Mus musculus
6
12/12/2015
15
-
Gene expression profile of two colorectal cancer HT29 and DLD-1 cell lines treated with single or fractionated ionizing radiation doses under 3D cell culture conditions
transcription profiling by array
Homo sapiens
18
12/12/2015
17
-
Expression data from U937 cells infected by hsa-miR-608 inhibitor virus
transcription profiling by array
Homo sapiens
6
12/12/2015
15
-
Molecular patterns of diffuse and nodular parathyroid hyperplasia in long-term hemodialysis
transcription profiling by array
Homo sapiens
29
12/12/2015
-
9
-
Development of gene expression signatures for knockdown of synthetic lethal gene
transcription profiling by array
Homo sapiens
14
12/12/2015
17
-
Circular RNAs are enriched in anucleate platelets and are a signature of transcriptome degradation
RNA-seq of coding RNA
Homo sapiens
1
12/12/2015
ENA
35
-
miR-23~27~24 clusters control effector T cell differentiation and function
RNA-seq of coding RNA
Mus musculus
18
11/12/2015
-
ENA
20
-
H3K27me3 histone modification in A549 cells
ChIP-seq
Homo sapiens
2
11/12/2015
ENA
17
-
The LIM homeodomain transcription factor Lhx2 is required for Müller glia development in the vertebrate retina
RNA-seq of coding RNA
Mus musculus
6
11/12/2015
ENA
99
-
Gene expression profiling of tumor cells and M2 macrophages from WT mice and mice with deletion of integrin beta3 in macrophage lineage cells (b3KOM)
transcription profiling by array
Mus musculus
10
11/12/2015
9
-
Expression data from Arabidopsis thaliana senescent leaves treated with cytokinins
transcription profiling by array
Arabidopsis thaliana
9
11/12/2015
16
-
Comparative Genomic Hybridization (CGH) reveals sex chromosome location and gene movement in stalk-eyed flies (family Diopsidae)
comparative genomic hybridization by array
Sphyracephala beccarii, Teleopsis quinqueguttata
6
11/12/2015
15
-
Comparative Genomic Hybridization (CGH) reveals sex chromosome location and gene movement in stalk-eyed flies (family Diopsidae), Sphyracephala beccarii
comparative genomic hybridization by array
Sphyracephala beccarii
3
11/12/2015
15
-
Comparative Genomic Hybridization (CGH) reveals sex chromosome location and gene movement in stalk-eyed flies (family Diopsidae), Teleopsis quinqueguttata
comparative genomic hybridization by array
Teleopsis quinqueguttata
3
11/12/2015
15
-
Exercise-induced mitochondrial translocation of p53 repairs mitochondrial DNA mutations
transcription profiling by array
Mus musculus
83
11/12/2015
50
-
Microarray analysis of high-dose recombinant erythropoietin treatment of unilateral brain injury in neonatal mouse hippocampus
transcription profiling by array
Mus musculus
24
11/12/2015
15
-
Assessment of functional overlap between mouse Dux and human DUX4 in vitro and in vivo
ChIP-seq
Homo sapiens
4
11/12/2015
ENA
17
-
Functional characterization of hGRβ Isoform in mouse liver
transcription profiling by array
Mus musculus
9
11/12/2015
9
-
GRα-independent transcriptional activity of hGRβ in GR Liver Knockout Mouse
transcription profiling by array
Mus musculus
12
11/12/2015
16
-
Characterization of Glucocorticoid Receptor (GR) in Mouse Liver
transcription profiling by array
Mus musculus
16
11/12/2015
10
-
Aedes aegypti Cry11Aa intoxication curve transcriptome
RNA-seq of coding RNA
Aedes aegypti
26
11/12/2015
-
23
-
A dynamic unfolded protein response contributes to the control of cortical neurogenesis
other, RNA-seq of coding RNA
Mus musculus
8
11/12/2015
-
ENA
27
-
Downregulation of LATS kinases alters p53 to promote cell migration
RNA-seq of coding RNA
Homo sapiens
8
11/12/2015
ENA
52
-
LEM-2 ChIP-seq to study chromatin anchoring
ChIP-seq
Caenorhabditis elegans
12
11/12/2015
-
ENA
15
-
RNA-seq for monitoring expression changes in absence of chromatin anchoring
RNA-seq of coding RNA
Caenorhabditis elegans
6
11/12/2015
-
ENA
16
-
RNA-Seq of human astrocytes
RNA-seq of coding RNA
Homo sapiens, Mus musculus
45
11/12/2015
-
ENA
168
-
Genome wide identification of enhancer regions in the retrosplenial cortex of the prairie vole, Microtus ochrogaster
ChIP-seq
Microtus ochrogaster
2
11/12/2015
-
ENA
16
-
