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AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
Comparison of global gene expression profiles of microdissected human foetal Leydig cells with their normal and hyperplastic adult equivalents
transcription profiling by array
Homo sapiens
12
18/04/2017
-
139
-
Expression data from young and senescent HCAECs treated with proton pump inhibitors (omeprazole and lansoprazole)
transcription profiling by array
Homo sapiens
18
18/04/2017
64
-
Comparative study of host response to chytridiomycosis in susceptible and resistant toad species
transcription profiling by array
Anaxyrus boreas, Rhinella marina
71
18/04/2017
50
-
Lamin A/C Is Required For ChAT-Dependent Neuroblastoma Differentiation: a microarray gene expression study
transcription profiling by array
Mus musculus
8
18/04/2017
50
-
Targeting MDM4/MDM2 binding interface for reactivation of p53 in cancer therapy
transcription profiling by array
Homo sapiens
24
18/04/2017
98
-
ChIP-seq of H1299 cells stably transfected with empty vector or the p53 mutant R273H
ChIP-seq
Homo sapiens
8
16/04/2017
-
ENA
195
-
RNA-seq of H1299 cells stably transfected with empty vector or the p53 mutant R273H
RNA-seq of coding RNA
Homo sapiens
4
16/04/2017
-
ENA
155
-
Affymetrix whole transcriptome gene expression analysis of ER-stressed Jurkat cells
transcription profiling by array
Homo sapiens
4
15/04/2017
119
-
RNA-seq of Streptococcus anginosus in a mono- and multispecies biofilm
RNA-seq of coding RNA
Streptococcus anginosus
6
14/04/2017
-
ENA
122
-
Microarray and transcript expression analysis of P. aeruginosa grown with or without bacterial (Delftia tsuruhatensis SJ01) extracts
transcription profiling by array
Pseudomonas aeruginosa PAO1
2
12/04/2017
-
69
-
Profiling Period 2 (PER2) mediated pathways following ischemic preconditioning (IPC) of the mouse heart using a genome array with 352 abundantly expressed and well-characterized micro RNAs
transcription profiling by RT-PCR
Mus musculus
3
12/04/2017
-
124
-
Time course Pho/dSfmbt Chromatin Immunoprecipitation on Drosophila melanogaster embryos during embryogenesis
ChIP-seq
Drosophila melanogaster
8
11/04/2017
-
ENA
158
-
Expression level of an industrial yeast strain producing isobutanol and wild-type
transcription profiling by array
Saccharomyces cerevisiae
6
10/04/2017
69
-
Use of clinical chromosomal microarray in Chinese patients with autism spectrum disorder - implications of a copy number variation involving dpp10 (Perkin Elmer CGX)
comparative genomic hybridization by array
Homo sapiens
1
07/04/2017
-
79
-
Use of clinical chromosomal microarray in Chinese patients with autism spectrum disorder - implications of a copy number variation involving dpp10 (CGX-12)
comparative genomic hybridization by array
Homo sapiens
9
07/04/2017
-
72
-
Transcriptomic profiling of chicken lung epithelial cells during low pathogenic avian influenza infection
transcription profiling by array
Gallus gallus
4
07/04/2017
-
180
-
Transcription profiling by array of wild-type and NCED3 mutant Arabidopsis plants under dehydration stress
transcription profiling by array
Arabidopsis thaliana
32
07/04/2017
-
206
-
In situ Hi-C study of chromatin conformation during early Drosophila development
Hi-C, ChIP-seq
Drosophila melanogaster
45
06/04/2017
ENA
617
-
Gene expression analysis of PDX1+ sub populations hESC-derived pancreatic endoderm cells and posterior foregut endoderm
transcription profiling by array
Homo sapiens
12
05/04/2017
-
199
-
Transcriptional profiling of antiestrogen-sensitive and -resistant MCF-7 cells
transcription profiling by array
Homo sapiens
20
05/04/2017
205
-
Changes in gene expression during G-CSF-induced emergency granulopoiesis in humans
transcription profiling by array
Homo sapiens
15
04/04/2017
-
268
-
Gene expression profiles of control versus Prdm16-overexpressing cells
transcription profiling by array
Mus musculus
2
03/04/2017
-
154
-
Digital Karyotyping for Detecting Chromosome Alterations
genotyping by array
Homo sapiens
12
03/04/2017
184
-
Transcription profiling by high throughput sequencing of Zika virus-infected human brain organoids
RNA-seq of coding RNA
Homo sapiens
6
03/04/2017
-
ENA
300
-
Transcription profiling by array of mouse embryonic jejunum explants treated with TGF-B1
transcription profiling by array
Mus musculus
12
03/04/2017
150
-
Transcription profiling by array of Magnaporthe oryzae wild type and Tpc1 mutant strains
transcription profiling by array
Magnaporthe oryzae 70-15
4
03/04/2017
150
-
Transcriptional responses in bovine skin during blood feeding of the cattle tick, Rhipicephalus microplus
transcription profiling by array
Bos indicus, Bos taurus
26
02/04/2017
-
139
-
Transcription profiling by array of human hematopoietic stem cells isolated from type 1 diabetes patients and healthy controls
transcription profiling by array
Homo sapiens
8
02/04/2017
-
207
-
Comparative systems toxicology analysis of cigarette smoke and aerosol from a candidate modified risk tobacco product in organotypic human gingival epithelial cultures: a 3-day repeated exposure study (miRNA data)
microRNA profiling by array
Homo sapiens
81
01/04/2017
147
-
Comparative systems toxicology analysis of cigarette smoke and aerosol from a candidate modified risk tobacco product in organotypic human gingival epithelial cultures: a 3-day repeated exposure study (mRNA data)
