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AccessionTitleTypeOrganismAssaysReleasedProcessedRawAtlas
Transcriptomic Analysis of Airway Smooth Muscle by Next-Generation Sequencing (RNA-Seq): Asthma versus Healthy Controls
RNA-seq of coding RNA
Homo sapiens
24
15/08/2014
-
-
Comparison of the responses of Mycobacterium tuberculosis and Mycobacterium bovis to nutrient starvation
transcription profiling by array
Mycobacterium bovis, Mycobacterium tuberculosis
42
15/08/2014
-
Elucidating the RamA Regulon in Klebsiella pneumoniae
RNA-seq of coding RNA
Klebsiella pneumoniae
8
15/08/2014
-
ENA
-
Differential Immunomodulatory Impact of Bacillus subtilis Spores and Vegetative Cells on a Human Colonic Epithelial Cell-Line Model
transcription profiling by array
Homo sapiens
2
14/08/2014
-
Expression analysis of stable chronic obstructive pulmonary disease and acute exacerbation of chronic obstructive pulmonary disease
transcription profiling by array
Homo sapiens
5
14/08/2014
-
A relative shift in cloacal location repositions external genitalia in amniote evolution
RNA-seq of coding RNA
Anolis carolinensis, Mus musculus
24
14/08/2014
-
-
-
Multinodality vaccination against clade C SHIV: partial protection against mucosal challenges with a heterologous tier 2 virus
transcription profiling by array
Macaca mulatta
14
14/08/2014
-
Culture-expanded mouse lymph node-derived fibroblastic reticular cells
transcription profiling by array
Mus musculus
2
14/08/2014
-
Discovery of biomarkers predictive of GSI response in triple negative breast cancer and adenoid cystic carcinoma
RNA-seq of coding RNA
Homo sapiens
27
14/08/2014
-
-
-
The exon junction complex controls transposable element activity by ensuring faithful splicing of the piwi transcript
RNA-seq of non coding RNA
Drosophila melanogaster
6
14/08/2014
-
-
-
Dissecting engineered cell types and enhancing cell fate conversion via CellNet
transcription profiling by array
Mus musculus
25
14/08/2014
-
Gene expression profiling of wild type and CNS2-deficient Treg cells in the resting state
RNA-seq of coding RNA
Mus musculus
9
14/08/2014
-
-
-
Genome wide analysis of gene expression in LPS stimulated splenic B cell.
RNA-seq of coding RNA
Mus musculus
4
14/08/2014
-
-
Histone-fold domain protein NF-Y promotes chromatin accessibility for cell type-specific master transcription factors
ChIP-seq, transcription profiling by array
Mus musculus
19
14/08/2014
-
Histone-fold domain protein NF-Y promotes chromatin accessibility for cell type-specific master transcription factors [ChIP-seq]
ChIP-seq
Mus musculus
4
14/08/2014
-
-
Histone-fold domain protein NF-Y promotes chromatin accessibility for cell type-specific master transcription factors [gene expression]
transcription profiling by array
Mus musculus
15
14/08/2014
-
Analysis of the global retinal transcriptome of rod photoreceptor-specific Dicer1 conditional knockout mice and control littermates
RNA-seq of coding RNA, RNA-seq of non coding RNA
Mus musculus
12
14/08/2014
-
-
-
RNAseq analysis of the global retinal transcriptome of rod photoreceptor-specific Dicer1 conditional knockout mice and control littermates
RNA-seq of coding RNA
Mus musculus
6
14/08/2014
-
-
-
small RNAseq analysis of the global retinal transcriptome of rod photoreceptor-specific Dicer1 conditional knockout mice and control littermates
RNA-seq of non coding RNA
Mus musculus
6
14/08/2014
-
-
-
H3K27 modifications define segmental regulatory domains in the Drosophila bithorax complex.
ChIP-seq
Drosophila melanogaster
82
14/08/2014
-
-
Ecdysone and Mediator trigger a metabolic switch uncoupling cell cycle from cell growth to end proliferation in Drosophila neural stem cells
RNA-seq of coding RNA
Drosophila melanogaster
10
14/08/2014
-
-
Expression profiling of long noncoding RNAs and mRNAs in uterine leiomyoma
transcription profiling by array
Homo sapiens
15
14/08/2014
-
-
DNA methylation and gene expression analysis of an Epithelial-to-mesenchymal transition model
transcription profiling by array, methylation profiling by high throughput sequencing
Canis lupus familiaris
8
14/08/2014
-
Madin-Darby canine kidney cells expression array
transcription profiling by array
Canis lupus familiaris
6
14/08/2014
-
Whole genome bisulfite sequencing of MDCK cells, before and after TGFB-induced epithelial-mesenchymal transition
methylation profiling by high throughput sequencing
Canis lupus familiaris
2
14/08/2014
-
-
BP oil spill - lab - liver
transcription profiling by array
Fundulus grandis
71
13/08/2014
-
-
The obese fetal transcriptome
transcription profiling by array
Homo sapiens
16
13/08/2014
-
Expression Profiles of Responders versus Non-Responders with AML or MDS to the Novel Mitochondrial Inhibitor CPI-613
transcription profiling by array
Homo sapiens
8
13/08/2014
-
Expression data from Eµ-Myc B-cell lymphoma
transcription profiling by array
Mus musculus
30
13/08/2014
-
Expression data from the rituximab-resistant lymphoma cell lines and the parental cell lines
