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AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
Immunosuppressive capabilities of mesenchymal stromal cells are maintained under hypoxic growth conditions and after gamma irradiation
transcription profiling by array
Homo sapiens
6
20/01/2015
27
-
Transcription profiling by array of mesenchymal-like mucoepidermoid tumor cells and bone marrow mesenchymal stromal cells
transcription profiling by array
Homo sapiens
6
20/01/2015
-
37
-
The Integrator complex controls the termination of transcription at diverse classes of gene targets
ChIP-seq
Mus musculus
11
20/01/2015
ENA
7
-
Role of the Transcription Factor, Erg, in Chondrocyte Fate Determination during Knee Joint Formation
transcription profiling by array
Mus musculus
8
20/01/2015
8
-
Gene expression classifier in papillary thyroid carcinoma: validation and application of a classifier for prognostication
transcription profiling by array
Homo sapiens
38
20/01/2015
17
-
Track normalization and averaging of epigenetic features across various cell and tissue types derived from Roadmap Epigenomic datasets
ChIP-seq, methylation profiling by high throughput sequencing, unknown experiment type
Homo sapiens
36
20/01/2015
-
18
-
Track normalization and averaging of H3K4me3 ChIP-seq data across various cell and tissue types.
ChIP-seq, unknown experiment type
Homo sapiens
21
20/01/2015
-
12
-
Identification of early response genes to Pratylenchus coffeae in resistant ramie by digital gene expression analysis
RNA-seq of coding RNA
Boehmeria nivea
2
20/01/2015
ENA
-
-
Track normalization and averaging of bislufite-seq DNA methylation data across various cell and tissue types
methylation profiling by high throughput sequencing, unknown experiment type
Homo sapiens
15
20/01/2015
-
5
-
Expression data from the Arabidopsis with freezing treatment following the inhibitors of DNA methylation and histone deacetylation
transcription profiling by array
Arabidopsis thaliana
10
20/01/2015
16
-
Defining CD4 T Cell Memory by the Epigenetic Landscape of CpG DNA Methylation
transcription profiling by array, methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Homo sapiens
58
20/01/2015
5
-
Defining CD4 T Cell Memory by the Epigenetic Landscape of CpG DNA Methylation [Bisulfite-Seq]
methylation profiling by high throughput sequencing
Homo sapiens
24
20/01/2015
ENA
-
-
Defining CD4 T Cell Memory by the Epigenetic Landscape of CpG DNA Methylation [RNA-Seq]
RNA-seq of coding RNA
Homo sapiens
12
20/01/2015
ENA
4
-
Gene expression changes during retinal development and rod specification.
transcription profiling by array
Mus musculus
20
20/01/2015
8
-
Defining CD4 T Cell Memory by the Epigenetic Landscape of CpG DNA Methylation [Affymetrix]
transcription profiling by array
Homo sapiens
22
20/01/2015
5
-
Gene expression profiling of HepG2 cells exposed to Endosulfan
transcription profiling by array
Homo sapiens
4
20/01/2015
18
-
MtDASH Gain and loss of function mutants
transcription profiling by array
Medicago truncatula
13
20/01/2015
9
-
Transcriptome profile of oocytes expressing a catalytically inactive knock-in allele of Ago2
RNA-seq of coding RNA
Mus musculus
14
20/01/2015
ENA
3
-
Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation
ChIP-seq
Mus musculus
15
20/01/2015
ENA
15
-
Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation
methylation profiling by high throughput sequencing
Mus musculus
6
20/01/2015
-
2
-
Gene expression profiles of patients with multiple myeloma who have been treated previously
transcription profiling by array
Homo sapiens
55
20/01/2015
29
-
Genome-wide maps of the effect of antimicrobial compounds in P. putida DOT-T1E
RNA-seq of coding RNA
Pseudomonas putida DOT-T1E
18
20/01/2015
ENA
1
-
Base-resolution maps of 5-formylcytosine and 5-carboxylcytosine reveal genome-wide DNA demethylation dynamics
methylation profiling by high throughput sequencing
Mus musculus
8
20/01/2015
ENA
2
-
Stress-induced endogenous siRNAs targeting regulatory intron sequences in Brachypodium
RNA-seq of non coding RNA
Brachypodium distachyon
8
20/01/2015
ENA
3
-
Targeting EZH2 methyltransferase activity in ARID1A mutated cells as a synthetic lethal therapeutic strategy
transcription profiling by array
Homo sapiens
9
20/01/2015
-
27
-
Investigation of the role of histone modification propagating activity of GLP
ChIP-seq, RNA-seq of coding RNA
, Mus musculus
36
20/01/2015
-
6
-
Gene Expression Analysis of PDAC tumors
transcription profiling by array
Mus musculus
15
20/01/2015
-
18
-
Towards a reference human platelet transcriptome: evaluation of inter-individual correlations and of its relationship with a platelet proteome
transcription profiling by array
Homo sapiens
10
20/01/2015
9
-
Candidatus pelagibacter ubique HTCC1062 requires 4-amino-5-hydroxymethyl-2-methylpyrimidine, an abundant thiamine precursor in the sea
transcription profiling by array
Candidatus Pelagibacter ubique HTCC1062
12
20/01/2015
-
-
Muscle from patients with mitochondrial myopathies and congenital muscular dystrophies versus normal human muscle
transcription profiling by array
Homo sapiens
29
20/01/2015
7
-
Gene expression profile of sporadic and PSEN1 early-onset Alzheimer’s Disease
transcription profiling by array
Homo sapiens
21
20/01/2015
14
-
Identification of novel susceptibility factors in Arabidopsis towards necreotrophic fungal pathogens.
transcription profiling by array
Arabidopsis thaliana
18
20/01/2015
2
-
Effect of Pro- and anti-inflammatory lipids in intracellular survival and killing of mycobacteria
transcription profiling by array
Mus musculus
24
20/01/2015
5
-
Baseline expression from transcriptional profiling of zebrafish developmental stages
RNA-seq of coding RNA
Danio rerio
184
20/01/2015
-
ENA
12
-
Salmonella Typhi RNA study
RNA-seq of coding RNA
Salmonella enterica subsp. enterica serovar Typhi
9
20/01/2015
-
ENA
2
-
Newcastle Disease virus infection in chickens
RNA-seq of coding RNA
Gallus gallus
10
19/01/2015
-
ENA
16
-
Comparative RNAseq analysis of CSF1-stimulated chicken bone marrow-derived macrophages and embryonic RNA
RNA-seq of coding RNA
Gallus gallus
4
19/01/2015
-
ENA
22
-
RNA-seq of coding RNA from bone marrow derived dendritic cells, bone marrow derived macrophages and heterophils isolated from blood of day-old chicks which were control or LPS stimulated
RNA-seq of coding RNA
Gallus gallus
6
19/01/2015
-
ENA
9
-
RNA-seq of chickens 4 days post Bursal Disease Virus infection against uninfected controls
RNA-seq of coding RNA
Gallus gallus
6
19/01/2015
-
ENA
25
RNA-seq of lung and ileum samples at 1 and 3 days post infection (dpi) from ducks infected with either low pathogenic (H5N2) or highly pathogenic (H5N1) avian influenza
RNA-seq of coding RNA
Gallus gallus
36
19/01/2015
-
ENA
8
RNA-seq of lung and ileum samples at 1 and 3 days post infection (dpi) from chickens infected with either low pathogenic (H5N2) or highly pathogenic (H5N1) avian influenza
RNA-seq of coding RNA
Gallus gallus
36
19/01/2015
-
ENA
12
Expression profile in Huh7 cell treated with KRT19 shRNA
transcription profiling by array
Homo sapiens
9
19/01/2015
-
16
-
4C analysis to capture chromatin conformations of the Tfap2c-Bmp7 locus upon different genomic rearrangements in mice
other
Mus musculus
24
19/01/2015
-
ENA
21
-
Heterogeneous CD3 expression levels in differing T-cell subsets account for in vivo anti-CD3-mediated immune resetting
transcription profiling by array
FoxP3-GFP NOD mouse
16
19/01/2015
-
71
-
Transcription profiling by array of MCF-7 and MDA-MB-213 cells treated with docetaxel
transcription profiling by array
Homo sapiens
12
19/01/2015
-
54
-
To detect change of gene expression after knock-down of hormone receptor in hepatocellular carcinoma cell line
transcription profiling by array
Homo sapiens
4
19/01/2015
20
-
To detect change of gene expression after knock-down of hormone receptor in hepatocellular carcinoma cell line [miRNA]
transcription profiling by array
Homo sapiens
2
19/01/2015
12
-
Genetic Variation, Not Cell Type of Origin, Underlies Regulatory Differences in iPSCs
transcription profiling by array, methylation profiling by array
Homo sapiens
48
19/01/2015
23
-
Genetic Variation, Not Cell Type of Origin, Underlies Regulatory Differences in iPSCs [Methylation]
methylation profiling by array
Homo sapiens
24
19/01/2015
5
-
PW1/Peg3 expression regulates the key properties that determine mesoangioblast stem cell competence
transcription profiling by array
Mus musculus
4
19/01/2015
10
-
Transcriptome analyses of dBRWD3 mutant, and dBRWD3, yem double mutant brain
RNA-seq of coding RNA
Drosophila melanogaster
3
19/01/2015
-
ENA
2
-
Knock-in of PIK3CA-H1047R into MCF-10A
RNA-seq of coding RNA
Homo sapiens
25
19/01/2015
-
ENA
25
-
The inactive X chromosome is epigenetically unstable and transcriptionally labile in breast cancer
ChIP-seq, genotyping by array, other, comparative genomic hybridization by array, RNA-seq of coding RNA
Homo sapiens
39
19/01/2015
26
-
Transcriptome analysis of 5 red Italian grapevine varieties during berry development
RNA-seq of coding RNA
Vitis vinifera
60
19/01/2015
-
ENA
2
-
Transcriptome analysis of luminal and basal cell subpopulations in the lactating versus pregnant mammary gland
RNA-seq of coding RNA
Mus musculus
12
19/01/2015
ENA
2
-
Gene expression of T follicular helper (TFH) cells 6 h after ICOS-L blockade
transcription profiling by array
Mus musculus
4
19/01/2015
10
-
Transposon defense by endo-siRNAs, piRNAs and somatic pilRNAs: Roles of Loqs-PD and R2D2
RNA-seq of non coding RNA
Drosophila melanogaster
16
19/01/2015
ENA
9
-
Transcription profiling by array of fetal Th1 lymphocytes following congenital Cytomegalovirus (CMV) infection
transcription profiling by array
Homo sapiens
15
18/01/2015
43
-
Effect of mifepristone on gene expression in Drosophila
RNA-seq of coding RNA
Drosophila melanogaster
18
18/01/2015
-
ENA
-
-
Cytosine methylation data generated by HELP-tagging from human osteosarcoma biopsy samples
methylation profiling by high throughput sequencing
Homo sapiens
30
18/01/2015
ENA
11
-
mRNA expression data from adenoma, gene modified, and colorectal cancer organoid.