transcription profiling by array
Homo sapiens
81
01/04/2017
163
-
Protective vaccination induces differential miRNA expression in the liver of Balb/c mice during crisis of Plasmodium chabaudi blood-stage malaria
microRNA profiling by array
Mus musculus
30
01/04/2017
-
156
-
Microarray/gene expression analysis of RNA isolated with two different protocols from human blood sampled on PAXgene and Tempus
transcription profiling by array
Homo sapiens
87
01/04/2017
-
141
-
Microarray/gene expression analysis of RNA isolated with two different protocols from human blood sampled on PAXgene and Tempus
transcription profiling by array
Homo sapiens
19
01/04/2017
-
134
-
A transit amplifying population underpins the efficient regenerative capacity of the testis
transcription profiling by array
Mus musculus
8
01/04/2017
-
114
-
Genome-wide mRNA expression status of non-B non-C hepatocellular carcinoma assessed by SurePrint G3 Human GE 8x60K v2 Microarray (Agilent, USA)
transcription profiling by array
Homo sapiens
30
01/04/2017
-
195
-
Genome-wide microRNA expression status of non-B non-C hepatocellular carcinoma assessed by 3D-Gene Human miRNA Oligo Chip (Toray, Japan)
microRNA profiling by array
Homo sapiens
48
01/04/2017
-
162
-
Genome-wide DNA methylation status of non-B non-C hepatocellular carcinoma assessed by Infinium HumanMethylation450 BeadChip Kit (Illumina, USA)
methylation profiling by array
Homo sapiens
86
01/04/2017
-
165
-
The role of insulin resistance in experimental diabetic retinopathy - genetic and molecular aspects
transcription profiling by array
Rattus norvegicus
35
31/03/2017
-
222
-
GENCODE PCR-Seq Batch XVII
RNA-seq of coding RNA, RNA-seq of non coding RNA
Homo sapiens
32
31/03/2017
-
ENA
133
-
Transcriptome analyses of the impact of Hap5 transcription factor in the pathogenic yeast Candida glabrata
transcription profiling by array
Candida glabrata
6
31/03/2017
-
97
-
Transcriptome before and 10 min after valine induced isoleucine starvation in Escherichia coli K12 grown in minimal MOPS glucose medium at 37 C
RNA-seq of coding RNA, RNA-seq of non coding RNA
Escherichia coli K-12
2
31/03/2017
-
ENA
81
-
Brassica nigra challenged by Pieris brassicae, eggs of Pieris brassicae, Xanthomonas campestris pv. raphani, Brevicoryne brassicae or by combined stresses eggs of P. brassicae / P. brassicae, X. campestris / P. brassicae, B. brassicae / P. brassicae
transcription profiling by array
Brassica nigra
38
31/03/2017
-
88
-
Transcription profiling of T cells from healthy controls and patients with seasonal allergic rhinitis before and after one year of sublingual immunotherapy
transcription profiling by array
Homo sapiens
24
31/03/2017
-
104
-
EGR1 ChIP-seq targeted to Npy and its receptors
ChIP-seq
Mus musculus
2
30/03/2017
-
ENA
83
-
Gene expression profiles between mtROShigh and mtROSlow cells dissociated from E14.5 neocortical cells were compared by microarray
transcription profiling by array
Mus musculus
4
30/03/2017
-
63
-
microRNA profiling for prediction of chemoradiation efficacy in locally advanced head and neck squamous cell carcinoma
microRNA profiling by array
Homo sapiens
48
30/03/2017
-
125
-
Single cell RNA-sequencing of Spike-ins and mESC using Smart-Seq2 on C1 System
RNA-seq of coding RNA from single cells
Mus musculus
96
29/03/2017
-
ENA
120
-
Single cell RNA-sequencing of Spike-ins and mESC using Smart-Seq2 on C1 system (Replicate run)
RNA-seq of coding RNA from single cells
Mus musculus
61
29/03/2017
-
ENA
111
-
RNA-seq data from the trachea epithelial cells of two inbred chicken lines at three time points after challenge with lentogenic Newcastle disease virus
RNA-seq of coding RNA
Gallus gallus
48
29/03/2017
-
ENA
101
-
Single cell RNA-sequencing of Spike-ins and mESC using SMARTer on C1 System
RNA-seq of coding RNA from single cells
Mus musculus
96
28/03/2017
-
ENA
110
-
Antibody repertoire RNA-seq throughout key stages of mouse B-cell development (pre-B-cells, naive B cells, plasma cells)
RNA-seq of coding RNA
Mus musculus
71
28/03/2017
-
ENA
278
-
TSLPR expression marks a functionally discrete subset of human monocytes elicited by TLR4 activation
RNA-seq of coding RNA
Homo sapiens
6
28/03/2017
-
ENA
68
-
Genomic atlas of human adrenal and gonad development
transcription profiling by array
Homo sapiens
53
27/03/2017
-
188
-
RNA-seq of porcine peripheral whole blood from pig divergently selected for residual feed intake and treated with lipopolysaccharide
RNA-seq of coding RNA
Sus scrofa
32
24/03/2017
-
ENA
112
-
Comparative analysis of Bruno-3 gain of function in Drosophila larval muscles
comparative genomic hybridization by array
Drosophila melanogaster
3
24/03/2017
-
83
-
Transcription profiling by array of Arabidopsis roots infected with the cyst nematode H. schachtii
transcription profiling by array
Arabidopsis thaliana
6
23/03/2017
-
162
Transcription profiling by array of eight human Klinefelter syndrome patients (47,XXY) and eight human controls
transcription profiling by array
Homo sapiens
16
23/03/2017
-
92
-
Transcripton profiling by array of the cellular subpopulations that compose the hierarchy of normal human mammary epithelial cells
transcription profiling by array
Homo sapiens
20
23/03/2017
-
178
-
Transcription profiling by array of Arabidopsis roots treated with nematode aqueous diffusate (NemaWater)
transcription profiling by array
Arabidopsis thaliana
6
22/03/2017