transcription profiling by array
Homo sapiens
4
13/08/2014
-
NAD+ and PPAR-modifying drugs in a C. elegans model of respiratory chain complex I deficiency
transcription profiling by array
Caenorhabditis elegans
64
13/08/2014
-
The HER2-encoded miR-4728-3p regulates ESR1 through a non-canonical internal seed interaction
transcription profiling by array
Homo sapiens
20
13/08/2014
-
-
Reinstatement of developmental stage-specific GATA4 enhancers controls the gene expression program in heart disease
ChIP-seq, RNA-seq of coding RNA
Mus musculus
45
13/08/2014
-
-
Anopheles gambiae G3 small RNA sequence: Adult Female Body
RNA-seq of non coding RNA
Anopheles gambiae
8
13/08/2014
-
-
-
Transcriptome evaluation of gene expression changes during carotenoid accumulation in the storage root of carrot (Daucus carota)
transcription profiling by array
Daucus carota
6
13/08/2014
-
Expression profiles of wildtype and SHOX transgenic embryonic mouse limbs
transcription profiling by array
Mus musculus
4
13/08/2014
-
Transcriptome Sequencing (RNA-seq) of Ara-C Resistant Murine AML Cell Lines Identifies Mechanisms of Resistance
RNA-seq of coding RNA
Mus musculus
4
13/08/2014
-
-
Genome-wide analysis of the effects of the novel mithramycin analogue DIG-MSK on human A2780 ovarian carcinoma cells
transcription profiling by array
Homo sapiens
9
13/08/2014
-
Transcriptome analysis along berry development of 'Syrah' x 'Pinot Noir' offsprings extreme for flavonoid content
transcription profiling by array
Vitis vinifera
24
13/08/2014
-
-
Exon-level expression profiling of normal colonic mucosa samples.
transcription profiling by array
Homo sapiens
19
13/08/2014
-
Effects of Myb shRNA on Airway Epithelial Cells
transcription profiling by array
Mus musculus
12
12/08/2014
-
-
Human oocytes reprogram adult somatic cells to pluripotent stem cells [Illumina]
transcription profiling by array
Homo sapiens
5
12/08/2014
-
-
Pervasive effects of an endophytic fungus on host genetic and phenotypic expression in a tropical tree (part 3)
transcription profiling by array
Theobroma cacao
15
12/08/2014
-
Genome-wide analysis of Schwann cell gene expression in LKB1-SCKO mutant mice prior to occurrence of axon degeneration
transcription profiling by array
Mus musculus
4
12/08/2014
-
-
Two Histone/Protein Acetyltransferases, CBP and p300, Are Indispensable for Foxp3+ T-regulatory Cell Development and Function
transcription profiling by array
Mus musculus
9
12/08/2014
-
Response to drought and salt stress in leaves of poplar (Populus alba × P. glandulosa): Expression profiling by oligonucleotide microarray analysis
transcription profiling by array
Populus alba x Populus glandulosa
6
12/08/2014
-
Human Wnt signaling pathway (Realtime qPCR array)
transcription profiling by RT-PCR
Homo sapiens
4
12/08/2014
-
-
Comparison of total and cytoplasmic mRNA reveals global regulation by nuclear retention and miRNAs
RNA-seq of coding RNA
Homo sapiens
24
12/08/2014
-
-
DNA copy number detection from exome sequencing - Exploiting the off-targets
comparative genomic hybridization by array
Homo sapiens, Mus musculus
10
12/08/2014
-
-
DNA copy number detection from exome sequencing - Exploiting the off-targets (Nimblegen)
comparative genomic hybridization by array
Mus musculus
4
12/08/2014
-
-
DNA copy number detection from exome sequencing - Exploiting the off-targets (SNP)
comparative genomic hybridization by array
Homo sapiens
6
12/08/2014
-
-
Accelerated senescence and enhanced disease resistance in hybrid chlorosis lines derived from interspecific crosses between tetraploid wheat and Aegilops tauschii
transcription profiling by array
Triticum aestivum
6
12/08/2014
-
DNA methylation modifications associated with Chronic Fatigue Syndrome
methylation profiling by array
Homo sapiens
24
12/08/2014
-
-
Transcriptional response to stress in serum deprived mouse fibroblasts in the presence of MSK1/2 inhibitor.
RNA-seq of coding RNA
Mus musculus
14
12/08/2014
-
-
Specificity, propagation and memory of pericentric heterochromatin in mouse fibroblasts
ChIP-seq
Mus musculus
14
12/08/2014
-
-
-
The long noncoding RNAs NEAT1 and MALAT1 bind active chromatin sites
other, ChIP-seq
Homo sapiens
66
12/08/2014
-
-
Gene Expression Profiles in Chronic Idiopathic Urticaria
transcription profiling by array
Homo sapiens
18
12/08/2014
-
Global gene expression analysis reveals importance of thermal effect in cellular response to millimeter wave exposure
transcription profiling by array
Homo sapiens
16
12/08/2014
-
Transcriptomes of the Cochlear Inner and Outer Hair Cells
transcription profiling by array
Mus musculus
7
12/08/2014
-
-
Indole-3-Carbinol Preferentially Target ERα-Positive Breast Cancer Cells.
transcription profiling by array
Homo sapiens
36
12/08/2014
-
-
Transcriptional response to stress in serum deprived mouse fibroblasts [RNA-Seq]
RNA-seq of coding RNA
Mus musculus
4
12/08/2014
-
-
Promoter proximal pausing in response to stress in serum deprived mouse fibroblasts.