transcription profiling by array
Homo sapiens
23
18/01/2015
20
-
Development of mRNA and miRNA expression signatures of MEFs deficient in ER stress mediators for tunicamycin treatment
transcription profiling by array
Mus musculus
96
18/01/2015
1
-
Development of miRNA expression signatures of MEFs deficient in a ER stress mediator ATF6b for tunicamycin treatment
transcription profiling by array
Mus musculus
12
18/01/2015
2
-
Development of miRNA expression signatures of MEFs deficient in a ER stress mediator ATF6a for tunicamycin treatment
transcription profiling by array
Mus musculus
12
18/01/2015
1
-
Development of miRNA expression signatures of MEFs deficient in a ER stress mediator ATF4 for tunicamycin treatment
transcription profiling by array
Mus musculus
12
18/01/2015
1
-
Development of miRNA expression signatures of MEFs deficient in a ER stress mediator XBP1 for tunicamycin treatment
transcription profiling by array
Mus musculus
12
18/01/2015
1
-
Development of mRNA and lincRNA expression signatures of MEFs deficient in ER stress mediators for tunicamycin treatment
transcription profiling by array
Mus musculus
48
18/01/2015
-
-
Gene expression analysis of adipose tissues from WT, Adipo-SIRT1 and Adipo-H363Y mice
transcription profiling by array
Mus musculus
24
17/01/2015
-
17
Systems biology approaches reveal low-dose effects of nanoparticles
RNA-seq of coding RNA
Homo sapiens
9
17/01/2015
ENA
32
Plasma profiling of miRNAs in human specimens from osteosarcoma patients.
transcription profiling by RT-PCR
Homo sapiens
35
17/01/2015
-
27
-
Transcriptomic analysis of prefrontal medial cortex, hippocampus and nucleus accumbens of alcohol-preferring and nonpreferring rats
transcription profiling by array
Rattus norvegicus
18
17/01/2015
5
-
Reciprocal interaction of Wnt and RXR-α pathways in hepatocyte development and hepatocellular carcinoma
transcription profiling by array
Mus musculus
11
17/01/2015
15
-
microRNA profiling by array of primary glioblastoma multiforme samples from patients with different tumor infiltration patterns and epidermal growth factor receptor amplification statuses
microRNA profiling by array
Homo sapiens
30
16/01/2015
48
-
Gene expression profile of corona radiata cells of individual MII oocytes developing into top quality embryos
transcription profiling by array
Homo sapiens
12
16/01/2015
-
21
-
Comparative transcriptome analysis of Shewanella MR-1 under oxic vs. suboxic conditions
RNA-seq of coding RNA
Shewanella oneidensis MR-1
18
16/01/2015
ENA
1
-
Copy number variation in Y chromosome multicopy genes is linked to a paternal parent-of-origin effect on CNS autoimmune disease in female offspring
transcription profiling by array
Mus musculus
15
16/01/2015
20
-
Sperm miRNA expression data from male C57BL/6J, C57BL/6J-ChrY^SJL, and C57BL/6J-ChrY^RF
transcription profiling by array
Mus musculus
9
16/01/2015
4
-
Lymph node CD4+ T cell expression data from naïve female offspring of C57BL/6J and C57BL/6J-ChrY^SJL
transcription profiling by array
Mus musculus
6
16/01/2015
7
-
Deconstruction of DNA methylation patterns during myogenesis reveals specific epigenetic events in the establishment of the skeletal muscle lineage
methylation profiling by high throughput sequencing
Mus musculus
23
16/01/2015
-
ENA
5
-
Common Irf-regulated genomic responses drive pathological inflammation during experimental cerebral malaria as well as protective response against M. tuberculosis
transcription profiling by array
Mus musculus
4
16/01/2015
-
9
-
Genetic Variation, Not Cell Type of Origin, Underlies Regulatory Differences in iPSCs [Expression]
transcription profiling by array
Homo sapiens
24
16/01/2015
-
14
-
Characterization of cyclobutane pyrimidine dimer-dependent modulation of gene expression in human keratinocytes following UVB exposure
transcription profiling by array
Homo sapiens
18
16/01/2015
16
-
Transcriptome analysis of Oshsfa2e mutant plants under controlled drought stress and well-watered conditions at vegetative stage
RNA-seq of coding RNA
Oryza sativa Japonica Group
8
16/01/2015
-
ENA
39
-
Transcriptome analysis of Osbhlh148 mutant plants under controlled drought stress and well-watered conditions at vegetative stage
RNA-seq of coding RNA
Oryza sativa Japonica Group
8
16/01/2015
-
ENA
8
-
Genome-wide transcriptome analysis of rice in response to controlled drought stress at vegetative
RNA-seq of coding RNA
Oryza sativa Japonica Group
4
16/01/2015
-
ENA
6
-
YM155 treated KYSE410
transcription profiling by array
Homo sapiens
4
16/01/2015
7
-
Zinc Finger Protein 407 (ZFP407) Regulates Insulin-Stimulated Glucose Uptake and Glucose Transporter 4 (Glut4) mRNA
RNA-seq of coding RNA
Mus musculus
12
16/01/2015
-
-
-
-
Human Promoters Are Intrinsically Directional
other
Homo sapiens
2
16/01/2015
-
2
-
Identification of genes suppressed by miR-483-5p and miR-551a in a colon cancer cell-line (study 2)
transcription profiling by array
Homo sapiens
4
16/01/2015
-
14
-
Identification of genes suppressed by miR-483-5p and miR-551a in a colon cancer cell-line
transcription profiling by array
Homo sapiens
3
16/01/2015
-
9
-
RNA sequencing (RNA-SEQ) of EPAS1 knockdown by siRNA in endothelial cells
RNA-seq of coding RNA
Homo sapiens, Mus musculus
12
16/01/2015
-
ENA
8
-
Lenti-miR Library WiDR, Pre vs Post Intrahepatic Selection
transcription profiling by array
Homo sapiens
4
16/01/2015
11
-
Lenti-miR Library SW620, Pre vs Post Intrahepatic Selection
transcription profiling by array
Homo sapiens
4
16/01/2015
7
-
Genome-wide sequencing of small RNAs of Echinococcus granulosus shows microRNAs may be involved life cycle stage development and differentiation
RNA-seq of non coding RNA
Echinococcus granulosus
3
16/01/2015
-
-
-
Transcriptome profiling of untreated and doxycycline-treated HeLa/TO-SmN
RNA-seq of coding RNA
Homo sapiens
2
16/01/2015
-
-
3
-
Gene expression signature of carcinoma cell response to extracellular matrix
transcription profiling by array
Homo sapiens
20
16/01/2015
22
-
Global gene expression of nasal epithelial cells in patients with seasonal allergic rhinitis
transcription profiling by array
Homo sapiens
12
16/01/2015
-
8
-
Small RNA-Seq of Wolbachia infected and uninfected spider mites
RNA-seq of non coding RNA
Tetranychus urticae
4
15/01/2015
-
ENA
17
-
Transcription profiling by array of fracture callus obtained from rats treated with sponges loaded either with GDF5wt or GDF5N445T and sacrificed at day 3, 5, 7 and 14 post-operation
transcription profiling by array
Rattus norvegicus
12
15/01/2015
35
-
RNA-seq of coding RNA from maize inbred line Q139 leaf 12, 20 and 29 days post-anthesis
RNA-seq of coding RNA
Zea mays
3
15/01/2015
ENA
42
-
Combined inhibition of TGFβ and PDGF signaling attenuates radiation-induced pulmonary fibrosis
transcription profiling by array
Mus musculus
24
15/01/2015
14
-
Transcriptome analysis of plant sulphate starvation and resupply
transcription profiling by array
Arabidopsis thaliana
8
15/01/2015
33
-
Rapid increase of fibroblast growth factor 21 under protein malnutrition and its impact on growth and lipid metabolism
transcription profiling by array
Rattus norvegicus
6
15/01/2015
10
-
Expression data from Arabidopsis wild-type (Col-0) and KO-nudx19 plants, which lacks nudix hydrolase 19, a NADPH hydrolase
transcription profiling by array
Arabidopsis thaliana
4
15/01/2015
21
-
Human induced pluripotent stem cells generated from intervertebral disc cells improve neurologic functions in spinal cord injury
transcription profiling by array
Homo sapiens
3
15/01/2015
-
8
-
Comprehensive transcriptional profiling analysis reveals candidate regulators in cold-stressed seedlings of Petunia hybrida
transcription profiling by array
Petunia x hybrida
15
15/01/2015
10
-
Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
transcription profiling by array
Homo sapiens
94
15/01/2015
49
-
Msi2 sustains the MLL leukemia stem cell regulatory program
RNA-seq of coding RNA
Mus musculus
4
15/01/2015
-
22
-
Long term culture of genome-stable bipotent progenitor cells from adult human liver
transcription profiling by array
Homo sapiens
19
15/01/2015
17
-
Aberrant splicing of U12-type introns is the hallmark of ZRSR2 mutant myelodysplastic syndrome
RNA-seq of coding RNA
Homo sapiens
22
15/01/2015
-
18
-
Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma (ChIP-Seq, FAIRE-Seq)
ChIP-seq
Homo sapiens
93
15/01/2015
-
30
-
Enhancer Sequence Variants and Transcription Factor Deregulation Synergize to Construct Pathogenic Regulatory Circuits in B Cell Lymphoma (RNA-Seq)
RNA-seq of coding RNA
Homo sapiens
14
15/01/2015
-
21
-
Mutation independent activation of the Notch pathway is associated with Lapatinib resistance in Her2+ breast cancer cell lines
RNA-seq of coding RNA
Homo sapiens
7
15/01/2015
-
-
22
-
Global mapping of ribonucleotides embedded in DNA
other
Saccharomyces cerevisiae
9
15/01/2015
-
17
-
Auxin Induced Endodermal to QC Transdifferentiation Time Series and Downsteam of JKD Analysis
transcription profiling by array
Arabidopsis thaliana
26
15/01/2015
34
-
RNA-Sequencing of lean, intermediate, and obese pigs
RNA-seq of coding RNA
Sus scrofa
36
15/01/2015
-
-
16
-
Identification of DEK as a potential therapeutic target for Neuroendocrine prostate cancer
transcription profiling by array
Homo sapiens
4
15/01/2015
30
-
Expression data from aortic smooth muscle cells (AoSMC) and myofibroblasts (FB) isolated respectively from the ascending aortas and the aortic valves of bicuspid (BAV) and tricuspid aortic valve (TAV) patients
transcription profiling by array
Homo sapiens
54
15/01/2015
25
-
The high-resolution methylome of the ecological sentinel species Daphnia pulex identifies mosaic patterns of cytosine methylation that overlap with its unique genomic structure
methylation profiling by high throughput sequencing
Daphnia pulex
3
15/01/2015
-
11
-
Identification of genes enriched in the Arc, VMH, DMH and LH of adult mouse
transcription profiling by array
Mus musculus
8
15/01/2015
12
-
Detained introns are novel, widespread class of posttranscriptionally-spliced introns
RNA-seq of coding RNA
Mus musculus
9
15/01/2015
-
9
-
Distinct human stem cell populations in small and large intestine
transcription profiling by array
Homo sapiens
12
15/01/2015
57
-
Identification of miRNAs that regulate Colorectal Cancer Metastasis
transcription profiling by array
Homo sapiens
15
15/01/2015
15
-
Runx+ HSPC, kdrl+ endothelial, and negative cells sorted from DMSO- or Lycorine-treated 3 dpf zebrafish embryos
transcription profiling by array
Danio rerio
18
15/01/2015
13
-
Oxidative Stress Mechanisms of Hydroxyurea-Induced Developmetal Toxicity in Organogenesis Stage Mouse Embryos
transcription profiling by array
Mus musculus
12
15/01/2015
6
-
Expression of microRNAs in rat kidney treated with a carcinogenic dose of Aristolochic Acid
RNA-seq of non coding RNA
Rattus norvegicus
8
15/01/2015
-
-
17
-
Molecular regulation of acute kidney injury
transcription profiling by array
Homo sapiens
72
15/01/2015
19
-
Molecular regulation of acute kidney injury (miRNA)
transcription profiling by array
Homo sapiens
36
15/01/2015
12
-
Molecular regulation of acute kidney injury (mRNA)
transcription profiling by array
Homo sapiens
36
15/01/2015
24
-
Impact of NRT1.1 point mutants on gene expression under high NH4NO3 supply
transcription profiling by array
Arabidopsis thaliana
18
15/01/2015
53
-
Increase in membrane cholesterol of neurons in culture recapitulates Alzheimer’s disease early phenotypes.
transcription profiling by array
Rattus norvegicus
8
15/01/2015
2
-
BAR-ChIP on yeast chromatin associated mutants
ChIP-seq
Saccharomyces cerevisiae
162
14/01/2015
-
ENA
29
-
RNA-seq of coding RNA from tissue samples of 122 human individuals representing 32 different tissues.