-
120
Nanostring microRNA microarry analysis of p53 and Mdm2 knockout mouse hearts compared to vehicle-injected negative controls
microRNA profiling by array
Mus musculus
12
22/03/2017
-
142
-
Transcription profiling of wild type and Stella knockout oocytes, wild type and Stella maternal/zygotic knockout embryos to study to the role of Stella in early mouse development
RNA-seq of coding RNA
Mus musculus
66
22/03/2017
-
ENA
229
-
Retinoic acid mediated neural and mesoderm specification during vertebrate trunk development
RNA-seq of coding RNA from single cells
Mus musculus
539
22/03/2017
-
ENA
252
-
Gene expression analysis in mouse embryonic stem cells containing β-catenin lysine 49 to alanine mutation
transcription profiling by array
Mus musculus
12
21/03/2017
92
-
Single-cell RNA-sequencing resolves a CD4+ T cell fate bifurcation
RNA-seq of coding RNA from single cells
Mus musculus
1598
21/03/2017
-
ENA
539
Gene network analysis of interstitial macrophages after treatment with induced pluripotent stem cells secretome (iPSC-cm) in the bleomycin injured rat lung
transcription profiling by array
Rattus norvegicus
7
20/03/2017
-
117
Identification of Interferon Regulated Genes (IRGs) in the chicken lung and spleen
transcription profiling by array
Gallus gallus
32
20/03/2017
-
101
-
RNA-seq of Cellulophaga baltica phage 18:3 infection
RNA-seq of coding RNA
Cellulophaga baltica
36
20/03/2017
-
ENA
90
-
Transcription profiling by array of Anopheles gambiae: Tiassale following Maf-S knockdown by RNA interference
transcription profiling by array
Anopheles gambiae
5
19/03/2017
-
107
-
Methylation profiling by array of dentate gyrus in the rat model of long-term potentiation
methylation profiling by array
Rattus norvegicus
8
16/03/2017
-
155
-
RNA-Seq analysis of transcriptomes of B. amyloliquefaciens FZB42 in biofilm formation and planktonic cells
RNA-seq of coding RNA
Bacillus amyloliquefaciens
4
16/03/2017
-
ENA
112
-
ChIPSeq profiling of LIR3 binding sites in C.elegans
ChIP-seq
Caenorhabditis elegans
3
16/03/2017
-
ENA
116
-
Functional sequestration of MOAG-2/LIR-3 by polyglutamine expansion proteins
RNA-seq of coding RNA
Caenorhabditis elegans
27
16/03/2017
-
ENA
119
-
Single cell RNA-sequencing of Spike-ins and mESC using STRT-Seq on C1 System
RNA-seq of coding RNA from single cells
Mus musculus
1
15/03/2017
-
ENA
163
-
Effect of MIR-375 expression on UM-SCC-1
transcription profiling by array
Homo sapiens
6
15/03/2017
-
146
-
Whole genome gene expression analysis of a genomic mouse model of tauopathy
transcription profiling by array
Mus musculus
6
15/03/2017
128
-
Study of the quorum sensing regulon of the acidophilic Acidithiobacillus ferrooxidans ATCC23270 with cDNA microarrays
transcription profiling by array
Acidithiobacillus ferrooxidans ATCC 23270
12
15/03/2017
-
102
-
OFD1 interacts with the Preinitiation complex of translation and regulates translation of specific targets in the kidney
transcription profiling by array
Mus musculus
8
15/03/2017
-
141
-
Single cell RNA-sequencing of Spike-ins and mESC using Smart-Seq2 on 96-well plates
RNA-seq of coding RNA from single cells
Mus musculus
56
14/03/2017
-
ENA
194
-
RNA-seq analysis of neutrophils from CD40L-deficient patients and healthy controls, as well as HL-60 promielocytic cell line
RNA-seq of coding RNA
Homo sapiens
24
14/03/2017
ENA
231
-
Mouse bone marrow-derived dendritic cell differentiation in dense and sparse cultures
transcription profiling by array
Mus musculus
16
14/03/2017
-
104
-
Identification of target genes of the transcription factors TCF1 and TCF3 in mouse embryonic stem cells (ChIP-Seq)
ChIP-seq
Mus musculus
4
14/03/2017
-
ENA
110
-
Transcription profiling by array of mouse white adipose tissue from miR-22 knockouts and littermates
transcription profiling by array
Mus musculus
6
13/03/2017
-
101
-
Transcription profiling by array of skeletal muscles from miR-22 KO, miR-22/ERalpha knockout, and miR-22KO/muscle-specific ERalpha knockout mice against wild type controls to study the mutual regulation of miR-22 and ERalpha in muscle tissue
transcription profiling by array
Mus musculus
18
13/03/2017
-
93
-
Generation of a new mouse model of glaucoma characterized by reduced expression of the AP-2 and AP-2
DNA-seq
Mus musculus
1
10/03/2017
-
ENA
135
-
DNA methylation variations are required for reversible EMT induced by cancer-associated fibroblasts in PCa cells
RNA-seq of coding RNA
Homo sapiens
12
09/03/2017
-
ENA
185
-
Gene expression data for worker honey bees experimentally exposed to a dual infection with Deformed wing virus and Nosema ceranae
transcription profiling by array
Apis mellifera
20
08/03/2017
168
-
Single cell RNA-sequencing of Spike-ins and Control RNA using 10x Genomics Chromium system
RNA-seq of coding RNA from single cells
Homo sapiens
2
08/03/2017
-
ENA
310
-
Transcription profiling of THP-1 cells under hypoxic growth conditions
transcription profiling by array
Homo sapiens
9
08/03/2017
-
146
-
MiRNome profiling of glioblastoma tissues and peritumoral regions
microRNA profiling by high-throughput sequencing
Homo sapiens
23
08/03/2017
-
160
-
Myocardial Gene Expression Profiling to Predict and Identify Cardiac Allograft Acute Cellular Rejection
transcription profiling by array
Homo sapiens
36
07/03/2017
148
-
Impact of BRAF kinase inhibitors on miRNomes and transcriptomes of melanoma cells (gene expression dataset)