RNA-seq of non coding RNA
Mus musculus
4
12/08/2014
-
-
Stress-induced signaling to the nucleosome in serum deprived mouse fibroblasts.
ChIP-seq
Mus musculus
22
12/08/2014
-
-
Transcriptional response to stress in serum deprived mouse fibroblasts
transcription profiling by array
Mus musculus
12
12/08/2014
-
Snd1-Mtdh interaction regulates cell survival under camptothecin-induced replication stress
transcription profiling by array
Mus musculus
8
12/08/2014
-
The Hippo tranducer YAP1 transforms activated satellite cells and is a potent effector of embryonal rhabdomyosarcoma formation
ChIP-seq
Homo sapiens, Mus musculus
4
12/08/2014
-
-
-
RNAseq of memory cocktail versus IL-2 grown OT-I CD8 T cells
RNA-seq of coding RNA
Mus musculus
15
12/08/2014
-
-
-
Brown Adipose Tissue (BAT) in Visceral Fat Depot
transcription profiling by array
Homo sapiens
3
12/08/2014
-
MicroRNA signature predict chemotherapy response in patients with advanced colorectal cancer
transcription profiling by RT-PCR
Homo sapiens
39
12/08/2014
-
-
Role of Yes-Associated Protein 1 (YAP1) in rhabdomyosarcoma
transcription profiling by array
Mus musculus
12
12/08/2014
-
Genome-wide DNA methylation aberrations in human atherosclerosis
methylation profiling by high throughput sequencing, methylation profiling by array
Homo sapiens
51
12/08/2014
-
-
Genome-wide DNA methylation aberrations in human atherosclerosis (450K)
methylation profiling by array
Homo sapiens
49
12/08/2014
-
-
Genome-wide DNA methylation aberrations in human atherosclerosis (sequencing)
methylation profiling by high throughput sequencing
Homo sapiens
2
12/08/2014
-
-
-
eIF3a in Urinary Bladder Cancer – in vivo and in vitro insights
transcription profiling by array
Homo sapiens
6
12/08/2014
-
-
Transcription profiling by array of primary prostate cancer biopsies wutg different ETS transcription factor rearrangements
transcription profiling by array
Homo sapiens
50
12/08/2014
-
Misprocessing of APP and accumulation of β-Amyloid causes early alteration of pathways implicated in late-onset Alzheimer disease.
transcription profiling by array
Mus musculus
24
12/08/2014
-
Whole blood mRNA expression profiling of host molecular networks in neonatal sepsis
transcription profiling by array
Homo sapiens
170
12/08/2014
-
NRSF mediated epigenetic mechanisms of ion channel dysfunction in experimental temporal lobe epilepsy
transcription profiling by array
Rattus norvegicus
22
12/08/2014
-
-
NRSF mediated epigenetic mechanisms of ion channel dysfunction in experimental temporal lobe epilepsy [Kainate, NRSE ODNs vs. Kainate, scrambled ODNs]
transcription profiling by array
Rattus norvegicus
7
12/08/2014
-
-
NRSF mediated epigenetic mechanisms of ion channel dysfunction in experimental temporal lobe epilepsy [Control vs. Kainate, scrambled ODNs]
transcription profiling by array
Rattus norvegicus
7
12/08/2014
-
-
NRSF mediated epigenetic mechanisms of ion channel dysfunction in experimental temporal lobe epilepsy [Control vs. Kainate, NRSE ODNs]
transcription profiling by array
Rattus norvegicus
8
12/08/2014
-
-
Tel AML1 mtumours
RNA-seq of coding RNA
Mus musculus
140
12/08/2014
-
ENA
-
Transcription profiling by array of gill transcriptome changes in Gulf killifish (Fundulus grandis) that coincide with controlled laboratory-based exposure to various concentrations of experimentally-weathered south Louisiana crude oil
transcription profiling by array
Fundulus grandis
59
11/08/2014
-
-
Combinatorial cis-regulation in Saccharomyces species
ChIP-seq
Saccharomyces cerevisiae
50
11/08/2014
-
-
Predicting Response and Survival in Chemotherapy-Treated Triple-Negative Breast Cancer
other
Homo sapiens
69
11/08/2014
-
Whole genome expression analysis of a skin biopsy from two individuals with ectodermal dysplasia features associated with hearing loss in GRHL2
transcription profiling by array
Homo sapiens
6
11/08/2014
-
-
A systems biology approach reveals a link between systemic cytokines and skeletal muscle energy metabolism in a rodent smoking model and human COPD
transcription profiling by array, RNA-seq of coding RNA
Cavia porcellus
49
11/08/2014
-
Development of an RNAseq-based oligonucleotide microarray to study global gene expression profile in the guinea pig animal model
RNA-seq of coding RNA
Cavia porcellus
4
11/08/2014
-
-
-
Genome-wide analysis of stress response in mouse fibroblasts
ChIP-seq, transcription profiling by array, RNA-seq of coding RNA, RNA-seq of non coding RNA
Mus musculus
56
11/08/2014
-
Molecular changes in lobular breast cancers in response to endocrine therapy
transcription profiling by array
Homo sapiens
36
11/08/2014
-
-
Partial phenotypic rescue of the Sesb1 mitochondrial ANT1 disease model in Drosophila
transcription profiling by array
Drosophila melanogaster
14
11/08/2014