RNA-seq of coding RNA
Homo sapiens
198
14/01/2015
-
ENA, ENA
796
Exon-based transcription profiling of early molecular response in DLBCL/FL3B patients
transcription profiling by array
Homo sapiens
16
14/01/2015
35
-
Dynamic nature of epigenetic patterns observed during the Mars 520-d mission simulation
methylation profiling by array
Homo sapiens
36
14/01/2015
14
-
Expression data from mouse proprioceptive sensory neuron subclasses.
transcription profiling by array
Mus musculus
6
14/01/2015
9
-
DNA methylation in newborn cordblood
methylation profiling by array
Homo sapiens
216
14/01/2015
32
-
Effect of mini-chromosome maintenance protein 2 deficiency on the locations of DNA replication origins
ChIP-seq, other
Mus musculus
4
14/01/2015
-
30
-
PlGF-1 and -2 induce hyperplasia and invasiveness of primary rheumatoid synoviocytes
transcription profiling by array
Homo sapiens
8
14/01/2015
45
-
Expression data from chimeric antigen receptor transduced (CAR) human CD4+ T cells during expansion
transcription profiling by array
Homo sapiens
30
14/01/2015
24
-
NSCLC Driven by DDR2 Mutation is Sensitive to JQ1 and Dasatinib Combination Therapy
transcription profiling by array
Mus musculus
5
14/01/2015
42
-
Knockout mice lacking MG56
transcription profiling by array
Mus musculus
4
14/01/2015
6
-
Genome-wide mapping of transcription start sites in a ∆set2 strain
other
Saccharomyces cerevisiae
4
14/01/2015
-
1
-
Model-driven mapping of transcriptional networks reveals the circuitry and dynamics of virulence regulation
ChIP-seq, RNA-seq of coding RNA
Cryptococcus neoformans
320
14/01/2015
-
3
-
Dnmt3L-histone H3 binding is necessary for male fertility and non-CG methylation
methylation profiling by high throughput sequencing
Mus musculus
2
14/01/2015
-
10
-
Patterns of gene expression associated with recovery and injury in heat-stressed rats
transcription profiling by array
Rattus norvegicus
140
14/01/2015
6
-
MicroRNA Profiling of Laser-Microdissected Hepatocellular Carcinoma Reveals an Oncogenic Phenotype of the Tumor Capsule
transcription profiling by array
Homo sapiens
24
14/01/2015
26
-
siRNAs in C2C12
transcription profiling by array
Mus musculus
12
14/01/2015
-
17
-
EpiSC RNAseq
RNA-seq of coding RNA
Mouse
33
14/01/2015
-
ENA
7
-
Olfactory transcriptomics in mammals
RNA-seq of coding RNA
Bos taurus, Callithrix jacchus, Homo sapien, Macaca mulatta
48
14/01/2015
-
ENA
10
-
The Architecture and Evolution of Cancer Neochromosomes
methylation profiling by array
Homo sapiens
6
13/01/2015
-
17
-
Profiling of miR-148a responsive genes in HeLa cells
transcription profiling by array
Homo sapiens
6
13/01/2015
20
-
Gastric carcinoma patients and healthy subjects
transcription profiling by array
Homo sapiens
5
13/01/2015
28
-
Identification of a plasma four-microRNA panel as a potential noninvasive biomarker for osteosarcoma
transcription profiling by RT-PCR
Homo sapiens
2
13/01/2015
-
17
-
Skeletal muscle profiling in HMDP (high-fat/high-sucrose diet)
transcription profiling by array
Mus musculus
112
13/01/2015
-
31
-
Microarray analysis on livers of young Nile rats fed palm fruit juice
transcription profiling by array
Arvicanthis niloticus
7
13/01/2015
-
7
-
To detect change of gene expression after knock-down of hormone receptor in hepatocellular carcinoma cell line
transcription profiling by array
Homo sapiens
2
13/01/2015
22
-
Expression data from Plasmodium falciparum schizonts
transcription profiling by array
Plasmodium falciparum
4
13/01/2015
7
-
Maternal peripheral blood natural killer cells incorporate placenta-associated microRNAs during pregnancy
transcription profiling by array
Homo sapiens
10
13/01/2015
7
-
Hematopoietic differentiation of human embryonic stem cells - timecourse and d7 CD34 and CD41 fractions
transcription profiling by array
Homo sapiens
13
13/01/2015
8
-
The bZIP transcription factor Atf1 governs the oxidative stress response and sexual differentiation of Cryptococcus neoformans downstream of the HOG pathway
transcription profiling by array
Cryptococcus neoformans var. grubii
11
13/01/2015
3
-
Transcriptional response to UV treatment in several Arabidopsis thaliana accessions
RNA-seq of coding RNA
Arabidopsis thaliana
22
13/01/2015
-
-
25
-
Functional heterogeneity of human memory T cell clones primed by pathogens or vaccines
other
Homo sapiens
42
13/01/2015
-
16
-
Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and cardiac-specific Bmi1 deletion
RNA-seq of coding RNA
Mus musculus
6
13/01/2015
-
-
8
-
Analysis of wildtype and Csnk2b-deficient Foxp3+ regulatory T cells transcriptomes
RNA-seq of coding RNA
Mus musculus
4
13/01/2015
-
1
-
Effect of Drosophila immune proteins on gene expression in E. coli
transcription profiling by array
Escherichia coli
6
13/01/2015
14
-
Genome-wide map of H3K4me3 and PRDM9-binding in 12 day post-partum mouse spermatocytes
ChIP-seq
Mus musculus
26
13/01/2015
-
-
7
-
Expression Profiles of HepG2 cells treated with following compounds: Azathriopine, Furan, Tetradecanoyl phorbol acetate, Tetrachloroethylene, Diazinon and Dmannitol
transcription profiling by array
Homo sapiens
135
13/01/2015
34
-
Role of smooth muscle cell autophagy in atherosclerosis
transcription profiling by array
Mus musculus
4
13/01/2015
10
-
Gene expression profiles of E8.5, E9.5 and E11.5 kidney precursors
transcription profiling by array
Mus musculus
7
13/01/2015
27
-
IGR_U985_RNASeq
RNA-seq of coding RNA
Homo sapiens
21
12/01/2015
-
ENA
45
DNA-seq of exome sequences from tumor cells and T-lymphocytes in 24 chronic lymphocytic leukemia patients to predict somatic mutations in 24 CLL patients (17 IGHV-unmutated and 7 IGHV-mutated)
DNA-seq
Homo sapiens
48
12/01/2015
-
ENA
58
-
Transcription profiling by array of aorta from ApoE-/- mice exposed to mainstream cigarette smoke for 30 days
transcription profiling by array
Mus musculus
18
12/01/2015
32
-
Tet-mediated imprinting erasure following reprogramming of spermatogonial stem cells to induced pluripotent stem cells
RNA-seq of coding RNA
Mus musculus
9
12/01/2015
-
-
3
-
Saccharomyces cerevisiae: DSB mapping by Break-chip in a two-color experiment (G1 control vs. S phase samples)
other
Saccharomyces cerevisiae
2
12/01/2015
3
-
Break-Seq and RNA-seq analysis of gene expression during and after exposure to hydroxyurea in WT and mec1 cells in Saccharomyces cerevisiae
other, RNA-seq of coding RNA
Saccharomyces cerevisiae
23
12/01/2015
6
-
RNA-seq analysis of gene expression during and after exposure to hydroxyurea in WT and mec1 cells in Saccharomyces cerevisiae
RNA-seq of coding RNA
Saccharomyces cerevisiae
8
12/01/2015
-
-
3
-
Transcriptome Analysis of the Basal Chordate Botryllus schlosseri Reveals a Set of Genes Associated with Fertility
RNA-seq of coding RNA
Botryllus schlosseri
42
12/01/2015
-
-
13
-
Break-Seq of DNA double stranded breaks in Saccharomyces cerevisiae WT and mec1 cells after exposure to hydroxyurea
other
Saccharomyces cerevisiae
13
12/01/2015
-
4
-
Retinoic acid induces Snai1 in stem cells of the preimplantation blastocyst to initiate differentiation
transcription profiling by array
Mus musculus
6
12/01/2015
-
9
-
Transcriptome reorganization of gene-rewired Escherichia coli cells in response to histidine depletion
transcription profiling by tiling array
Escherichia coli
90
12/01/2015
-
3
-
Genomewide methylation analysis in Silver Russell syndrome patients
methylation profiling by array
Homo sapiens
24
12/01/2015
9
-
Noncoding RNA transcriptome analysis during cellular reprogramming
RNA-seq of coding RNA, RNA-seq of non coding RNA
Mus musculus
95
12/01/2015
-
9
-
Genome-wide analysis of SIK2 regulated genes and pathways
transcription profiling by array
Homo sapiens
56
12/01/2015
-
-
22
-
Comparison of Control and Tim-Fbl gene expression profiles
transcription profiling by array
Drosophila melanogaster
6
12/01/2015
41
-
ARSD expression correlates with IgVH mutational status, ZAP-70 and disease progression in chronic lymphocytic leukemia
transcription profiling by array
Homo sapiens
112
12/01/2015
35
-
Gene expression profile of osteogenically differentiated human adipose-derived stem cells
transcription profiling by array
Homo sapiens
6
11/01/2015
8
-
Combinatorial activities of SHORT VEGETATIVE PHASE and FLOWERING LOCUS C define distinct modes of flowering regulation in Arabidopsis
transcription profiling by array
Arabidopsis thaliana
48
11/01/2015
19
-
Combinatorial activities of SHORT VEGETATIVE PHASE and FLOWERING LOCUS C define distinct modes of flowering regulation in Arabidopsis
ChIP-seq
Arabidopsis thaliana
18
11/01/2015
-
-
13
-
Gene expression profiles after injection of zebrafish with NV (non virion) recombinant protein from Viral Hemorrhagic Septicemia Virus (VHSV)
transcription profiling by array
Danio rerio
8
11/01/2015
4
-
Transcriptional interaction network analyses in dorsal nucleus of vagus nerve, locus coeruleus and substantia nigra in Parkinson's disease
transcription profiling by array
Homo sapiens
41
11/01/2015
49
-
Transcription profiling by array of human quiescent CD4 T-cell subsets in asymptomatic HIV-infected individuals, HIV-infected viremic individuals and uninfected individuals
transcription profiling by array
Homo sapiens
80
10/01/2015
-
35
-
Transcription profiling by array of 3 week old Sirt6 -/- and WT mouse hepatocytes to identify differentially regulated genes
transcription profiling by array
Mus musculus
2
10/01/2015
-
9
-
Rat Life Cycle Kidney miRNA Expression Data
transcription profiling by array
Rattus norvegicus
74
10/01/2015
3
-
microRNA expression profiling of different T cell subset in human tonsils
transcription profiling by array
Homo sapiens
16
10/01/2015
6
-
Peripheral regions and central regions from HT-29 tumors
transcription profiling by array
Homo sapiens
6
10/01/2015
5
-
Expression data from H295R_GRα cells following treatment with dexamethasone or RU486
transcription profiling by array
Homo sapiens
18
10/01/2015
22
-
Expression data from the T-DNA insertion line atpip1;2-1
transcription profiling by array
Arabidopsis thaliana
6
10/01/2015
1
-
LDLR-/- mice aorte: Control vs DHA
transcription profiling by array
Mus musculus
8
10/01/2015
10
-
Transcriptome analysis of in vitro MSC-derived osteoblastic cells from patients with Primary Myelofibrosis