transcription profiling by array
Homo sapiens
18
06/03/2017
-
219
-
Impact of BRAF kinase inhibitors on miRNomes and transcriptomes of melanoma cells (miRNA dataset)
microRNA profiling by array
Homo sapiens
18
06/03/2017
-
154
-
RNA-seq of sea ice bacteria grown at two temperatures and two growth phases
RNA-seq of coding RNA
Polaribacter irgensii, Shewanella frigidimarina
8
05/03/2017
-
ENA
135
-
Gene expression profile of in vivo and in vitro matured human oocytes revealed by microarray analysis
transcription profiling by array
Homo sapiens
12
05/03/2017
-
133
-
Expression data from Ribonuclease Inhibitor (RI/Rnh1) deficient Human K562 cells
RNA-seq of coding RNA
Homo sapiens
6
05/03/2017
-
ENA
123
-
Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryo reveals hundreds of conserved translating sORFs
RNA-seq of coding RNA
Drosophila melanogaster
3
05/03/2017
-
ENA
121
-
Fatty acid composition of developing tree peony (Paeonia section Moutan DC.) seeds and transcriptome analysis during seed development
RNA-seq of coding RNA
Paeonia ostii
6
04/03/2017
-
ENA
110
-
DNA methylation variations are required for reversible EMT induced by cancer-associated fibroblasts in PCa cells
methylation profiling by array
Homo sapiens
24
03/03/2017
-
157
-
Transcriptomic Analysis of Responses to Imbalanced Carbon:Nitrogen Availabilities in Rice Seedlings
transcription profiling by array
Oryza sativa Japonica Group
12
02/03/2017
-
126
-
Transcriptomic profiling of lung monocytes and macrophages in mice
transcription profiling by array
Mus musculus
14
01/03/2017
113
-
Transcriptional regulation of human pterygial-derived fibroblasts in response to FCS and TGFbeta
transcription profiling by array
Homo sapiens
12
01/03/2017
106
-
Transcription profiling of tobacco leaf expressing ascorbate oxidase (AO) under low and high light conditions to study the role of AO in the acclimation of photosynthesis to high light
transcription profiling by array
Nicotiana tabacum
18
01/03/2017
-
95
-
A cytosolic Ezh1 isoform modulates PRC2-Ezh1 repressive function as adaptive epigenetic response in post-mitotic cells
ChIP-seq
Mus musculus
10
01/03/2017
-
ENA
149
-
Transcription profiling by array of acute myeloid leukemia HL-60 cells with isocitrate dehydrogenase mutations and the all-trans-retinoic acid myeloid differentiation pathway
transcription profiling by array
Homo sapiens
26
01/03/2017
-
134
-
A late blight effector promotes a plant growth and development pathway to antagonise immunity
transcription profiling by array
Solanum tuberosum
8
01/03/2017
-
96
-
Expression Profiling of Avian Pathogenic E. coli WT and mutant
RNA-seq of coding RNA
Escherichia coli K-12
12
01/03/2017
-
ENA
105
-
A dynamic switch of Ezh1 isoforms controls PRC2 mediated adaptive epigenetic response in post-mitotic cells
RNA-seq of coding RNA
Mus musculus
6
01/03/2017
-
ENA
103
-
Transcriptome profiling of switchgrass over expressing Medicago STENOFOLIA (STF) gene
transcription profiling by array
Panicum virgatum
6
28/02/2017
-
68
-
Deletion of ribosomal protein genes is a common vulnerability in human cancer, particularly in concert with TP53 mutation
genotyping by array
Homo sapiens
93
28/02/2017
-
153
-
Gene expression analysis of the wild-type (N3433) and pcnB mutant (IBPC903) using custom microarrays
transcription profiling by array
Escherichia coli str. K-12 substr. MG1655
3
28/02/2017
-
75
-
Custom microarray analysis of small RNAs expression in E.coli with a focus on central carbon metabolism
transcription profiling by array
Escherichia coli str. K-12 substr. MG1655
3
28/02/2017
-
74
-
ATAC-seq of human lymphoblastoid cells (LCL)
ATAC-seq
Homo sapiens
54
28/02/2017
-
ENA
88
-
Transcription profiling by array of the cerebral hemisphere of chickens selected for and against fearfulness
transcription profiling by array
Gallus gallus
23
28/02/2017
-
48
-
Transcription profiling by array of the hypothalmus of chickens hatched in a hatchery or stress free environment
transcription profiling by array
Gallus gallus
16
28/02/2017
-
46
-
Temporal gene expression profiling of ischemic brain injury in rats after Semax and Pro-Gly-Pro treatment
transcription profiling by array
Rattus norvegicus
6
28/02/2017
57
-
Transcription profiling by array of heat-stressed Arabidopsis plants
transcription profiling by array
Arabidopsis thaliana
4
28/02/2017
-
102
-
Transcription profiling by array of heat-stressed maize plants
transcription profiling by array
Zea mays subsp. mays
8
28/02/2017
-
89
-
Transcription profiling of chicken liver after alpha- and gamma-tocopherol supplementation in case of increased oxidative stress susceptibility
transcription profiling by array
Gallus gallus
20
28/02/2017
41
-
The yeast osmostress response is carbon source dependent
RNA-seq of coding RNA
Saccharomyces cerevisiae S288c
15
27/02/2017
-
ENA
91
-
ApoE-MouseExperiment (heart)
transcription profiling by array
Mus musculus
168
27/02/2017
59
-
Gene expression in cutaneous lupus erythematosus
transcription profiling by array
Homo sapiens
16
24/02/2017
-
105
-
Base resolution maps of mutations, 5-methylcytosine and 5-hydroxymethylcytosine, and transcriptome of blood, tumour and margin samples from a glioblastoma multiforme patient
DNA-seq, methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Homo sapiens
17
24/02/2017
ENA
322
-
DNA methylation landscape of ocular tissue relative to matched peripheral blood