-
Global gene expression profiling of guinea pig whole-lung and hindlimb muscles following long-term exposure to cigarette smoke and/or hypoxia
transcription profiling by array
Cavia porcellus
45
11/08/2014
-
CTCF/CP190 and ISWI dependent regulation of nucleosome occupancy
ChIP-seq
Drosophila melanogaster
6
11/08/2014
-
-
CTCF/CP190 and ISWI dependent regulation of nucleosome occupancy [MNase-seq]
ChIP-seq
Drosophila melanogaster
3
11/08/2014
-
-
CTCF/CP190 and ISWI dependent regulation of nucleosome occupancy [ChIP-seq]
ChIP-seq
Drosophila melanogaster
3
11/08/2014
-
-
Gene expression of the colonic epithelial cells in CRB mice fed with HFD and LFD
transcription profiling by array
Mus musculus
4
11/08/2014
-
Transcription profiling by array of colonic epithelial cells from mice starved, subsequently refed with or without antibiotics metronidazol and vancomycin
transcription profiling by array
Mus musculus
6
11/08/2014
Gene expression profile after injection of rhabdoviral recombinant protein NV
transcription profiling by array
Oncorhynchus mykiss
16
11/08/2014
-
Nanog-induced intestinal and colonic hyperplasia
transcription profiling by array
Mus musculus
8
11/08/2014
-
-
Expression data from RLT-PSC, human pancreatic stellate cell lineage
transcription profiling by array
Homo sapiens
16
10/08/2014
-
Gene expression profiles in the bovine corpus luteum (CL) of the estrous cycle and pregnancy: Possible roles of chemokines in regulating CL function during pregnancy
transcription profiling by array
Bos taurus
16
10/08/2014
-
RNA-seq data: Baf60c homozygous deletion vs. WT at two time points in cardiac differentiation
RNA-seq of coding RNA
Mus musculus
12
10/08/2014
-
-
-
A strand-specific switch in noncoding transcription switches the function of a Polycomb/Trithorax response element
ChIP-seq
Drosophila melanogaster
6
10/08/2014
-
-
Stimulation of RA SFBs with IL1 or PDGF-D
transcription profiling by array
Homo sapiens
60
10/08/2014
-
Host cell gene expression in Influenza A/duck/Malaysia/F59/04/1998 (H5N2) infected MDCK cells at 10 hour post infection
transcription profiling by array
Canis lupus familiaris
6
10/08/2014
-
Host cell gene expression in Influenza A/duck/Malaysia/F59/04/1998 (H5N2) infected CEF cells at 10 hour post infection
transcription profiling by array
Gallus gallus
6
10/08/2014
-
Host cell gene expression in Influenza A/duck/Malaysia/F59/04/1998 (H5N2) infected A549 cells at 10 hour post infection
transcription profiling by array
Homo sapiens
6
10/08/2014
-
Arabidopsis AtbHLH112 protein positively regulates tolerance to abiotic stress and binds to the E-box and a novel motif GCG-box
transcription profiling by array
Arabidopsis thaliana
18
09/08/2014
-
Calcineurin-dependent transcriptome in ICN1 (activated NOTCH1)-induced T cell acute lymphoblastic leukemia (T-ALL)
transcription profiling by array
Mus musculus
10
09/08/2014
-
Murine Liver Cells: Control B6 males vs. little (GH-deficient) and Tfm (AR-null) males
transcription profiling by array
Mus musculus
21
09/08/2014
-
A. baumannii Cells: oleanolic acid (OA) tretment vs. ethanol treatment (OA solvent)
transcription profiling by array
Acinetobacter baumannii ATCC 17978
1
09/08/2014
-
The Nuclear Exosome is Active and Important during Budding Yeast Meiosis
RNA-seq of coding RNA
Saccharomyces cerevisiae
2
09/08/2014
-
-
-
Effects of dPRP (PRL8a2) on gene expression of decidual-placental-embryonic tissue
transcription profiling by array
Mus musculus
6
09/08/2014
-
Comparative Analysis of Transcriptional Responses in Monocytes from Human Neonates, Adults, and Older Adults
RNA-seq of coding RNA
Homo sapiens
54
09/08/2014
-
-
Foxo3 Regulated Genes in G1E-ER-GATA-1 Cells
transcription profiling by array
Mus musculus
6
09/08/2014
-
Exosc8-Regulated Genes in Fetal Liver-Derived Erythroid Progenitor Cells
transcription profiling by array
Mus musculus
6
09/08/2014
-
Expression data from Synovial Sarcomas
transcription profiling by array
Homo sapiens
92
09/08/2014
-
Expression data from 58 Synovial Sarcomas
transcription profiling by array
Homo sapiens
58
09/08/2014
-
Expression data from 34 Synovial Sarcomas
transcription profiling by array
Homo sapiens
34
09/08/2014
-
Genetic Copy Number Variants in Myocardial Infarction Patients with Hyperlipidemia
genotyping by array, comparative genomic hybridization by array
Homo sapiens
40
09/08/2014
-
Glucocorticoid receptor profiling in U2OS cells expressing GRalpha or GRgamma isoform
ChIP-seq
Homo sapiens
3
08/08/2014
-
ENA
-
RNA-seq mouse development
RNA-seq of coding RNA, RNA-seq of non coding RNA
Mus musculus
24
08/08/2014
ENA
-
Pol III ChIP-seq mouse development
ChIP-seq
Mus musculus
41
08/08/2014
-
ENA
-
Changes in cellular microRNA expression induced by porcine circovirus type 2-encoded proteins.