transcription profiling by array
Homo sapiens
20
10/01/2015
25
-
Transcriptome analysis of bone marrow mesenchymal stromal cells from patients with Primary Myelofibrosis
transcription profiling by array
Homo sapiens
12
10/01/2015
22
-
Transcriptomic changes in aquaporin PIP1;2 deficient Arabodposis plants
RNA-seq of coding RNA
Arabidopsis thaliana
2
10/01/2015
-
7
-
IGR_JUNCONCO_STUDY_LM
transcription profiling by array
Homo sapiens
12
09/01/2015
-
43
-
Transcription profiling by array of immature and activated bone-marrow (BM) derived conventional DCs (BM-cDCs) and plasmacytoid DCs (BM-pDCs) from wild-type and miR155-/- mice over a 24-hour time course
transcription profiling by array
Mus musculus
36
09/01/2015
18
-
Transcriptome analysis of lungs from six different mouse strains after infection with highly pathogenic H5N1 influenza A virus
transcription profiling by array
Mus musculus
104
09/01/2015
-
3
-
Transcriptome analysis of lungs from six different mouse strains after infection with highly pathogenic H5N1 influenza A virus [set 2]
transcription profiling by array
Mus musculus
35
09/01/2015
-
2
-
Transcriptome analysis of lungs from six different mouse strains after infection with highly pathogenic H5N1 influenza A virus [set 1]
transcription profiling by array
Mus musculus
69
09/01/2015
-
3
-
Type I interferon regulates the expression of long non-coding RNAs
transcription profiling by array, RNA-seq of coding RNA
Homo sapiens
8
09/01/2015
17
-
Type I interferon regulates the expression of long non-coding RNAs [RNA-seq]
RNA-seq of coding RNA
Homo sapiens
2
09/01/2015
-
27
-
Type I interferon regulates the expression of long non-coding RNAs [expression array]
transcription profiling by array
Homo sapiens
6
09/01/2015
28
-
Genetic Loci that Regulate Ectopic Calcification in Response to Knee Trauma in LG/J by SM/J Advanced Intercross Mice
other
Mus musculus
38
09/01/2015
-
3
-
A Long Noncoding RNA Acts as a Tumor Suppressor in Esophageal Squamous Cell Carcinoma
transcription profiling by array
Homo sapiens
6
09/01/2015
20
-
Dynamic response of P. putida S12 and S12ΔtrgI to sudden addition of toluene
transcription profiling by array
Pseudomonas putida S12
24
09/01/2015
1
-
Adiponectin improves local lipid metabolism in regenerating pancreatic islets after β-cell ablation
RNA-seq of coding RNA
Mus musculus
2
09/01/2015
-
-
4
-
The effects of moderate weight gain in adipose tissue gene expression in metabolically-normal (MNO) and metabolically-abnormal (MAO) subjects
transcription profiling by array
Homo sapiens
36
09/01/2015
24
-
Human Herpesvirus 6A encoded miRNAs: A role in viral lytic replication
RNA-seq of non coding RNA
Homo sapiens
1
09/01/2015
-
23
-
Identification of apple miRNAs and their potentialrole in Fire Blight resistance
RNA-seq of non coding RNA
Malus domestica
12
09/01/2015
-
-
3
-
Expression profile for BW25113 ΔmqsRA with deoxycholate stress
transcription profiling by array
Escherichia coli BW25113
2
09/01/2015
13
-
X-chromosome dynamics revealed by the RNA interactome and chromosomal binding of CTCF
ChIP-seq, RNA-seq of coding RNA
Mus musculus
16
09/01/2015
-
6
-
Gene transcript alterations exhibited in luminal and basal epithelial compartments with impaired Ror2 signaling
transcription profiling by array
Mus musculus
11
09/01/2015
1
-
Expression profile for PA14 lasR rhlR double mutant with H2O2 stress
transcription profiling by array
Pseudomonas aeruginosa
4
09/01/2015
12
-
Stretch responsive miRNAs in human aortic valve interstitial cells
RNA-seq of non coding RNA
Homo sapiens
12
09/01/2015
-
-
5
-
Comparison of human aortic valve interstitial cells (AVICs) exposed to cyclic stretch to static samples
transcription profiling by array
Homo sapiens
6
09/01/2015
9
-
Differential Gene Expression Profile in the Rat Caudal Vestibular Nucleus is Associated with Individual Differences in Motion Sickness Susceptibility
transcription profiling by array
Rattus norvegicus
9
08/01/2015
-
9
-
Analysis of conditions leading to 3'UTR ribosome protected footprints
RNA-seq of coding RNA
Drosophila melanogaster, Homo sapiens
11
08/01/2015
-
ENA
27
-
Gene expression profiles of sorted fetal blood Vg9Vd2 gd T cells, nonVg9Vd2 gd T cells and ab T cells in Homo sapiens
transcription profiling by array
Homo sapiens
12
08/01/2015
-
24
-
Ribosome profiling with MN and RNaseI
translation profiling
Drosophila melanogaster, Homo sapiens
4
08/01/2015
-
ENA
46
-
Transcription profiling by array of bone tissues of wild type and Arhga28del mice
transcription profiling by array
Mus musculus
6
08/01/2015
16
-
Expression Profiling In HMDP (high-fat/high-sucrose diet)
transcription profiling by array
Mus musculus
872
08/01/2015
14
-
Liver Profiling In HMDP (high-fat/high-sucrose diet)
transcription profiling by array
Mus musculus
433
08/01/2015
10
-
Gonadal Adipose Tissue Profiling In HMDP (high-fat/high-sucrose diet)
transcription profiling by array
Mus musculus
439
08/01/2015
9
-
Expression data from normal myometrium, leiomyomata, and leiomyosarcomas
transcription profiling by array
Homo sapiens
79
08/01/2015
38
-
Expression Data from Gastrointestinal Stromal Tumor (GIST) Cell Lines
transcription profiling by array
Homo sapiens
4
08/01/2015
27
-
Gene expression data from transgenic and knockout mice
transcription profiling by array
Mus musculus
6
08/01/2015
51
-
Global transcriptome analysis identifies shade avoidance-related genes regulated by BBX24 in Arabidopsis thaliana
transcription profiling by array
Arabidopsis thaliana
8
08/01/2015
26
-
Expression comparison of mutant EGFR-driven gliomas with relapse tumors upon mutant EGFR ablation
transcription profiling by array
Mus musculus
6
08/01/2015
17
-
Lung expression data from highly pathogenic H5N1 virus infected and uninfected mice
transcription profiling by array
Mus musculus
37
08/01/2015
21
-
The porcine microRNA transcriptome response to transmissible gastroenteritis virus infection
RNA-seq of non coding RNA
Sus scrofa
2
08/01/2015
-
-
2
-
Interferon lambda restricts West Nile virus neuroinvasion by enhancing integrity of the blood-brain barrier
RNA-seq of coding RNA
Mus musculus
3
08/01/2015
-
6
-
Identification of molecules from dying cells that act as signals to promote proliferation of surrounding cells
transcription profiling by array
Rattus norvegicus
4
08/01/2015
6
-
Gene expression profiles reveal the effect of a high-fat diet in brown fat development
transcription profiling by array
Mus musculus
33
08/01/2015
-
23
-
Functional characterization of C. elegans Y-box binding proteins reveals tissue-specific functions and a critical role in the formation of polysomes
transcription profiling by tiling array, other, RNA-seq of coding RNA
Caenorhabditis elegans
32
08/01/2015
-
11
-
Polysome profiling of glp-4 mutant animals
transcription profiling by tiling array
Caenorhabditis elegans
8
08/01/2015
-
6
-
Functional characterization of C. elegans Y-box binding proteins reveals tissue-specific functions and a critical role in the formation of polysomes (ribosome)
other, RNA-seq of coding RNA
Caenorhabditis elegans
4
08/01/2015
-
-
7
-
Functional characterization of C. elegans Y-box binding proteins reveals tissue-specific functions and a critical role in the formation of polysomes (RNA-Seq)
RNA-seq of coding RNA
Caenorhabditis elegans
4
08/01/2015
-
-
10
-
Defining soma-specific/enriched and germline-specific/enriched transcripts
RNA-seq of coding RNA
Caenorhabditis elegans
4
08/01/2015
-
-
6
-
Functional characterization of C. elegans Y-box binding proteins reveals tissue-specific functions and a critical role in the formation of polysomes (RIP-Seq)
other, RNA-seq of coding RNA
Caenorhabditis elegans
12
08/01/2015
-
-
11
-
Hepatic transcriptome changes in testosterone-deficient pigs fed a high-fat diet
RNA-seq of coding RNA
Sus scrofa
3
08/01/2015
-
18
-
Age-associated Changes in Basal NF-κB Function in Human CD4+ T Lymphocytes via Dysregulation of PI3 Kinase
transcription profiling by array
Homo sapiens
141
08/01/2015
-
15
-
Age-associated Changes in Basal NF-κB Function in Human CD4+ T Lymphocytes via Dysregulation of PI3 Kinase (dataset 5)
transcription profiling by array
Homo sapiens
10
08/01/2015
-
6
-
Age-associated Changes in Basal NF-κB Function in Human CD4+ T Lymphocytes via Dysregulation of PI3 Kinase (dataset 4)
transcription profiling by array
Homo sapiens
32
08/01/2015
-
3
-
Age-associated Changes in Basal NF-κB Function in Human CD4+ T Lymphocytes via Dysregulation of PI3 Kinase (dataset 3)
transcription profiling by array
Homo sapiens
45
08/01/2015
-
1
-
Age-associated Changes in Basal NF-κB Function in Human CD4+ T Lymphocytes via Dysregulation of PI3 Kinase (dataset 2)
transcription profiling by array
Homo sapiens
23
08/01/2015
-
4
-
Age-associated Changes in Basal NF-κB Function in Human CD4+ T Lymphocytes via Dysregulation of PI3 Kinase (dataset 1)
transcription profiling by array
Homo sapiens
31
08/01/2015
-
5
-
A systems approach identifies networks and genes linking sleep and stress: implications for neuropathology
RNA-seq of coding RNA
Mus musculus
100
08/01/2015
-
-
2
-
Drug effects on hippocampal microRNA profiles after traumatic brain injury
transcription profiling by array
Rattus norvegicus
32
08/01/2015
5
-
miRNA expression of whole hippocampus 24hr post-injury in rat
transcription profiling by array
Rattus norvegicus
16
08/01/2015
6
-
Gene expression of whole hippocampus 24hr post-injury in rat
transcription profiling by array
Rattus norvegicus
16
08/01/2015
5
-
CD14 and complement crosstalk and largely mediate the transcriptional response to Escherichia coli in human whole blood as revealed by DNA microarray
transcription profiling by array
Homo sapiens
73
08/01/2015
26
-
RNA-Seq Based Reconstruction of the Phylogenetic Tree of the Genus Flaveria (Asteraceae)
RNA-seq of coding RNA
Flaveria angustifolia, Flaveria bidentis, Flaveria brownii, Flaveria cronquistii, Flaveria kochiana, Flaveria palmeri, Flaveria pringlei, Flaveria pubescens, Flaveria sonorensis, Flaveria trinervia, Flaveria vaginata, Helenium autumnale, Tanacetum parthenium, Tragopogon dubius
21
08/01/2015
-
-
10
-
De Novo Transcriptome Sequencing for Tetramorium bicarinatum: The first comprehensive venom gland transcriptome analysis from an ant species.