methylation profiling by array
Homo sapiens
58
23/02/2017
67
-
Transcription profiling of heart tissue from mice with heart-specific knockout of p53 and Mdm2
transcription profiling by array
Mus musculus
21
23/02/2017
-
111
-
Translational profiling of HEK293 cells exposed to cold shock (32 degrees C) and untreated (37 degrees C)
transcription profiling by array
Homo sapiens
6
23/02/2017
-
67
-
Transcription profiling by array of human CD138 purified bone marrow plasma cells, CD27 memory B-cells, polyclonal plasmablastic cells and human myeloma cell lines
transcription profiling by array
Homo sapiens
58
23/02/2017
-
167
-
Transcript profiling of plants ectopically expressing DOF5.4 / OBF BINDING PROTEIN 4 (OBP4)
RNA-seq of coding RNA
Arabidopsis thaliana
11
23/02/2017
ENA
127
-
Transcription profiling by array of Arabidopsis NCED3 mutants and wild-type controls under heat stress
transcription profiling by array
Arabidopsis thaliana
4
23/02/2017
-
86
-
Transcription profiling by array of Arabidopsis HSF triple mutants and wild-type controls under heat stress
transcription profiling by array
Arabidopsis thaliana
4
23/02/2017
-
72
-
Transcription profiling by array of heat-stressed soybean plants
transcription profiling by array
Glycine max
4
23/02/2017
-
58
-
Transcription profiling by array of heat-stressed rice plants
transcription profiling by array
Oryza sativa Japonica Group
4
23/02/2017
-
80
-
Transition of embryonic stem cells from ground state pluripotency (RNA-seq)
RNA-seq of coding RNA, RNA-seq of non coding RNA
Mus musculus
8
22/02/2017
-
ENA
133
-
Transcription profiling by array of mouse embryonic stem cells to study the transition from ground state pluripotency
transcription profiling by array
Mus musculus
12
22/02/2017
-
90
-
Transcription profiling by array of Pichia pastoria strains with different gene dosage of Rhizopus oryzae lipase (Rol) as a model protein
transcription profiling by array
Komagataella pastoris
35
22/02/2017
80
-
TEF-seq/NET-seq applied to factors Rpb3, Paf1, Spt6, Spt16, Cet1, Pcf11, Ssu72, Set2
RNA-seq of coding RNA
Saccharomyces cerevisiae
38
22/02/2017
ENA, ENA
282
-
RNA sequencing of CD45-negative cells isolated from CNS and lung of GM-CSFind x CD4-CreERT2 and control mice
RNA-seq of coding RNA
Mus musculus
15
21/02/2017
ENA
91
-
Differential analysis of GM-CSF-induced inflammatory monocyte-derived cells (MCs) isolated from various organs
RNA-seq of coding RNA
Mus musculus
15
21/02/2017
ENA
89
-
ChIP-seq analysis identifies p27(Kip1)-target genes involved in cell adhesion and cell signalling in mouse embryonic fibroblasts
ChIP-seq
Mus musculus
2
21/02/2017
ENA
122
-
RNA sequencing data of bone marrow endothelial cell subpopulations type H, type E and type L
RNA-seq of coding RNA
Mus musculus
9
20/02/2017
-
ENA
256
-
Rare tumor cell isolation and genomic variation detection in pleural effusion samples from lung cancer patients
DNA-seq
Homo sapiens
6
17/02/2017
-
ENA
291
-
Transcription profiling by array of mouse neural stem cells following CRISPR/Cas9 knockdown of Disp3
transcription profiling by array
Mus musculus
11
17/02/2017
98
-
Transcription profiling by array of Drosophila melanogaster park25 (parkin) and pink1 (Pink1) mutants to identify neuron-specific transcriptional changes that may be relevant to Parkinson's disease
transcription profiling by array
Drosophila melanogaster
36
17/02/2017
-
163
-
RNA-seq of human and mouse stem-cell derived neurons and mouse primary cortical neurons after KCl-induced membrane depolarization against controls
RNA-seq of coding RNA
Homo sapiens, Mus musculus
30
16/02/2017
-
ENA
175
-
Type I interferon-regulated gene expression and signaling in murine mixed glial cells lacking signal transducers and activators of transcription 1or 2 or interferon regulatory factor 9
transcription profiling by array
Mus musculus
32
15/02/2017
169
-
Response of Candida albicans to taurocholate
transcription profiling by array
Candida albicans
4
15/02/2017
-
102
-
Transcription profiling by high throughput sequencing of Medicago truncatula hairy root lines overexpressing TSAR1 or TSAR2
RNA-seq of coding RNA
Medicago truncatula
9
15/02/2017
-
ENA
219
-
Transcriptional profilling of female mice liver as a function of age
transcription profiling by array
Mus musculus
60
15/02/2017
126
-
Methylation profiling of ten breast cancer cell lines to identify new targets for basal-like breast cancers
methylation profiling by high throughput sequencing
Homo sapiens
10
14/02/2017
-
ENA
192
-
RNASeq of ten human breast cancer cell lines
RNA-seq of coding RNA
Homo sapiens
10
14/02/2017
-
ENA
292
-
MicroRNA sequencing of human serum exosomes from women with different age and hormonal status
microRNA profiling by high throughput sequencing
Homo sapiens
31
14/02/2017
-
ENA
126
-
Transcriptome sequencing of bloodstream form Trypanosoma brucei expressing VSG121
RNA-seq of coding RNA
Trypanosoma brucei
1
12/02/2017
-
ENA
106
-
RNA-seq of different tissues from Sus scrofa
RNA-seq of coding RNA
Sus scrofa
60
10/02/2017
-
ENA
36
RNA-seq analysis of budding yeast wild type (BY4741) and prp45(1-169) mutant
RNA-seq of coding RNA
Saccharomyces cerevisiae
4
10/02/2017
-
ENA
183
-
Transcription profiling of Brassica nigra challenged by ozone, Pieris brassicae, or both ozone followed by P. brassicae feeding
transcription profiling by array
Brassica nigra
17
10/02/2017
-
154