RNA-seq of non coding RNA
Sus scrofa
4
08/08/2014
-
-
Inhalation exposure of hexanal in rats
transcription profiling by array
Rattus norvegicus
48
08/08/2014
-
Inhalation exposure of hexanal in rats (miRNA)
transcription profiling by array
Rattus norvegicus
24
08/08/2014
-
The Mpn1 exonuclease defines a novel spliceosomal snRNA decay pathway dependent on Rrp6 and Lsm2-8 complex
RNA-seq of coding RNA
Homo sapiens, Schizosaccharomyces pombe
25
08/08/2014
-
-
Global 3' RACE in yeast and humans
RNA-seq of coding RNA
Homo sapiens, Schizosaccharomyces pombe
4
08/08/2014
-
-
human 3' RACE
RNA-seq of coding RNA
Homo sapiens
6
08/08/2014
-
-
yeast U6 3' RACE
RNA-seq of coding RNA
Schizosaccharomyces pombe
15
08/08/2014
-
-
STAT3-mediated CD133 upregulation promotes hepatocellular carcinoma
transcription profiling by array
Homo sapiens
2
08/08/2014
-
-
Genetic Neuropathology of Obsessive Psychiatric Syndromes
transcription profiling by array
Homo sapiens
133
08/08/2014
-
-
Genome-wide DNA methylation profiles in progression to in situ and invasive carcinoma of the breast with impact on gene transcription and prognosis
methylation profiling by array
Homo sapiens
285
08/08/2014
-
UCSD GBM Data Set
transcription profiling by array
Homo sapiens
23
08/08/2014
-
Threonine-4 of the budding yeast RNAP II CTD couples transcription with Htz1-mediated chromatin remodeling
RNA-seq of coding RNA
Saccharomyces cerevisiae
4
08/08/2014
-
-
-
Role of Ror2 in primordial germ cell migration
transcription profiling by array
Mus musculus
8
08/08/2014
-
SRp20 regulates Genome-wide Alternative RNA splicing events in MEF3T3 cells
transcription profiling by array
Mus musculus
6
08/08/2014
-
Chromatin state dynamics during blood formation
ChIP-seq, RNA-seq of coding RNA
Mus musculus
90
08/08/2014
-
-
Chromatin state dynamics during blood formation (RNA-Seq)
RNA-seq of coding RNA
Mus musculus
16
08/08/2014
-
-
-
Gene expression study of Pestalotiopsis fici on rice medium
RNA-seq of coding RNA
Pestalotiopsis fici W106-1
1
08/08/2014
-
-
Chromatin state dynamics during blood formation (ATAC-seq)
ChIP-seq
Mus musculus
10
08/08/2014
-
-
TaqMan microRNA array for microvesicles released from adipose derived stem cells
other
Homo sapiens
2
08/08/2014
-
-
Chromatin state dynamics during blood formation (ChIP-Seq)
ChIP-seq
Mus musculus
64
08/08/2014
-
-
RNA-seq of 8hr LPS-stimulated bone marrow-derived macrophages from wild type, Ch25h-deficient, and LXRab knockout mice
RNA-seq of coding RNA
Mus musculus
6
08/08/2014
-
-
-
Gene expression in Bone marrow derived macrophages (BMDM) in the presence or absence of Necrotic cells.
transcription profiling by array
Mus musculus
2
08/08/2014
-
A system for genome-wide histone variant dynamics in ES cells reveals dynamic MacroH2A2 replacement at promoters
ChIP-seq
Mus musculus
11
08/08/2014
-
-
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequence Quality Control consortium
transcription profiling by RT-PCR, transcription profiling by array
Homo sapiens
60
08/08/2014
-
-
SEQC Toxicogenomics Study: RNA-Seq data set
RNA-seq of coding RNA
Rattus norvegicus
116
08/08/2014
-
-
-
Genome-Wide Profiling of miRNA-mRNA regulatory network in Skeletal Muscle with Aging
RNA-seq of coding RNA, RNA-seq of non coding RNA
Mus musculus
22
08/08/2014
-
-
-
Genome-Wide Profiling of miRNA-mRNA regulatory network in Skeletal Muscle with Aging [miRNA]
RNA-seq of non coding RNA
Mus musculus
12
08/08/2014
-
-
-
Genome-Wide Profiling of miRNA-mRNA regulatory network in Skeletal Muscle with Aging [mRNA]
RNA-seq of coding RNA
Mus musculus
10
08/08/2014
-
-
-
Comparison of gene expression in wild-type Drosophila testes with tbrd-1 mutant testes
transcription profiling by array
Drosophila melanogaster
10
08/08/2014
-
SEQC Toxicogenomics Study: microarray data set
transcription profiling by array
Rattus norvegicus
105
08/08/2014
-
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequence Quality Control consortium
RNA-seq of coding RNA
Homo sapiens, synthetic construct
2898
08/08/2014
-
-
-
Real-time quantitative PCR analysis of mRNA from the colon of WT, Nod2-/-, Pglyrp3-/-, and Pglyrp3-/-Nod2-/- mice treated with oral DSS
transcription profiling by RT-PCR
Mus musculus
48
08/08/2014
-
-
Transcriptomics-based characterization of smoking and cessation effects in mouse lung
transcription profiling by array
Mus musculus
53
08/08/2014
-
Klebsiella colistin resistance with RNAseq
RNA-seq of coding RNA
Klebsiella pneumoniae
64
08/08/2014
-
ENA
-
Genome-wide methylation analysis of tubulocystic and papillary renal cell carcinomas
methylation profiling by array
Homo sapiens
24
07/08/2014
-
-
Gene expression profiles of human Ad5- and CMV-specific CD4 T cells
transcription profiling by array
Homo sapiens
6
07/08/2014
-
MicroRNAs are required for the feature maintenance and differentiation of brown adipocytes
RNA-seq of coding RNA
Mus musculus
8
07/08/2014
-
-
-
Expression data from primary human hepatic stellate cells treated with coated and uncoated ZnO nanoparticles, or ZnSO4
transcription profiling by array
Homo sapiens
12
07/08/2014
-
Toxicology study on KhES-3 cells.