RNA-seq of coding RNA
Tetramorium bicarinatum
2
08/01/2015
-
-
2
-
Microarray analysis of the Asian seabass (Lates calcarifer) brains
transcription profiling by array
Lates calcarifer
8
08/01/2015
-
-
Microarray analysis of the Asian seabass (Lates calcarifer) gonads
transcription profiling by array
Lates calcarifer
22
08/01/2015
2
-
Gene Expression Test for Operational Renal Allograft Tolerance
transcription profiling by array
Homo sapiens
31
08/01/2015
36
-
The Microbial Metabolite Deoxycholic Acid Modulates Cholesterol Metabolism in the Germ-Free Mouse
transcription profiling by array
Mus musculus
6
08/01/2015
24
-
Time series transcription factor binding events during Th2 differentiation
ChIP-seq
Mus musculus
20
08/01/2015
-
ENA
5
-
Transcriptome profiling of mutants from the zebrafish mutation project
RNA-seq of coding RNA
Danio rerio
94
08/01/2015
-
ENA
2
-
RNA-Seq of wild-type HEK293 and K562 celllines
RNA-seq of coding RNA
Homo sapiens
4
07/01/2015
-
ENA
56
-
Mithramycin Depletes Sp1 and Activates p53 to Mediate Senescence and Apoptosis of Pleural Mesothelioma Cells
transcription profiling by array
Homo sapiens
45
07/01/2015
67
-
Gene expression profiling of prefrontal cortices of mice subjected to acute and chronic social stress
transcription profiling by array
Mus musculus
20
07/01/2015
1
-
Expression data from RhoA-null and wildtype keratinocytes
transcription profiling by array
Mus musculus
10
07/01/2015
6
-
The identification of differentially downregulated genes in hypoxia or G9a overexpression.
transcription profiling by array
Homo sapiens
3
07/01/2015
5
-
A Novel Plasmodium Falciparum Bromodomain Protein Regulates Invasion Gene Expression
transcription profiling by array
, Plasmodium falciparum 3D7
44
07/01/2015
6
-
Whole genome expression profiling across the life cycle of PfBDP1 overexpressing P. falciparum malaria parasites
transcription profiling by array
Plasmodium falciparum 3D7
8
07/01/2015
2
-
Whole genome expression profiling across the asexual life cycle in PfBDP1 knockdown malaria parasites
transcription profiling by array
, Plasmodium falciparum 3D7
36
07/01/2015
3
-
Altering cancer transcriptomes using epigenomic inhibitors
transcription profiling by array, RNA-seq of coding RNA
Homo sapiens
18
07/01/2015
23
-
Altering cancer transcriptomes using epigenomic inhibitors [Illumina beadchip]
transcription profiling by array
Homo sapiens
12
07/01/2015
15
-
Altering cancer transcriptomes using epigenomic inhibitors [RNA-Seq]
RNA-seq of coding RNA
Homo sapiens
6
07/01/2015
-
-
23
-
Open chromatin mapping identifies transcriptional networks regulating human epididymis epithelial function [Agilent expression]
transcription profiling by array
Homo sapiens
4
07/01/2015
4
-
Open chromatin mapping identifies transcriptional networks regulating human epididymis epithelial function
ChIP-seq, transcription profiling by array, RNA-seq of coding RNA
Homo sapiens
14
07/01/2015
8
-
Open chromatin mapping identifies transcriptional networks regulating human epididymis epithelial function [Dnase-Seq]
ChIP-seq
Homo sapiens
2
07/01/2015
-
-
2
-
Open chromatin mapping identifies transcriptional networks regulating human epididymis epithelial function [Rnase-Seq]
RNA-seq of coding RNA
Homo sapiens
8
07/01/2015
-
-
2
-
Human MCF-7 breast cancer cells: control vs. treated with conditioned medium of cancer associated adipose tissue
transcription profiling by array
Homo sapiens
4
07/01/2015
25
-
Detecting differential peaks in ChIP-seq signals with ODIN
ChIP-seq
Mus musculus
8
07/01/2015
-
7
-
Complement Roles Revealed by Immune Gene Profiling in Endometriosis and Endometriosis-Associated Ovarian Cancer
other
Homo sapiens
119
07/01/2015
-
24
-
Localization and Abundance Analysis of Human lncRNAs at Single Cell and Single Molecule Resolution
RNA-seq of coding RNA, unknown experiment type, RNA-seq of non coding RNA
Homo sapiens
7
07/01/2015
-
-
16
-
A platform of patient-derived tumor xenografts (EOC-xenografts) to recapitulate the clinicopathology and genetic alterations of ovarian cancer
transcription profiling by array
Homo sapiens
71
07/01/2015
38
-
Next-Generation Sequencing Identifies Differentially Expressed Genes in Embryonic Hearts Following Caffeine Treatment
RNA-seq of coding RNA
Mus musculus
5
07/01/2015
-
-
2
-
Next Generation Sequencing identifying the dosage compensation state in human endometrial carcinoma and adjacent tissues
RNA-seq of coding RNA
Homo sapiens
18
07/01/2015
-
18
-
Transcription profile of SSEA-3-positive population of MSCs
transcription profiling by array
Homo sapiens
2
07/01/2015
4
-
Geminin regulates self-renewal and fate commitment decisions in fetal hematopoietic stem cells.
transcription profiling by array
Mus musculus
6
07/01/2015
17
-
RNA-seq analysis of differential gene expression in muscle from angus beef steers undergoing diet restriction and compensatory growth
RNA-seq of coding RNA
Bos taurus
28
07/01/2015
-
5
-
TRIM28 silences endogenous retroviruses in neural progenitor cells
RNA-seq of coding RNA
Mus musculus
6
07/01/2015
-
-
7
-
Identification of oral carcinoma miRNA involved in Wnt/b-catenin signaling
transcription profiling by array
Homo sapiens
80
07/01/2015
-
32
-
Genome instability of the segmentally aneuploidy progeny
comparative genomic hybridization by array
Trichoderma reesei
9
07/01/2015
-
-
Gene copy analysis of the F1 haploid progeny generated by Hypocrea jecorina CBS999.9 sexual development
comparative genomic hybridization by array
Trichoderma reesei
37
07/01/2015
2
-
Identification of radiation resistence genes by shRNA screen
comparative genomic hybridization by array
Homo sapiens
2
06/01/2015
-
26
-
Advanced Age is Associated with Worsened Outcomes and a Unique Genomic Response in Severely Injured Patients with Hemorrhagic Shock
transcription profiling by array
Homo sapiens
495
06/01/2015
4
-
Gene expression profiles of hexadecyl-4-124I-iodobenzoate(124I-HIB)-labeled adipose-derived stem cells (ADSCs) in vitro and in vivo
transcription profiling by array
Rattus norvegicus
6
06/01/2015
4
-
Hepatitis C virus functionally sequesters miR-122
other, RNA-seq of coding RNA
Homo sapiens
59
06/01/2015
-
-
7
-
Hepatitis C virus functionally sequesters miR-122 [miR-122 KO vs Control CLIP]
other
Homo sapiens
7
06/01/2015
-
ENA
-
-
Hepatitis C virus functionally sequesters miR-122 [m15 vs Mock CLIP]
other
Homo sapiens
8
06/01/2015
-
ENA
1
-
Hepatitis C virus functionally sequesters miR-122 [RNA-Seq]
RNA-seq of coding RNA
Homo sapiens
8
06/01/2015
-
ENA
15
-
Hepatitis C virus functionally sequesters miR-122 [LNAs vs Mock CLIP]
other
Homo sapiens
19
06/01/2015
-
ENA
4
-
Hepatitis C virus functionally sequesters miR-122 [HCV vs Mock CLIP]
other
Homo sapiens
17
06/01/2015
-
ENA
5
-
Genome-wide identification of Bacillus subtilis Zur-binding sites.