-
Time series RNA-seq of temperature-entrained and light-entrained bloodstream and procyclic form Trypanosoma brucei cultures
RNA-seq of coding RNA
Trypanosoma brucei
78
10/02/2017
-
ENA
159
-
Transcription profiling by array of human CD138 purified bone marrow plasma cells from patients with multiple myeloma
transcription profiling by array
Homo sapiens
630
09/02/2017
-
353
-
Transcription profiling by array of human CD138 purified bone marrow plasma cells from relapsed multiple myeloma patients
transcription profiling by array
Homo sapiens
82
09/02/2017
-
251
-
Microarray data of foetal liver Lin- cKit+ cells obtained from Fh1-deficient and control 14.5 dpc mouse embryos
transcription profiling by array
Mus musculus
7
08/02/2017
-
143
-
Transcriptional profiling of calyx abscission zone cells of citrus fruits and adjacent fruit rind cells during ethylene-promoted fruit abscission
transcription profiling by array
Citrus sinensis
18
08/02/2017
-
127
-
miRNA profiling in leaf and cork tissues of Q. suber reveals novel miRNAs and tissue-specific expression patterns
microRNA profiling by high throughput sequencing
Quercus suber
2
07/02/2017
-
54
-
Transcription profiling by microarray of barley mutant (G132) and its wild type (Hordeum vulgare cv. Graphic) under high CO2 concentration
transcription profiling by array
Hordeum vulgare
24
07/02/2017
175
-
Detection of transposon RNA fusions
RNA-seq of coding RNA
Mus musculus
232
07/02/2017
-
ENA
39
-
Microarray time course transcriptional profiling of Human CD4+ T Cell activation across 20 donors
transcription profiling by array
Homo sapiens
137
06/02/2017
-
229
-
Distinct and sexually dimorphic X dosage compensation states in the mammalian germline
RNA-seq of coding RNA
Mus musculus
184
06/02/2017
ENA
441
-
Transcription profiling by array of IDH1 mutant and wild type human glioblastoma samples
transcription profiling by array
Homo sapiens
52
05/02/2017
-
284
-
Altered expression of maize PLASTOCHRON1 enhances biomass and seed yield by extending cell division duration
RNA-seq of coding RNA
Zea mays
12
04/02/2017
-
ENA
189
-
Whole genome sequencing of spontaneous tumors arising in mice as a result of centrosome amplification
whole chromosome random sequencing
Mus musculus
14
04/02/2017
-
ENA
171
-
Expression profiling of budding cells in colorectal cancer suggests an EMT-like phenotype and molecular subtype switching
RNA-seq of coding RNA
Homo sapiens
16
04/02/2017
-
ENA
200
-
Genome-Wide Identification of the FRS12 Binding Sites by Tandem Chromatin Affinity Purification – Seq Analysis in Arabidopsis thaliana
ChIP-seq
Arabidopsis thaliana
3
04/02/2017
-
ENA
233
-
RNA-seq of coding RNA to identify genes regulated by FRS12 at night time in Arabidopsis thaliana
RNA-seq of coding RNA
Arabidopsis thaliana
6
04/02/2017
-
ENA
173
-
GRO-seq analysis U1810 cells after 8h Rapamycin treatment and DMSO control
GRO-seq
Homo sapiens
2
03/02/2017
-
ENA
157
-
Gene expression profiles in cancer stem cells isolated as ALDHhigh cells from human endometrioid adenocarcinoma cells, HEC-1
transcription profiling by array
Homo sapiens
2
03/02/2017
-
135
-
Effect of CtBP1 knockdown in SCC25 cells
transcription profiling by array
Homo sapiens
6
03/02/2017
-
163
RNA sequencing of Geranium pyrenaicum and G. robertianum petioles exposed to 2 or 11.5 hours of control white light or low R:FR light
RNA-seq of coding RNA
Geranium pyrenaicum, Geranium robertianum
24
01/02/2017
ENA
45
-
Novel genes involved in the pathophysiology of gonadotropin-dependent adrenocortical tumorigenesis in mice
transcription profiling by array
Mus musculus
24
01/02/2017
-
149
-
Identification of a tumor suppressor network in T-cell leukemia
genotyping by array
Homo sapiens
8
01/02/2017
-
165
-
The transcriptional signature of ascites-associated macrophages is linked to interferon signaling and a favorable clinical outcome in a subgroup of ovarian carcinoma patients
RNA-seq of coding RNA
Homo sapiens
13
01/02/2017
-
ENA
213
-
Comparison of root transcriptomes in four soybean cultivars with high and low isoflavonoid content
RNA-seq of coding RNA
Glycine max
12
01/02/2017
-
ENA
110
RNA-seq in HUVECs overexpressing Sox18 and treated with Sm4
RNA-seq of coding RNA
Homo sapiens
12
01/02/2017
-
ENA
121
-
Sox18 ChIP-seq in HUVECs
ChIP-seq
Homo sapiens
4
01/02/2017
-
ENA
180
-
SOX7 ChIP-seq in HUVECs
ChIP-seq
Homo sapiens
4
01/02/2017
-
ENA
134
-
microRNA profiling by array of human umbilical venous endothelial cells (HUVECs) stimulated with bone morphogenetic protein 4 (BMP4)
microRNA profiling by array
Homo sapiens
12
01/02/2017
100
-
Transcription profiling of DcgA knockout in Dictyostelium discoideum
RNA-seq of coding RNA
Dictyostelium discoideum
8
01/02/2017
-
ENA
103
-
Expression profiling experiment on Pkd1-mutant mice and mice induced with nephrotoxin DCVC
RNA-seq of coding RNA
Mus musculus
21
31/01/2017
ENA
182
5-hydroxymethylcytosine (5hmC) methylation profiling of adult mouse brain and liver tissues (hMeDIP-seq)
methylation profiling by high throughput sequencing
Mus musculus
24
31/01/2017
-
ENA
169
-
Expression profiling of adult mouse brain and liver tissues (RNA-seq)
RNA-seq of coding RNA
Mus musculus
24
31/01/2017
-
ENA
194
-
De novo and reference transcriptome assembly of transcripts expressed during flower development provide insight into the seed setting ability of tetraploid red clover (Trifolium pratense L.)