transcription profiling by array
Homo sapiens
12
07/08/2014
-
-
Concordance between ex vivo PBMC and in vivo human infections confirmed by N-of-1-pathways analysis of single-subject transcriptome
transcription profiling by array
Homo sapiens
8
07/08/2014
-
Gene-expression profiles of BMP signaling-affected SK-OV-3 cells
transcription profiling by array
Homo sapiens
12
07/08/2014
-
Expression profile of Arabidopsis thaliana seedlings subjected to hypoxia
transcription profiling by array
Arabidopsis thaliana
5
07/08/2014
-
Translational profiling through biotinylation of tagged ribosomes in zebrafish
transcription profiling by array
Danio rerio
4
07/08/2014
-
Effect of fbw7 deletion in mouse pancreatic ducts
transcription profiling by array
Mus musculus
3
07/08/2014
-
The transcription factor FOXM1 coordinates the expression of cell cycle-related genes and plays a pivotal role in tumorigenesis and cancer progression
transcription profiling by array
Homo sapiens
7
07/08/2014
-
Effect of 10 or 25 days cortisol treatment on late gestation fetal septum
transcription profiling by array
Ovis aries
27
07/08/2014
-
Bacteroides fragilis in vivo gene expression
transcription profiling by array
Bacteroides fragilis 638R
11
07/08/2014
-
Effect of 48 h aldosterone treatment on late-gestation fetal lung
transcription profiling by array
Ovis aries
8
07/08/2014
-
Gene expression profiling of mouse prostate over-expressing the Notch1 intracellular domain.
transcription profiling by array
Mus musculus
7
07/08/2014
-
High resolution ChIP sequencing reveals novel bindings targets and prognostic role for SOX11 in Mantle cell lymphoma (RNA-Seq)
RNA-seq of coding RNA
Homo sapiens
6
07/08/2014
-
-
-
Telomeric ORFs (TLOs) in Candida spp. encode Mediator subunits that regulate distinct virulence traits
ChIP-chip by tiling array
Candida dubliniensis
3
06/08/2014
-
Gene expressions in pancreatic cancer cells
transcription profiling by array
Homo sapiens
3
06/08/2014
-
Perturbation of the Notch pathway in Xenopus laevis embryos
transcription profiling by array
Xenopus laevis
27
06/08/2014
-
Next Generation Sequencing Facilitates Quantitative Analysis of Normal Human Kidney Transcriptomes
RNA-seq of coding RNA
Homo sapiens
2
06/08/2014
-
-
Inhalation exposure of hexanal in rats (mRNA)
transcription profiling by array
Rattus norvegicus
24
06/08/2014
-
Genetic lineage analysis in intramucosal gland-forming gastric neoplasms
comparative genomic hybridization by array
Homo sapiens
59
06/08/2014
-
Regulation of Activation-Associated MicroRNA Accumulation Rates during Monocyte-to-Macrophage Differentiation
transcription profiling by RT-PCR
Homo sapiens
9
06/08/2014
-
-
Effects of DKK1 on global gene expression in female and male bovine embryos at the morula stage
transcription profiling by array
Bos taurus
20
06/08/2014
-
Genome-wide analysis of monocyte derived macrophages from Crohn's Disease patients and controls
transcription profiling by array
Homo sapiens
100
06/08/2014
-
-
Homo sapiens foetal mesenchymal stem cell miRNA transcriptome
RNA-seq of non coding RNA
Homo sapiens
1
06/08/2014
-
-
Cell Fusion Enhances Mesendodermal Differentiation of Human Induced Pluripotent Stem Cells.