ChIP-chip by tiling array
Bacillus subtilis subsp. subtilis str. 168
2
06/01/2015
8
-
EMT Alters Interstitial Fluid Flow-induced Signaling in ERBB2-positive Breast Cancer
transcription profiling by array
Homo sapiens
12
06/01/2015
-
24
-
Effect of FTO (fat mass and obesity-associated) overexpression on gene expression profiling in beta cells
transcription profiling by array
Mus musculus
2
06/01/2015
13
-
Gene expression following treatment with HDAC6 inhibitor C1A
transcription profiling by array
Homo sapiens
12
06/01/2015
-
13
-
A Cell-based Systems Biology Assessment of Human Blood to Monitor Immune Responses After Influenza Vaccination
RNA-seq of coding RNA
Homo sapiens
56
06/01/2015
-
ENA
61
-
Transcriptome analyses of the Corynebacterium glutamicum strains adapted to supraoptimal growth temperatures
transcription profiling by array
Corynebacterium glutamicum
16
06/01/2015
-
-
Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals
RNA-seq of coding RNA
Caenorhabditis elegans
12
06/01/2015
-
-
13
-
Long Non-coding RNAs Control Hematopoietic Stem Cell (HSC) Function
ChIP-seq, RNA-seq of coding RNA
Mus musculus
8
06/01/2015
-
8
-
Microarray analysis in wild type and hy5 plants
transcription profiling by array
Arabidopsis thaliana
6
06/01/2015
6
-
ATAC-seq data in mouse and zebrafish limbs
other
Danio rerio, Mus musculus
3
06/01/2015
-
6
-
Chromatin structure dynamics of hoxa13a, hoxa13b and hoxd13a loci during zebrafish development.
other
Danio rerio
9
06/01/2015
-
2
-
BAC aCGH profiling of 64 GBM (primary & recurrent)
comparative genomic hybridization by array
Homo sapiens
64
06/01/2015
-
30
-
Next generation sequencing of human immune cell subsets across diseases
RNA-seq of coding RNA
Homo sapiens
134
06/01/2015
-
-
139
-
Genome-wide DNA methylation profiling of 68 GBM (primary & recurrent), 4 glioma spheres and 5 non-tumor brain samples
methylation profiling by array
Homo sapiens
77
06/01/2015
35
-
Distinct gene signatures define pathogen- versus diet-induced atherosclerosis development
transcription profiling by array
Mus musculus
21
06/01/2015
20
-
Transcription profiling by array of liver tissues from wild type and Rev-erb{alpha} knockout (Nr1d1-/-) mice to study direct targets of Nr1d1 in rhythmic (circadian) transcription
transcription profiling by array
Mus musculus
10
06/01/2015
4
-
Genomic landscape of Epstein-Barr virus nuclear antigen 3A
ChIP-seq
Homo sapiens
2
06/01/2015
-
5
-
Oxymetholone therapy of Fanconi anemia suppresses osteopontin transcription and induces hematopoietic stem cell cycling
RNA-seq of coding RNA
Mus musculus
20
06/01/2015
-
-
27
-
IL-2Rβ- and CD103-dependent genes in regulatory T cells in the gut mucosa
transcription profiling by array
Mus musculus
9
06/01/2015
6
-
MethylC-Seq of ago6-2, ago4-6 and ago4-6 ago6-2 double mutants
methylation profiling by high throughput sequencing
Arabidopsis thaliana
3
06/01/2015
ENA
2
-
Field of Cancerization in Peripheral Airway Epithelium
transcription profiling by RT-PCR, transcription profiling by array
Homo sapiens
60
06/01/2015
21
-
Field of Cancerization in Peripheral Airway Epithelium: miRNA
transcription profiling by RT-PCR
Homo sapiens
30
06/01/2015
-
-
20
-
Field of Cancerization in Peripheral Airway Epithelium: Gene Expresssion
transcription profiling by array
Homo sapiens
30
06/01/2015
19
-
p53 prevents neurodegeneration by regulating synaptic genes
ChIP-chip by tiling array
Drosophila melanogaster
4
06/01/2015
47
-
HMGB1 contributes to mitochondrial DNA damage repair and extends lifespan in mutant ataxin-1 knock-in mice
transcription profiling by array
Mus musculus
9
05/01/2015
-
17
-
Intestinal epithelial gene expression - TRE-MSI2
transcription profiling by array
Mus musculus
6
05/01/2015
2
-
AtNIGT1/HRS1 TARGET approach
transcription profiling by array
Arabidopsis thaliana
6
05/01/2015
14
-
Transcription profiling by array of cardic ventricle tissues from mice with cardiac-specific constitutive expression of an activated Akt (caAkt) and wild-type controls to test whether Akt activation contributes to mitochondrial dysfunction in pathological cardiac hypertrophy
transcription profiling by array
Mus musculus
6
05/01/2015
9
-
Causal signals between codon bias, mRNA structure and the efficiency of translation and elongation
other, RNA-seq of coding RNA
Saccharomyces cerevisiae
10
05/01/2015
-
-
1
-
Regulatory T cells require the phosphatase PTEN to restrain type 1 and follicular helper T-cell responses
transcription profiling by array
Mus musculus
6
05/01/2015
6
-
Genome-wide analysis of the TEC-specific Hipk2 gene knockout in mouse medullary thymic epithelial cells (mTECs)
transcription profiling by array
Mus musculus
8
05/01/2015
7
-
Identification of sexually dimorphically expressed genes in rat tissues
transcription profiling by array
Rattus norvegicus
256
05/01/2015
29
-
Stably-paused genes revealed through inhibition of transcription initiation by the TFIIH inhibitor Triptolide
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
23
05/01/2015
-
17
-
Hybrid dysfunction and physiological compensation in gene expression
RNA-seq of coding RNA
Tigriopus californicus
9
05/01/2015
-
10
-
Whole genome tomato transcriptional response to Tetranychus urticae herbivory
transcription profiling by array
Solanum lycopersicum
33
05/01/2015
8
-
Whole genome tomato transcriptional response to jasmonic acid treatment and Tetranychus urticae herbivory [def-1]
transcription profiling by array
Solanum lycopersicum
12
05/01/2015
1
-
Whole genome tomato transcriptional response to Tetranychus urticae herbivory [Heinz1706]
transcription profiling by array
Solanum lycopersicum
21
05/01/2015
3
-
Increased Human like Alzheimer features in a Novel Mouse Model with Oxidative DNA Repair Dysfunction
transcription profiling by array
Mus musculus
19
05/01/2015
-
12
-
Effect of Glucocorticoids on microRNA, lncRNA and mRNA Expression Profile of the Human Bone Microcirculatory Endothelial Cells
transcription profiling by array
Homo sapiens
24
05/01/2015
15
-
Genome wide mapping of NFAT1 binding sites in dendritic cells and of chromatin state in steady and dectin-1 activated dendritic cell line D1
ChIP-seq
Mus musculus
8
05/01/2015
-
9
-
The placental gene PEG10 promotes progression of neuroendocrine prostate cancer
transcription profiling by array, comparative genomic hybridization by array
Homo sapiens
20
05/01/2015
14
-
The placental gene PEG10 promotes progression of neuroendocrine prostate cancer [aCGH]
comparative genomic hybridization by array
Homo sapiens
6
05/01/2015
18
-
The placental gene PEG10 promotes progression of neuroendocrine prostate cancer [Expression]
transcription profiling by array
Homo sapiens
14
05/01/2015
20
-
Gene expression signatures of human plasma cells isolated from different territories
transcription profiling by array
Homo sapiens
20
05/01/2015
19
-
Brassica napus control vs. heat stress
transcription profiling by array
Brassica napus
4
05/01/2015
3
-
Comparison of gene expression of WT and PerM mutant M. tuberculosis H37Rv grown in high and reduced magnesium
transcription profiling by array
Mycobacterium tuberculosis
12
05/01/2015
11
-
Co-chaperone CCRP/DNAJC7-regulated gene regulation in the mouse liver
transcription profiling by array
Mus musculus
18
05/01/2015
8
-
Comparative genomics of Staphylococcus aureus and the application of a “pan-genome” for assigning RNA-Seq transcript reads from divergent strains and in vivo human nasal samples
RNA-seq of coding RNA
Staphylococcus aureus
7
05/01/2015
-
ENA
3
-
The hypoxia marker pimonidazole reflects a transcriptional program associated with aggressive prostate cancer.
transcription profiling by array
Homo sapiens
54
05/01/2015
-
21
-
miRNA expression data from MCF-7 cells, overexpressing ANXA1
transcription profiling by array
Homo sapiens
6
05/01/2015
16
-
H2A.Z marks antisense promoters and has positive effects on antisense transcript levels in budding yeast
ChIP-seq, RNA-seq of coding RNA
Saccharomyces cerevisiae
14
05/01/2015
ENA
2
-
Microarray analysis of chimeric CD4+CD28null and CD4+CD28+ T-cells in humanized mice.
transcription profiling by array
Homo sapiens
6
05/01/2015
11
-
Transcriptional signature of unipotent luminal progenitors of the mouse mammary gland
transcription profiling by array
Mus musculus
6
04/01/2015
44
-
Differential gene expression in Lrig1null duodenal tumors compared to normal duodenum
transcription profiling by array
Mus musculus
14
04/01/2015
10
-
Translatome analyses of opposing tissue-specific brassinosteroid signals orchestrating root meristem differentiation
RNA-seq of coding RNA
Arabidopsis thaliana
48
04/01/2015
-
ENA
11
-
InVERT molding for scalable control of tissue micro-architecture
transcription profiling by array
Homo sapiens
5
04/01/2015
13
-
Single cell derived clonal analysis of human glioblastoma links functional and genomic heterogeneity
genotyping by array
Homo sapiens
46
03/01/2015
-
46
-
Single cell derived clonal analysis of human glioblastoma links functional and genomic heterogeneity
transcription profiling by array
Homo sapiens
34
03/01/2015
-
40
-
Pseudogene INTS6P1 regulates its cognate gene INTS6 through competitive binding of miR-17-5p in hepatocellular carcinoma
transcription profiling by array
Homo sapiens
12
03/01/2015
12
-
Pseudogene INTS6P1 regulates its cognate gene INTS6 through competitive binding of miR-17-5p in hepatocellular carcinoma [miRNA]
transcription profiling by array
Homo sapiens
6
03/01/2015
17
-
Pseudogene INTS6P1 regulates its cognate gene INTS6 through competitive binding of miR-17-5p in hepatocellular carcinoma [mRNA, lncRNA]
transcription profiling by array
Homo sapiens
6
03/01/2015
15
-
siRNA knockdown of GALNT1 in hepatocellular carcinoma HA22T and PLC5 cells
transcription profiling by array
Homo sapiens
12
03/01/2015
12
-
Global Microarray Analysis of Bacillus sp. N16-5 Salt Stress Adaptation
transcription profiling by array
Bacillus sp. N16-5
27
03/01/2015
3
-
Promoter hypermethylation of TERT is associated with hepatocellular carcinoma in the Han Chinese population
RNA-seq of coding RNA
Homo sapiens
24
03/01/2015
-
-
16
-
Essential role of IRF4 and MYC signaling for survival of anaplastic large cell lymphoma survival
transcription profiling by array
Homo sapiens
24
03/01/2015
13
-
Identifying interferon-stimulated genes enriched in multiple tissues of Irgm1-/- mice
transcription profiling by array
Mus musculus
20
03/01/2015
5
-
Genomic aberrations of high-grade and low-grade gliomas from Chinese patients
genotyping by array, comparative genomic hybridization by array
Homo sapiens
36
03/01/2015
-
27
-
Transcription analysis of the sensor kinase PA4398 in Pseudomonas aeruginosa PA14 under swarming conditions.