RNA-seq of coding RNA
Trifolium pratense
12
31/01/2017
-
ENA
110
-
Genotyping by array of 73 acute lymphoblastic leukemia samples and their matched control remission samples to characterise somatic events associated with leukemic transformation
genotyping by array
Homo sapiens
146
31/01/2017
-
192
-
192 adult acute lymphoblastic leukemia (ALL) cases characterized on the Affymetrix Human Genome U133 Plus 2.0 Microarray
transcription profiling by array
Homo sapiens
192
31/01/2017
-
244
-
Transcription profiling of breast muscle in heat stressed layer or broiler chicken compared to control temperature
transcription profiling by array
Gallus gallus
32
31/01/2017
-
81
-
Transcriptomic profiling of antigen-specific T cells at the single-cell level after clearance of hepatitis C virus
RNA-seq of coding RNA from single cells
Homo sapiens
72
31/01/2017
-
ENA
195
-
Transcriptomic characterization of the Madin-Darby bovine kidney (MDBK) cells and its comparison with cattle primary cultured hepatocytes
transcription profiling by array
Bos taurus
8
31/01/2017
88
-
Transcriptomic characterization of cattle primary cultured hepatocytes and its comparison with liver tissue
transcription profiling by array
Bos taurus
12
31/01/2017
88
-
Differential Ago-RIP-Seq for the identification of miR-375 targets in prostate cancer cells
RIP-seq
Homo sapiens
18
31/01/2017
-
ENA
112
-
Microarray analysis of the Lysosome-dependent activation of human dendritic cells by the vaccine adjuvant QS-21
transcription profiling by array
Homo sapiens
12
30/01/2017
-
116
Methylation profiling by array of human breast cancer cell line MDA-MB-231 with or without transfection of putative tumour suppressor gene ITIH5
methylation profiling by array
Homo sapiens
6
30/01/2017
-
145
-
Effect of estradiol (E2) exposure and KMT2B knockdown on gene expression in MCF-7 cells
transcription profiling by array
Homo sapiens
8
30/01/2017
-
127
-
microRNA profiling of serum microRNA from high grade serous ovarian carcinoma
transcription profiling by array
Homo sapiens
130
30/01/2017
149
-
Whole Genome Analysis of the Heat Stress Response in Commercial Baker's Yeast (Saccharomyces cerevisiae) with Comparative Statistical Approaches
transcription profiling by array
Saccharomyces cerevisiae S288c
12
30/01/2017
83
-
Transcription profiling by array of human MDA-MB-231 breast cancer cell line with or without transfection of putative tumour suppressor gene ITIH5 to study the gene's role in suppressing breast cancer metastatic growth
transcription profiling by array
Homo sapiens
8
30/01/2017
-
119
-
Proteomic profiling of NCI60 cell lines from Cancer Cell Line Encyclopedia
proteomic profiling by mass spectrometer
Homo sapiens
60
27/01/2017
-
335
-
Monitoring global differential gene expression in Corynebacterium glutamicum in response to sigma factor SigD disruption and overexpression
RNA-seq of coding RNA
Corynebacterium glutamicum ATCC 13032
4
27/01/2017
-
ENA
105
-
Whole genome transcription profiling of the JN-DSCRT1 cell line treated with Trabectedin
transcription profiling by array
Homo sapiens
11
27/01/2017
112
-
Microarray analysis revealed novel genes and pathways associated with neonatal unilateral ureteral obstruction
transcription profiling by array
Rattus norvegicus
7
26/01/2017
-
109
-
Transcription profiling of Drosophila expressing mutant Abeta under treatment with lithium
transcription profiling by array
Drosophila melanogaster
14
26/01/2017
-
135
-
Autoantigen microarrays of NZM2328 lupus mice treated with induced CD4+ regulatory T cells or natural CD4+ regulatory T cells
antigen profiling
Mus musculus
24
26/01/2017
-
132
-
RNA-seq of NEAT1 knockdown in neuronal excitability
RNA-seq of coding RNA
Homo sapiens
17
26/01/2017
-
ENA
128
-
hDBR1 OVEREXPRESSED CALU6 AND 293T CELLS VS. CONTROL CELLS
RNA-seq of coding RNA
Homo sapiens
16
25/01/2017
-
ENA
137
-
Transcriptional profiling of a slyA mutant and a slyA-overexpression strain of Escherichia coli MG1655 in order to elucidate the SlyA regulon
transcription profiling by array
Escherichia coli str. K-12 substr. MG1655
16
25/01/2017
-
113
-
Functional link between TFIIB and Mediator
ChIP-seq
Saccharomyces cerevisiae
51
24/01/2017
-
ENA
168
-
Transcription profiling by array of two peritoneal mononuclear phagocyte populations from infection-free peritoneal dialysis patients
transcription profiling by array
Homo sapiens
10
23/01/2017
169
Gene expression in soleus muscle of mouse inbred strains LG/J and SM/J
transcription profiling by array
Mus musculus
6
23/01/2017
148
-
Methylation profiling by array of a solitary Peutz-Jeghers colon polyp in a healthy individual
methylation profiling by array
Homo sapiens
1
23/01/2017
-
141
-
Barley transcriptome analyses upon interaction with different aphid species identifies thionins contributing to resistance