transcription profiling by array
Homo sapiens
11
06/08/2014
-
Expression Profiling on Human Cell Lines with Different Acetylation Levels
transcription profiling by array
Homo sapiens
18
06/08/2014
-
Genome-wide mapping of REST-bound sites in human CD4+ T cells
ChIP-seq
Homo sapiens
2
06/08/2014
-
-
Tfap2a dependnt cha
transcription profiling by array
Mus musculus
12
05/08/2014
-
Expression data from PTEN-deficient regulatory T cells
transcription profiling by array
Mus musculus
10
05/08/2014
-
Acute (2 hr) response to rxLeptin injection in preoptic area/hypothalamus/pituitary of juvenile Xenopus laevis
transcription profiling by array
Xenopus laevis
6
05/08/2014
-
miRNA expression profile in CCR6+ regulatory T cells
transcription profiling by array
Mus musculus
2
05/08/2014
-
-
UBL5 is essential for pre-mRNA splicing and sister chromatid cohesion in human cells
RNA-seq of coding RNA
Homo sapiens
10
05/08/2014
-
-
-
SIRT6 and SIRT1 contribute to circadian gene expression
transcription profiling by array
Mus musculus
72
05/08/2014
-
RNA-sequencing analysis of glucose and acetate regulated transcripts in glioblastoma cells
RNA-seq of coding RNA
Homo sapiens
12
05/08/2014
-
-
Kidney toxicity in miR-155-/- mice
transcription profiling by array
Mus musculus
32
05/08/2014
-
Sox9 duplications cause Sry-negative XX sex-reversal in dogs
comparative genomic hybridization by array
Canis lupus familiaris
7
05/08/2014
-
Proliferation conditions promote intrinsic changes in NK Cells for an IL-10 response
ChIP-seq
Mus musculus
9
05/08/2014
-
-
RUNX1 positively regulates a cell adhesion and migration program in murine hemogenic endothelium prior to blood emergence
ChIP-seq, RNA-seq of coding RNA
Mus musculus
20
05/08/2014
-
-
-
RUNX1 positively regulates a cell adhesion and migration program in murine hemogenic endothelium prior to blood emergence (RNA-seq)
RNA-seq of coding RNA
Mus musculus
8
05/08/2014
-
-
-
RUNX1 positively regulates a cell adhesion and migration program in murine hemogenic endothelium prior to blood emergence (DamID-seq)
ChIP-seq
Mus musculus
12
05/08/2014
-
-
-
Expression data from 786-O renal cell cancer cells treated with pentamidine
transcription profiling by array
Homo sapiens
8
05/08/2014
-
Comparative gene array analysis of progenitor cells from deep neck and subcutaneous adipose tissue
transcription profiling by array
Homo sapiens
12
05/08/2014
-
Novel Immunotherapy-Induced Tertiary Lymphoid Aggregates Accumulate as Intratumoral Nodal Structures of Immune Regulation in Pancreatic Cancer
transcription profiling by array
Homo sapiens
20
05/08/2014
-
Gene Profiling in Mouse Fetal Ductus Arteriosus
transcription profiling by array
Mus musculus
8
05/08/2014
-
A long noncoding RNA protects the heart from pathological hypertrophy
RNA-seq of coding RNA
Homo sapiens
2
05/08/2014
-
-
Development of gene expression signatures for Mmp19 regulation of fibroblast phenotype in mouse lungs
transcription profiling by array
Mus musculus
6
05/08/2014
-
Receptor-independent ectopic activity of PROLACTIN predicts aggressive lung tumors and indicates HDACi-based therapeutic strategies.
transcription profiling by array
Homo sapiens
20
05/08/2014
-
-
Effect of short term diet restriction on gene expression in the bovine hypothalamus using next generation RNA sequencing technology
RNA-seq of coding RNA
Bos taurus
21
05/08/2014
-
-
Structural Variant of a Tandem Repeat-containing Silencer Locus Reveals Distinct Pol II and Pol IV-dependent Pathways of siRNA Biogenesis
RNA-seq of non coding RNA
Arabidopsis thaliana
6
05/08/2014
-
-
Transcriptional Profiling of Arabidopsis Root Hairs and Pollen Defines an Apical Growth Signature
transcription profiling by array
Arabidopsis thaliana
16
05/08/2014
-
Transcription profiling by array of dorsal root ganglia (DRG) from conditional SNS-gp130-/- and control (gp130fl/fl) mice
transcription profiling by array
Mus musculus
10
04/08/2014
-
-
Transcription profiling by array of Mrc1+ cardiac tissue macrophage subsets to identify deferentially expressed genes.
transcription profiling by array
Mus musculus
6
04/08/2014
-
-
iPS from healthy control and BMPR2 mutant
transcription profiling by array
Homo sapiens
16
04/08/2014
-
Dissecting the dynamic changes of 5-hydroxymethylcytosine in T cell development and differentiation
ChIP-seq, methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Mus musculus
34
04/08/2014
-
-
Dissecting the dynamic changes of 5-hydroxymethylcytosine in T cell development and differentiation [CMS-Seq]
methylation profiling by high throughput sequencing
Mus musculus
24
04/08/2014
-
-
-
Dissecting the dynamic changes of 5-hydroxymethylcytosine in T cell development and differentiation [MeDIP-Seq]
methylation profiling by high throughput sequencing
Mus musculus
4
04/08/2014
-
-
Dissecting the dynamic changes of 5-hydroxymethylcytosine in T cell development and differentiation [RNA-Seq]
RNA-seq of coding RNA
Mus musculus
2
04/08/2014
-
-
Dissecting the dynamic changes of 5-hydroxymethylcytosine in T cell development and differentiation [ChIP-Seq]
ChIP-seq
Mus musculus
4
04/08/2014
-
-
-
MicroRNAs differentially present in the plasma of HIV elite controllers
transcription profiling by RT-PCR
Homo sapiens
24
04/08/2014
-
-
-
Targeted H3R26 deimination specifically facilitates ER binding by modifying nucleosome structure
ChIP-seq
Homo sapiens
16
04/08/2014
ENA
-
Repeated gestational exposure of mice to chlorpyrifos oxon is associated with paraoxonase 1 (PON1)-modulated effects in maternal and fetal tissues
transcription profiling by array
Mus musculus
60
04/08/2014
-
The photoreceptor chaperone FHY1 has an independent role in gene modulation and plant development under far-red light
ChIP-seq, RNA-seq of coding RNA
Arabidopsis thaliana
10
04/08/2014
-
-
The photoreceptor chaperone FHY1 has an independent role in gene modulation and plant development under far-red light [ChIP-seq]
ChIP-seq
Arabidopsis thaliana
4
04/08/2014
-
-
The photoreceptor chaperone FHY1 has an independent role in gene modulation and plant development under far-red light [RNA-Seq]
RNA-seq of coding RNA
Arabidopsis thaliana
6
04/08/2014
-
-
-
HITS-CLIP reveals key regulators of nuclear receptor signaling in breast cancer.