Comparison of the DNA methylation profiles of CD14+ monocytes from human peripheral blood with DCs and MACs obtained by exposure with GM-CSF/IL-4 and GM-CSF, respectively, and with mature DCs and MACs after LPS exposure
methylation profiling by array
Homo sapiens
15
11/12/2015
-
23
-
mRNA Sequencing of skeletal muscle genes in wildtype and BCATm (BCAT2) KO mice
RNA-seq of coding RNA
Mus musculus
8
11/12/2015
-
ENA
19
-
ECSTASY (MDMA) ALTERS CARDIAC GENE EXPRESSION AND DNA METHYLATION: IMPLICATIONS FOR CIRCADIAN RHYTHM DYSFUNCTION IN THE HEART
transcription profiling by array, methylation profiling by array
Mus musculus
39
11/12/2015
20
-
ECSTASY (MDMA) ALTERS CARDIAC GENE EXPRESSION AND DNA METHYLATION: IMPLICATIONS FOR CIRCADIAN RHYTHM DYSFUNCTION IN THE HEART (methylation)
methylation profiling by array
Mus musculus
19
11/12/2015
-
9
-
ECSTASY (MDMA) ALTERS CARDIAC GENE EXPRESSION AND DNA METHYLATION: IMPLICATIONS FOR CIRCADIAN RHYTHM DYSFUNCTION IN THE HEART (expression)
transcription profiling by array
Mus musculus
20
11/12/2015
15
-
Dual RNA-seq – Comparative RNA-seq (in vitro medium shift experiment)
RNA-seq of coding RNA
Salmonella enterica subsp. enterica serovar Typhimurium
18
11/12/2015
-
ENA
18
-
Dual RNA-seq – sRNA profiling in various cell types
RNA-seq of coding RNA
Homo sapiens, Mus musculus, Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344, Sus scrofa, mixed sample: human cell line AGS and Salmonella Typhimurium SL1344, mixed sample: human cell line CaCo-2 and Salmonella Typhimurium SL1344, mixed sample: human cell line HEK 293 and Salmonella Typhimurium SL1344, mixed sample: human cell line HT29 and Salmonella Typhimurium SL1344, mixed sample: human cell line LoVo and Salmonella Typhimurium SL1344, mixed sample: human cell line THP-1 (-PMA)and Salmonella Typhimurium SL1344, mixed sample: mouse cell line BMDM and Salmonella Typhimurium SL1344, mixed sample: mouse cell line L929 and Salmonella Typhimurium SL1344, mixed sample: mouse cell line MEF and Salmonella Typhimurium SL1344, mixed sample: mouse cell line RAW264.7 and Salmonella Typhimurium SL1344, mixed sample: pig cell line 3D4/31 and Salmonella Typhimurium SL1344, mixed sample: pig cell line IPEC-J2 and Salmonella Typhimurium SL1344
89
11/12/2015
-
ENA
40
-
Gene expression profiling of the palate in Erk2 mutant mouse models
transcription profiling by array
Mus musculus
16
11/12/2015
15
-
Genome-wide analysis reveals NRP1 as a critical HIF1-E2F7 target gene in the regulation of motorneuron guidance in vivo
ChIP-seq
Homo sapiens
3
11/12/2015
ENA
14
-
RNA sequencing of a C57BL/6J-DBA/2J (B6.D2) congenic mouse and C57BL/6J (B6) wild-type littermates reveals cis and trans differences in gene expression
RNA-seq of coding RNA
Mus musculus
32
11/12/2015
ENA
17
-
Genome-wide analysis of MCF-7 cells expressing or not MMP-14 (MT1-MMP) growing in monolayer cell culture conditions
transcription profiling by array
Homo sapiens
2
11/12/2015
21
-
RNA Polymerase II-associated factor 1 regulates the release and phosphorylation of paused RNA Polymerase II
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
32
11/12/2015
ENA
36
-
Identification and successful negotiation of a metabolic checkpoint in direct neuronal reprogramming
transcription profiling by array
Mus musculus
8
11/12/2015
15
-
Super-Enhancer-mediated Control of Liver Fibrosis by BET Bromodomain Proteins
ChIP-seq
Homo sapiens
12
11/12/2015
ENA
20
-
Chromatin immunoprecipitation-sequencing of HEK293 cells (HEK293-HPT-blue) and HEK293 cells stably over-expressing the BAHD1 gene (HEK293-HPT-BAHD1)
ChIP-seq
Homo sapiens
7
11/12/2015
ENA
11
-
Transcriptome of HEK293 cells stably knockdown for the BAHD1 gene with a shRNA
transcription profiling by array
Homo sapiens
6
11/12/2015
20
HEK293 cells (HEK293-CT) and HEK293 cells stably over-expressing the BAHD1 gene (HEK-BAHD1)
ChIP-seq, transcription profiling by array, methylation profiling by high throughput sequencing
Homo sapiens
30
11/12/2015
19
-
whole-genome bisulfite sequencing (BS-seq) of HEK293 cells (HEK293-CT) and HEK293 cells stably over-expressing the BAHD1 gene (HEK-BAHD1)
methylation profiling by high throughput sequencing
Homo sapiens
3
11/12/2015
ENA
19
-