transcription profiling by array
Pseudomonas aeruginosa
4
02/01/2015
21
-
Gene expression and complex network analyis of effects of anaethesia
transcription profiling by array
Rattus norvegicus
20
02/01/2015
14
-
Differential gene transcript expression profiles among human monocyte-derived dendritic cells infected with Leishmania major Friedlin V1 strain and Leishmania donovani 1S strain parasites at early infection time points
transcription profiling by array
Homo sapiens
35
02/01/2015
3
-
ATRX tolerates activity-dependent histone H3 “methyl/phos switching” to maintain repetitive element silencing in neurons
ChIP-seq
Mus musculus
10
02/01/2015
-
ENA
3
-
Spatial genome organization: contrasting views from chromosome conformation capture and fluorescence in situ hybridization
other
Mus musculus
18
02/01/2015
-
1
-
Effect of long-term vitamin D supplementation on colonic gene expression in IL-10 Knockout mice at young adulthood
transcription profiling by array
Mus musculus
24
02/01/2015
-
11
-
Time course IAA treatment Arabidopsis seedlings
transcription profiling by array
Arabidopsis thaliana
12
02/01/2015
7
-
Expression data from SDH-disabled GIST
transcription profiling by array
Homo sapiens
20
02/01/2015
20
-
Next generation sequencing of Phaeodactylum tricornutum grown with and without nitrogen
RNA-seq of coding RNA
Phaeodactylum tricornutum
6
02/01/2015
-
ENA
5
-
Mapping of Hepatic Expression Quantitative Trait Loci (eQTLs) in a Han Chinese Population
transcription profiling by array, comparative genomic hybridization by array
Homo sapiens
128
02/01/2015
14
-
Mapping of Hepatic Expression Quantitative Trait Loci (eQTLs) in a Han Chinese Population [Expression analysis]
transcription profiling by array
Homo sapiens
64
02/01/2015
36
-
Mapping of Hepatic Expression Quantitative Trait Loci (eQTLs) in a Han Chinese Population [SNP analysis]
comparative genomic hybridization by array
Homo sapiens
64
02/01/2015
4
-
Xanthomonas oryzae pv. oryzicola (Indian Isolate) wild type and complented strains vs rpfF mutant grown under iron starved condition
transcription profiling by array
Xanthomonas oryzae pv. oryzicola
8
02/01/2015
4
-
Identification of differentially expressed genes against WSSV infection in Penaeus monodon by microarray
transcription profiling by array
Penaeus monodon
16
02/01/2015
8
-
ChIP-sequencing of Human FOXN2 and RFX1 in HEK293T Cells
ChIP-seq
Homo sapiens
4
01/01/2015
-
ENA
24
-
Ribosome Profiling of Mycobacterium smegmatis
RNA-seq of coding RNA
Mycobacterium smegmatis str. MC2 155
4
01/01/2015
-
ENA
29
-
Transcription profiling by array of neonatal and adult rat ventricular cardiomyocytes
transcription profiling by array
Rattus norvegicus
12
01/01/2015
-
27
-
Activin regulates H3K4me3 in hPSC
transcription profiling by array
Homo sapiens
30
01/01/2015
44
-
breast cancer cell lines ALDH+/-
methylation profiling by array
Homo sapiens
22
01/01/2015
32
-
Transcription profiling by array of human HEK-293 cells during exposure and internalisation of peptide aggregates of different sizes
transcription profiling by array
Homo sapiens
21
01/01/2015
36
-
Transcription profiling by array of 82 non-muscle invasive (superficial) bladder carcinoma samples and 4 normal bladder samples as part of the Cartes d’Identite des Tumeurs (CIT) study
transcription profiling by array
Homo sapiens
86
01/01/2015
-
95
-
Insulin-like growth factor-binding protein 2 Induces Epithelial-mesenchymal Transition via Activation of NF-κB Pathway in Pancreatic Ductal Adenocarcinoma
transcription profiling by array
Homo sapiens
1
01/01/2015
41
-
ChIP-Seq of Histone H3K4me1 and H3K4me3 in human GIST48 cells
ChIP-seq
Homo sapiens
2
01/01/2015
-
3
-
RNA-Seq of murine GIST-like tumors after Etv1 ablation
RNA-seq of coding RNA
Mus musculus
8
01/01/2015
-
-
3
-
ADRM1 amplified metastasis gene in gastric cancer
transcription profiling by array
Homo sapiens
16
01/01/2015
23
-
Expression data from AMPK deficient MLL-AF9 leukemia initiating cells and whole leukemia cells
transcription profiling by array
Mus musculus
12
01/01/2015
19
-
WDLPS and DDLPS aCGH case 73
comparative genomic hybridization by array
Homo sapiens
5
01/01/2015
7
-
Comparison of gene expression profiles between the CD110+ tumor initiating cells from primary colorectal tumors and their liver metastases.
transcription profiling by array
Homo sapiens
12
01/01/2015
14
-
IFNγ signaling endows DCs with the capacity to control type I inflammation during parasitic infection through promoting T-bet+ regulatory T cells
transcription profiling by array
Mus musculus
12
01/01/2015
5
-
Identification of host microRNAs potentially related to SGIV infection in grouper Epinephelus coioides
RNA-seq of non coding RNA
Epinephelus coioides
1
01/01/2015
-
-
-
Gene expression profiling in proximal versus distal mouse colon
transcription profiling by array
Mus musculus
6
01/01/2015
4
-
Gene transcription profiling in wild and laboratory-exposed eels reveals common responses to low temperature and chronic pollution exposure
transcription profiling by array
Anguilla anguilla, Anguilla rostrata
84
01/01/2015
-
5
-
LNCaP and C4-2 prostate cancer cells treated with taxanes
transcription profiling by array
Homo sapiens
24
01/01/2015
12
-
Expression data from C4-2 prostate cancer cells treated with taxanes
transcription profiling by array
Homo sapiens
12
01/01/2015
11
-
Expression data from LNCaP prostate cancer cells treated with taxanes
transcription profiling by array
Homo sapiens
12
01/01/2015
5
-
Genetic and Molecular Characterization of Submergence Response Identifies Subtol6 as a Major Submergence Tolerance Locus in Maize
RNA-seq of coding RNA
Zea mays
36
01/01/2015
-
4
-
Sequencing of First-strand cDNA Library Reveals Full-length Transcriptomes
RNA-seq of coding RNA, RNA-seq of non coding RNA
Mus musculus
32
01/01/2015
-
-
7
-
LPS induced Cytokines & Chemokines changes in E9.5 pregnant mouse uteri
transcription profiling by RT-PCR
Mus musculus
9
01/01/2015
-
2
-
High throughput analysis of three human adipose cell lines PAZ6, SGBS and SW872
RNA-seq of coding RNA
Homo sapiens
7
01/01/2015
-
-
-
An integrated transcriptome and expressed variant analysis of sepsis survival and death
RNA-seq of coding RNA
Homo sapiens
129
01/01/2015
-
-
4
-
Oxidative stress management in Dinoroseobacter shibae: Role of extrachromosomal elements and the importance of a small chromid during starvation
transcription profiling by array
Dinoroseobacter shibae DFL 12 = DSM 16493
3
01/01/2015
-
-
Intrinsic Protection From Leukemic Transformation at The Level of Hematopoietic Stem Cells
RNA-seq of coding RNA
Mus musculus
12
01/01/2015
-
2
-
Genome-wide identification of microRNAs and their targets involved in the phyB-mediated light signaling pathway in rice
RNA-seq of non coding RNA
Oryza sativa
4
01/01/2015
-
-
1
-
Anti-microRNA-21 prevents kidney failure in Alport syndrome by stimulating metabolic pathways
RNA-seq of coding RNA
Mus musculus
20
01/01/2015
-
15
-
mRNA profiling of Col4a3-Knockout Alport Syndrome mouse model treated with inhibitor of miR-21 at 5.5 weeks of age
RNA-seq of coding RNA
Mus musculus
11
01/01/2015
-
23
-
mRNA profiling of Col4a3-Knockout Alport Syndrome mouse model treated with inhibitor of miR-21 at 9 weeks of age
RNA-seq of coding RNA
Mus musculus
9
01/01/2015
-
25
-
S100 calcium-binding proteins A8/A9 initiate the early inflammatory program in injured peripheral nerve
transcription profiling by array
Rattus norvegicus
8
01/01/2015
2
-
Genome-wide analysis of microRNAs and their targets involving in leaf senescence of rice
RNA-seq of coding RNA, RNA-seq of non coding RNA
Oryza sativa
14
01/01/2015
-
-
-
-
Gene expression in RNP autoantibody+ systemic lupus erythematosus (SLE) patient blood
transcription profiling by array
Homo sapiens
129
01/01/2015
30
-
Mst1/2-Yap in lung epithelial progenitor cells
transcription profiling by array, RNA-seq of coding RNA
Homo sapiens, Mus musculus
14
01/01/2015
15
-
RNA-seq analysis of Mst1/2 deleted bronchiolar epithelial cells from adult mouse lungs
RNA-seq of coding RNA
Mus musculus
2
01/01/2015
-
1
-
RNA-seq analysis of bronchosphere cultures of primary human bronchiolar epithelial cells
RNA-seq of coding RNA
Homo sapiens
4
01/01/2015
-
3
-
Microarray of Mst1/2 deleted epithelial cells from E18.5 mouse lungs
transcription profiling by array
Mus musculus
8
01/01/2015
6
-
Gene expression data of human dermal pilla cells, human induced pluripotent stem cell-derived CD271+CD90+ mesenchymal stem cells before and after the induction toward dermal papilla cells
transcription profiling by array
Homo sapiens
6
01/01/2015
-
-
SMYD2 specificly regulate BIX-01294 induced TP53 target genes revealed by RNA-Seq
RNA-seq of coding RNA
Homo sapiens
6
01/01/2015
-
-
-
RNA-Seq analysis of mouse small intestine enteroendocrine cells
RNA-seq of coding RNA
Mus musculus
3
01/01/2015
-
2
-
Genome-wide analysis of day 31 hESC-cardiomyocytes treated with DMSO (control) or retinoic acid (RA) during differentiation
transcription profiling by array
Homo sapiens
16
01/01/2015
-
-
-
The severity of 11p15 ICR1 hypomethylation in clonally derived skin fibroblasts from children with Silver-Russell syndrome is not predictive of the in-vitro phenotype
transcription profiling by array
Homo sapiens
16
01/01/2015
5
-
NOTCH and WNT pathways regulate stemness and differentiation in human fallopian tube long term organoid culture
transcription profiling by array
Homo sapiens
2
01/01/2015
13
-
Aspergillus nidulans strains TNO2A3, ∆msbA and ∆MHD grown in complete media (YUU) and on avicel as sole carbon source
transcription profiling by array
Aspergillus nidulans
12
01/01/2015
1
-
KLF1 null neonates display hydrops fetalis and a deranged erythroid transcriptome
RNA-seq of coding RNA, unknown experiment type
Homo sapiens
3
01/01/2015
-
-
5
-
Gene expression profiling of 18 hepatocellular carcinoma and adjacent non-tumorous liver tissue
transcription profiling by array
Homo sapiens
36
01/01/2015
56
-
Whole genome miRNA expression profiling using HeLa cells in response to Heat shock stress.