other, RNA-seq of non coding RNA
Homo sapiens
9
04/08/2014
-
ENA
-
Modulation of the TNF-induced macrophage response by synovial fibroblasts
RNA-seq of coding RNA
Homo sapiens
4
04/08/2014
-
-
-
Association of genes regulated by Ezh2 and trimethylation of histone 3 lysine 27
ChIP-seq, RNA-seq of coding RNA
Mus musculus
16
04/08/2014
-
-
Molecular Mechanisms of Master Regulator VqsM mediating Quorum-sensing and Antibiotic Resistance in Pseudomonas aeruginosa
ChIP-seq
Pseudomonas aeruginosa
4
04/08/2014
-
-
-
RNA-Seq analysis reveals a six-gene SoxR regulon in Streptomyces coelicolor
RNA-seq of coding RNA
Streptomyces coelicolor
6
04/08/2014
-
-
Identification of microRNAs specific for high producer CHO cell lines
transcription profiling by array
Cricetulus griseus
15
04/08/2014
-
Global absolute quantification reveals tight regulation of protein expression in single Xenopus eggs
RNA-seq of coding RNA
Xenopus laevis
13
04/08/2014
-
-
-
Critical role of transient activation of human endogenous retroviruses during reprogramming toward pluripotency
ChIP-seq, RNA-seq of non coding RNA
Homo sapiens
23
04/08/2014
-
-
Critical role of transient activation of human endogenous retroviruses during reprogramming toward pluripotency (RNA-Seq)
RNA-seq of non coding RNA
Homo sapiens
15
04/08/2014
-
-
Critical role of transient activation of human endogenous retroviruses during reprogramming toward pluripotency (Chip-Seq)
ChIP-seq
Homo sapiens
8
04/08/2014
-
-
Unbiased Capture Hi-C reveals the potential targets of breast cancer susceptibility loci
ChIP-seq
Homo sapiens
3
04/08/2014
ENA
-
Transient ER binding and p300 redistribution support a physiological squelching model for immediate ER-repressed genes
ChIP-seq
Homo sapiens
8
04/08/2014
ENA
-
Critical role of transient activation of human endogenous retroviruses during reprogramming toward pluripotency
transcription profiling by array, methylation profiling by array
Homo sapiens
137
04/08/2014
-
Gene expression profiling of Follicular Lymphoma (FL) cultured in the presence or absence of the Follicular Dendritic Cell (FDC) line HK
transcription profiling by array
Homo sapiens
12
04/08/2014
-
Arabidopsis dark-induced senescence: wild type (Col-0) vs. pif quadruple (pif1pif3pif4pif5) mutant
transcription profiling by array
Arabidopsis thaliana
3
04/08/2014
-
Molecular characterization of 4-NQO induced F344 rat tongue carcinogenesis: alteration of multiple gene expression and hypomethylation of PTGS2 proximal promoter
transcription profiling by array
Rattus norvegicus
22
04/08/2014
-
The microRNA bantam regulates a developmental transition in epithelial cells that restricts sensory dendrite growth
transcription profiling by array
Drosophila melanogaster
11
04/08/2014
-
MicroRNA-150 Contributes to the Proficiency of B-Cell Receptor Signaling in Chronic Lymphocytic Leukemia by Regulating Expression of GAB1 and FOXP1 Genes
transcription profiling by array
Homo sapiens
100
04/08/2014
-
Expression data from additional fertilization rice seeds
transcription profiling by array
Oryza sativa Japonica Group
6
04/08/2014
-
Broad shifts in gene expression during early postnatal life are associated with shifts in histone methylation patterns
transcription profiling by tiling array
Mus musculus
48
04/08/2014
-
-
Gene expression profiles of Siglec-14/THP-1 and Siglec-5/THP cell lines, with or without NTHi stimulation
transcription profiling by array
Homo sapiens
4
04/08/2014
-
TM4SF20 is reduced by TGF-β in A549 cells
transcription profiling by array
Homo sapiens
2
04/08/2014
-
A549 cells before/after NME2 induction
ChIP-seq, ChIP-chip by tiling array, transcription profiling by array
Homo sapiens
15
04/08/2014
-
-
Nucleosome positioning in A549 cells before/after NME2 induction
ChIP-chip by tiling array
Homo sapiens
3
04/08/2014
-
-
Genome-wide maps of NME2 in A549 lung adenocarcinoma cells.
ChIP-seq
Homo sapiens
6
04/08/2014
-
-
-
Expression profile of lung adenocarcinoma, A549 cells following induction of non metastatic 2 (NME2/NM23 H2)
transcription profiling by array
Homo sapiens
6
04/08/2014
-
-
Sporadic early-onset colorectal carcinoma is a distinct clinicopathological and molecular entity
transcription profiling by array
Homo sapiens
70
04/08/2014
-