Methylated DNA immunoprecipitation-sequencing of HEK293 cells (HEK293-CT) and HEK293 cells stably over-expressing the BAHD1 gene (HEK-BAHD1)
methylation profiling by high throughput sequencing
Homo sapiens
8
11/12/2015
ENA
16
-
Transcriptome of HEK293 cells (HEK293-CT) and HEK293 cells stably over-expressing the BAHD1 gene (HEK-BAHD1)
transcription profiling by array
Homo sapiens
6
11/12/2015
18
Expression data from primary isolated colonic epithelial cells from ChopIEC Tg/Tg mice and Chopflox/flox mice as wild-type controls
transcription profiling by array
Mus musculus
16
11/12/2015
15
-
Differential analyses for RNA-seq: transcript-level estimates improve gene-level inferences
RNA-seq of coding RNA
synthetic construct
6
10/12/2015
52
-
Gonadal transcriptome analysis in sterile double haploid Japanese flounder
RNA-seq of coding RNA
Paralichthys olivaceus
6
10/12/2015
-
ENA
16
-
Transient activation of the WNT pathway after disruption/remodeling of colorectal cancer cell clusters promotes a malignant phenotype
transcription profiling by array
Homo sapiens
4
10/12/2015
52
-
Profile of mouse Lewis lung carcinoma LLC1 cell line cultivated in 2-dimensional or 3-dimensional cell culture enriched with laminin rich extracellular matrix proteins
transcription profiling by array
Mus musculus
9
10/12/2015
27
-
Gene expression profile of mouse Lewis lung carcinoma cell line cultivated in 2-dimensional or 3-dimensional cell culture enriched with laminin rich extracellular matrix proteins
transcription profiling by array
Mus musculus
3
10/12/2015
26
-
miRNA expression profile of mouse Lewis lung carcinoma LLC1 cell line cultivated in 2-dimensional or 3-dimensional cell culture enriched with laminin rich extracellular matrix proteins
transcription profiling by array
Mus musculus
6
10/12/2015
21
-
Gene expression profile comparison of DC subsets
transcription profiling by array
Mus musculus
3
10/12/2015
26
-
Analysis of mature miRNA levels in the context of CHO cell proliferation
transcription profiling by array
Cricetulus griseus
46
10/12/2015
17
-
The immunomodulatory effects of IL-4 on monocyte-derived macrophages
transcription profiling by array
Homo sapiens
4
10/12/2015
18
-
transcription profiling by array of Arabidopsis pam48 (mterf6-1) mutants
transcription profiling by array
Arabidopsis thaliana
6
10/12/2015
40
GBM miR338-p5
transcription profiling by array
Homo sapiens
6
10/12/2015
35
-
Effects of High Hydrostatic Pressure on Expression Profiles of In Vitro Produced Vitrified Bovine Blastocysts
transcription profiling by array
Bos taurus
12
10/12/2015
24
-
Comparison of mouse macrophages and reproductive tract epithelial cells at baseline and in an inflammatory milieu mimicking a Chlamydia genital tract infection
transcription profiling by array
Mus musculus
24
10/12/2015
25
-
Limiting cholesterol biosynthetic flux engages type I IFN signaling in a STING-dependent manner
RNA-seq of coding RNA
Homo sapiens
6
10/12/2015
-
ENA
24
-
DGCR8 acts as a novel adaptor for the exosome complex to degrade double-stranded structured RNAs
RNA-seq of coding RNA
Homo sapiens
11
10/12/2015
ENA
20
-
The histone chaperone CAF-1 safeguards somatic cell identity during transcription factor-induced reprogramming (sequencing)
ChIP-seq, RNA-seq of coding RNA
Mus musculus
61
10/12/2015
-
32
-
CAF-1 safeguards somatic cell identity during factor-induced reprogramming
transcription profiling by array
Mus musculus
12
10/12/2015
17
-
Gene expression profiling of neurons with Rbfox1 and Rbfox3 knockdown
transcription profiling by array
Mus musculus
6
10/12/2015
28
-
Cytoplasmic Rbfox1 regulates the neuronal expression of synaptic and autism-related genes
RNA-seq of coding RNA
Mus musculus
16
10/12/2015
56
-
Identification of Rbfox1 binding in the cytoplasm of neurons by iCLIP
RNA-seq of coding RNA
Mus musculus
2
10/12/2015
-
43
-
Phosphorylation of an HP1-like protein regulates RNA-bridged heterochromatin body assembly for DNA elimination
ChIP-seq, other
Tetrahymena thermophila
22
10/12/2015
-
22
-
DNA elimination analysis of Tetrahymena cells defective in heterochromatin body formation
other
Tetrahymena thermophila
8
10/12/2015
-
20
-
Chromatin immunoprecipitation sequencing of heterochromatin-associated proteins in Tetrahymena