transcription profiling by array
Homo sapiens
6
01/01/2015
5
-
Effect of Glucocorticoids on lncRNA and mRNA Expression Profile of the Human Bone Microcirculatory Endothelial Cells
transcription profiling by array
Homo sapiens
8
01/01/2015
12
-
Quantitative omics reveals that type I and II IFNs alter bacterial vacuole compositions to restrict infection in macrophages and lungs
transcription profiling by array
Mus musculus
20
01/01/2015
2
-
Transgenerational antiviral RNAi does not occur in Orsay virus infection of C. elegans
RNA-seq of non coding RNA
Caenorhabditis elegans
16
01/01/2015
-
3
-
Prediction of clinical reactivity in food sensitized individuals from blood DNA methylation profiles
methylation profiling by array
Homo sapiens
71
01/01/2015
-
1
-
Effects of miR-125b expression on the transcriptome of B cell precursors
transcription profiling by array
Mus musculus
8
01/01/2015
-
-
Genomic and epigenomic architectures of monozygotic twins discordant for child acute lymphoblastic leukemia
methylation profiling by high throughput sequencing
Homo sapiens
10
01/01/2015
-
8
-
Expression data from mouse embryonic stem cells across a time course of Erk stimulation
transcription profiling by array
Mus musculus
16
01/01/2015
15
-
CRTC1 overexpression in Caco-2 colon cancer cells
transcription profiling by array
Homo sapiens
8
01/01/2015
8
-
20% (w/v) Glucose osmotic stress (YP20) vs 1M Sorbitol osmotic stress (YPS)
transcription profiling by array
Saccharomyces cerevisiae
4
01/01/2015
7
-
A comparison of control samples for ChIP-seq of histone modifications
ChIP-seq, RNA-seq of coding RNA
Mus musculus
9
01/01/2015
-
-
1
-
ChIP-seq and RNA-seq analysis of PRC2 core subunits in primary human erythroid progenitor cells
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
30
01/01/2015
-
16
-
RNA-seq transcriptional profiling in primary human erythroid progenitor cells upon shRNA-mediated knockdown of PRC2 core subunits
RNA-seq of coding RNA
Homo sapiens
15
01/01/2015
-
10
-
ChIP-seq analysis of PRC2 core subunits in primary human erythroid progenitor cells
ChIP-seq
Homo sapiens
15
01/01/2015
-
8
-
Methylation disorder in CLL
methylation profiling by high throughput sequencing
Homo sapiens
149
01/01/2015
-
2
-
Extensive remodeling of DC function by rapid maturation-induced epigenetic gene silencing
ChIP-seq
Homo sapiens
4
01/01/2015
-
1
-
MiRNA profiling in Rattus norvegicus pancreatic cells
transcription profiling by array
Rattus norvegicus
8
01/01/2015
5
-
MiRNA profiling in Rattus norvegicus pancreatic cells: INS-1E cells during infection with Coxsackie B4 virus
transcription profiling by array
Rattus norvegicus
4
01/01/2015
5
-
MiRNA profiling in Rattus norvegicus pancreatic cells: RIN-5F cells during infection with Coxsackie B4 virus
transcription profiling by array
Rattus norvegicus
4
01/01/2015
5
-
Expression profiling of proliferative T-HEp3 and dormant D-HEp3 HNSCC cells in vivo
transcription profiling by array
Homo sapiens
6
01/01/2015
-
20
-
Comparative FAIRE-seq analysis reveals distinguishing features of the chromatin structure of ground state- and primed pluripotent cells
ChIP-seq
Mus musculus
10
01/01/2015
-
10
-
Suppression of NCALD protects against spinal muscular atrophy by restoring impaired endocytosis
transcription profiling by array
Homo sapiens
12
01/01/2015
-
3
-
Transcriptional changes in Manila clam (Ruditapes philippinarum) in response to brown ring disease
transcription profiling by array
Ruditapes philippinarum
36
01/01/2015
4
-
Time- and phase-dependent expression profile of miRNA and mRNA in human microglial cells (CHME3) infected with Japanese encephalitis virus (JEV) P20778 strain
transcription profiling by array
Homo sapiens
30
01/01/2015
9
-
Genotoxicity after adeno-associated virus (AAV) gene therapy is dependent upon dose, treatment age and enhancer-promoter selection
transcription profiling by array
Mus musculus
58
01/01/2015
20
-
miRNA expression profile in HOS cells exposed to sodium fluoride
transcription profiling by array
Homo sapiens
6
01/01/2015
15
-
Expression data from roots and first two leaves of tomato seedlings growing on regular MS medium or MS medium supplemented with multi-wall carbon nanohorns (25 ug/ml)
transcription profiling by array
Solanum lycopersicum
12
01/01/2015
11
-
Changes in Gene Expression Profile in two Multidrug Resistant Cell Lines derived from a same Drug Sensitive Cell line
transcription profiling by array
Homo sapiens
10
01/01/2015
42
-
MicroRNA expression profile in CHME3 cells infected with Japanese encephalitis virus
transcription profiling by array
Homo sapiens
18
01/01/2015
13
-
RNA-Seq Identifies Novel Myocardial Gene Expression Signatures of Heart Failure [microarray]
transcription profiling by array
Homo sapiens
313
01/01/2015
12
-
mRNA expression profile in CHME3 cells infected with Japanese encephalitis virus
transcription profiling by array
Homo sapiens
12
01/01/2015
2
-
An angiogenic role for the aryl hydrocarbon receptor in choroidal neovascularization
RNA-seq of coding RNA
Mus musculus
2
01/01/2015
-
-
9
-
Expression profiling of B.subtils ftsZ depletion cells with ftsZ induced or uninduced for 1 or 2hrs.
transcription profiling by array
Bacillus subtilis
14
01/01/2015
-
-
Astrocyte transcriptome from Mecp2-deficient mice
transcription profiling by array
Mus musculus
8
01/01/2015
9
-
Scl specifies hemogenic endothelium and inhibits cardiogenesis via primed enhancers [RRBS]
methylation profiling by high throughput sequencing
Mus musculus
4
01/01/2015
-
2
-
Suppression of BRCA1 sensitizes to proteasome inhibitors in DNA repair-independent manner.
transcription profiling by array
Homo sapiens
6
01/01/2015
23
-
The effect on gene expression by shRNA-58335
transcription profiling by array
Homo sapiens
4
01/01/2015
27
-
Comparative analysis of chrysanthemum transcriptome in response to infection of three viruses: Cucumber mosaic virus, Tomato spotted wilt virus, and Potato virus X
transcription profiling by tiling array
Chrysanthemum
12
01/01/2015
-
-
Deregulated Myc Requires MondoA for Metabolic Reprogramming and Tumorigenesis
transcription profiling by array
Homo sapiens
12
01/01/2015
-
3
-
Transcriptome analysis of Corynebacterium glutamicum in response to furfural presence
transcription profiling by array
Corynebacterium glutamicum ATCC 13032
6
01/01/2015
3
-
miR-302-367 regulates cardiomycyte proliferation and differentiation during development
transcription profiling by array
Mus musculus
6
01/01/2015
6
-
Gene expression analysis of Candida albicans hyphae in interaction with PK E6/E7 vaginal epithelial cell line
RNA-seq of coding RNA
Candida albicans
3
01/01/2015
-
-
-
-
DNA methylation variation in Arabidopsis has a genetic basis and appears to be involved in local adaptation
RNA-seq of coding RNA
Arabidopsis thaliana
323
01/01/2015
-
20
-
Whole-blood transcriptomic profiling highlights rituximab response in rheumatoid arthritis
transcription profiling by array
Homo sapiens
138
01/01/2015
42
-
Seedling transcriptomes of Arabidopsis thaliana HULK mutants
RNA-seq of coding RNA
Arabidopsis thaliana
8
01/01/2015
-
1
-
Transcription profiling by array of flag leaves from japonica rice (cultivar Zhonghua11) with OsSLAC7 T-DNA insertion mutation against wild type controls
transcription profiling by array
Oryza sativa
6
01/01/2015
13
-
The TIMP3/Apelin axis Regulates Atherosclerosis and Heart Metabolism leading to increased mortality in ApoE null Mice
RNA-seq of coding RNA
Mus musculus
6
01/01/2015
-
17
-
Expression data from polarized macrophages: effect of p53
transcription profiling by array
Mus musculus
15
01/01/2015
27
-
Functional analysis of the cytoprotective transcription factor Nrf2 in keratinocytes: Identification of Nrf2-regulated miRNAs
transcription profiling by array
Mus musculus
12
01/01/2015
2
-
Regulation of cold-inducible gene expression by RCI1A
transcription profiling by array
Arabidopsis, Arabidopsis thaliana
6
01/01/2015
-
4
-
Expression data from wild type (WT) and TREM2 null alveolar macrophages (AM)
transcription profiling by array
Mus musculus
4
01/01/2015
4
-
The effect of MEK inhibition on transcription in melanoma [Batch 1]
transcription profiling by array
Homo sapiens
24
01/01/2015
7
-
Gene expression profiles upon Meis1 knockout in Hoxa9/Meis1-induced AML
transcription profiling by array
Mus musculus
8
01/01/2015
15
-
A systems-level approach to parental genomic imprinting: the imprinted gene network includes extracellular matrix genes and regulates cell cycle exit and differentiation
RNA-seq of coding RNA
Mus musculus
8
01/01/2015
-
-
1
-
The Calcineurin-NFAT-Angiopoietin 2 signaling axis in lung endothelium is critical for the establishment of lung metastases
transcription profiling by array
Homo sapiens, Mus musculus
16
01/01/2015
11
-
Gene expression changes induced by overexpression of MN1 and MN1VP16 in murine bone marrow cells
transcription profiling by array
Mus musculus
6
01/01/2015
15
-
Gene expression of hepatocyte cell line (HepG2) treated with H2O2 to induce senescence relative to control untreated cells
transcription profiling by array
Homo sapiens
8
01/01/2015
22
-
Scl specifies hemogenic endothelium and inhibits cardiogenesis via primed enhancers
ChIP-seq, transcription profiling by array, methylation profiling by high throughput sequencing, RNA-seq of coding RNA
, Mus musculus
47
01/01/2015
18
-
Scl specifies hemogenic endothelium and inhibits cardiogenesis via primed enhancers [expression]
transcription profiling by array
Mus musculus
6
01/01/2015
7
-
Scl specifies hemogenic endothelium and inhibits cardiogenesis via primed enhancers [RNA-seq]
RNA-seq of coding RNA
Mus musculus
3
01/01/2015
-
22
-
Scl specifies hemogenic endothelium and inhibits cardiogenesis via primed enhancers [ChIP-seq]
ChIP-seq
Mus musculus
34
01/01/2015
-
12
-
Gene expression changes induced by expression of MN1 deletion mutants in murine bone marrow cells
transcription profiling by array
Mus musculus
8
01/01/2015
6
-
NA-Seq reveals dynamic changes of gene expression in key stages of intestine regeneration in the sea cucumber Apostichopus japonicus.
RNA-seq of coding RNA
Apostichopus japonicus
5
01/01/2015
-
2
-
Transcriptome analysis of human sinusoidal endothelial cells, hepatocyte
RNA-seq of coding RNA
Homo sapiens
3
01/01/2015
-
2
-
Redefinition of Human Androgen Responsive Elements [MNase-Seq, ChIP_seq]
ChIP-seq
Homo sapiens
14
01/01/2015
-
32
-
Redefinition of Human Androgen Responsive Elements [FOX_ChIP_exo]
ChIP-seq
Homo sapiens
2
01/01/2015
-
31
-