ChIP-seq
Tetrahymena thermophila
14
10/12/2015
-
20
-
Epigenetic (re)programming of caste-specific behavior in the ant Camponotus floridanus
ChIP-seq, RNA-seq of coding RNA
Camponotus floridanus
64
10/12/2015
ENA
17
-
Analyzing synergistic and non-synergistic interactions in signalling pathways using Boolean Nested Effect Models
transcription profiling by array
Homo sapiens
84
10/12/2015
30
-
Non-classical CD4+CD49b+ regulatory T cells as a better alternative to conventional CD4+CD25+ T cells to dampen arthritis severity
transcription profiling by array
Mus musculus
10
10/12/2015
56
-
Systems analysis of uterine microenvironment 4, 6, 8, 10, 11 or 12 days after fertilization
transcription profiling by array
Mus musculus
33
10/12/2015
-
31
-
Systems analysis of uterine microenvironment in Treg depleted pregnant mice at 12 days after fertilization
transcription profiling by array
Mus musculus
14
10/12/2015
-
28
-
Role of macrophages in colitis
transcription profiling by array
Mus musculus
2
10/12/2015
24
-
Casein kinase II promotes target silencing by miRISC through direct phosphorylation of the DEAD-box RNA helicase CGH-1
RNA-seq of non coding RNA
Caenorhabditis elegans
4
10/12/2015
-
ENA
20
-
The histone chaperone CAF-1 safeguards somatic cell identity during transcription factor-induced reprogramming
ChIP-seq, transcription profiling by array, RNA-seq of coding RNA
Mus musculus
73
10/12/2015
-
38
-
Identification of Copy Number Variants in Patients with Hypoplastic Left Heart Syndrome and Other Congenital Heart Defects
comparative genomic hybridization by array
Homo sapiens
70
10/12/2015
-
28
-
The contribution of Alu exons to the human proteome
RNA-seq of coding RNA
Homo sapiens
9
10/12/2015
-
ENA
18
-
Transcriptomics of circulating human eosinophils
transcription profiling by array
Homo sapiens
17
10/12/2015
29
-
Molecular characterization of chronic antibody mediated rejection in kidney transplantation (mRNA CD4)
transcription profiling by array
Homo sapiens
10
10/12/2015
35
-
Somatosensory Neuron Types Identified by High-Coverage Single-Cell RNA-Sequencing and Functional Heterogeneity
RNA-seq of coding RNA
Mus musculus
209
10/12/2015
-
ENA
36
-
ACLY and ACC1 Regulate Hypoxia-Induced Apoptosis by Modulating ETV4 via α-ketoglutarate
transcription profiling by array
Homo sapiens
22
10/12/2015
23
-
A genome-wide search for epigenetically regulated genes in zebra finch using MethylCap-seq and RNA-seq
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Taeniopygia guttata
10
10/12/2015
-
23
-
Paclitaxel resistance in ovarian cancer increases oncolytic adenovirus efficacy via upregulated CAR expression and dysfunctional cell cycle control
transcription profiling by array
Homo sapiens
4
10/12/2015
54
-
Identification of a genomic signature in BRCA1-mutated triple negative breast cancer by Comparative Genomic Hybridization
comparative genomic hybridization by array
Homo sapiens
131
10/12/2015
43
-
Molecular characterization of chronic antibody mediated rejection in kidney transplantation (microRNA)
transcription profiling by array
Homo sapiens
9
10/12/2015
23
-
Molecular characterization of chronic antibody mediated rejection in kidney transplantation (mRNA)
transcription profiling by array
Homo sapiens
18
10/12/2015
25
-
MicroRNA expression profiles for paediatric brain tumours
transcription profiling by array
Homo sapiens
64
10/12/2015
-
48
-
Dfifferential gene expression in human KBM-7 clone B and KBM-7-NuKO (NUDT2 KO) cells
RNA-seq of coding RNA
human
6
09/12/2015
-
ENA
36
-
Transcriptome profiling of quiescent and cytokine induced normal human haematopoietic CD34+ HSPCs, and AML blast cells
transcription profiling by array
Homo sapiens
12
09/12/2015
-
136
-
Transcription profiling by array of human neural crest-originated stem cells, BLM melanoma cell line and neonatal highly pigmented melanocytes to study their production of extracellular factors
transcription profiling by array
Homo sapiens
10
09/12/2015
50
-
Early regulation of profibrotic genes in primary human cardiac myocytes by Trypanosoma cruzi
transcription profiling by array
Homo sapiens
9
09/12/2015
17
-