transcription profiling by array
Hordeum vulgare
24
23/01/2017
-
139
-
Transcriptome of Sinorhizobium meliloti RNase mutants
transcription profiling by array
Sinorhizobium meliloti
8
21/01/2017
-
158
-
microRNA profiling by array of gemcitabine sensitive BxPC-3 pancreatic cancer cell lines and their derived resistant subclones, Bx-GEM
microRNA profiling by array
Homo sapiens
6
20/01/2017
181
-
Gene expression profiling of gemcitabine sensitive BxPC-3 pancreatic cancer cell lines and their derived resistant subclones, Bx-GEM
transcription profiling by array
Homo sapiens
6
20/01/2017
194
-
Altered mucosal expression of microRNAs in pediatric patients with inflammatory bowel disease
microRNA profiling by high-throughput sequencing
Homo sapiens
12
18/01/2017
-
ENA
176
-
Transcription profiling by array of the great vessel establishment in the zebrafish embryo
transcription profiling by array
Danio rerio
6
17/01/2017
-
163
-
RNA-seq of FACS purified cardiomyocytes from Drosophila melanogaster embryos at stage 13-16
RNA-seq of coding RNA
Drosophila melanogaster
2
17/01/2017
-
ENA
187
-
Peripheral tissue instruction is the primary determinant of CD8+ T cell pathogenicity: transcription profiling by array of donor CD8+ effector T cells isolated from the secondary lymphoid organs, blood and GVHD-target organs at D+6 post-transplant (B6>129 model)
transcription profiling by array
Mus musculus
35
16/01/2017
243
-
Transcription profiling of liver from from spontaneously hypertensive rats expressing human C-reactive protein treated with salsalate
transcription profiling by array
Rattus norvegicus
16
15/01/2017
-
183
-
Transcription profiling by high throughput sequencing of methamphetamine-sensitized and saline-control mouse nucleus accumbens
RNA-seq of coding RNA
Mus musculus
2
15/01/2017
-
ENA
169
-
Gene expression analysis in CITED2 knockdown MDA-MB-231 human breast cancer cells
transcription profiling by array
Homo sapiens
2
14/01/2017
-
221
-
A Long Noncoding RNA Acts as a Tumor Promoter in Hepatocellular Carcinoma
transcription profiling by array
Homo sapiens
5
14/01/2017
247
-
SAMHD1 restricts HIV-1 integration in human macrophages
transcription profiling by array
Homo sapiens
3
14/01/2017
185
-
Chromatin conformation of the Shh locus in limbs
DNA-seq
Mus musculus
26
12/01/2017
-
ENA
223
-
Expression analysis of Pea3 overexpression in SH-SY5Y cell line
transcription profiling by array
Homo sapiens
6
11/01/2017
-
160
-
Transcriptomics analysis of E. faecalis V583 exposed to subinhibitory concentration of chlorhexidine
transcription profiling by array
Enterococcus faecalis V583
6
11/01/2017
-
168
-
Nutritional programming of lifespan: Excessive sugar consumption in early adulthood curtails Drosophila survival by inhibiting dFOXO
RNA-seq of coding RNA
Drosophila melanogaster
14
11/01/2017
-
ENA
186
-
Comparative 454 pyrosequencing of transcripts to provide a resource for the study of embryogenesis of coconut (Cocos nucifera L.)
RNA-seq of coding RNA
Cocos nucifera L.
4
11/01/2017
-
ENA
156
-
RNA-seq of coding RNA from 22 wild-type strains of Drosophila melanogaster on the Drosophila Genetic reference Panel (DGRP) at embryonic time point 10-12 hrs after egg laying
RNA-seq of coding RNA
Drosophila melanogaster
22
10/01/2017
-
ENA
221
-
3'-Tag-Seq of Drosophila melanogaster embryos from 82 wild-type strains from the Drosophia Genetic Reference Panel (DGRP) over three time-points during embryogenesis
RNA-seq of coding RNA
Drosophila melanogaster
254
10/01/2017
-
ENA
264
-
Drosophila Genetic Reference Panel (DGRP) F1 RNA-seq - a comparison to 3prime-tag-seq variance decomposition analysis
RNA-seq of coding RNA
Drosophila melanogaster
12
10/01/2017
-
ENA
169
-
RNA-seq of Malassezia sympodialis
RNA-seq of coding RNA
Malassezia sympodialis
7
10/01/2017
ENA
148
-
BiTS Chromatin Immunoprecipitation of H3K4me3 and H3K27ac in Drosophila melanogaster differentiating cardiomyocytes
ChIP-seq
Drosophila melanogaster
2
10/01/2017
-
ENA
161
-
Transcriptomic data from early stages during zygotic embryo development in Pinus sylvestris L
RNA-seq of coding RNA
Pinus sylvestris
9
09/01/2017
ENA
163
-
Microarray analysis of differences in circulating miRNA expression between responders and non-responders to treatment of rheumatoid arthritis with allogeneic adipose-derived mesenchymal stem cells
transcription profiling by array
Homo sapiens
20
09/01/2017
174
-
5' CAGE at three embryonic times points in 82 Drosophila lines
RNA-seq of coding RNA
Drosophila melanogaster
29
09/01/2017
-
ENA
296
-
Transcription profiling by array of term placentas from women with pre-pregnancy obesity against those from women with normal pre-pregnancy weight
transcription profiling by array
Homo sapiens
10
07/01/2017
-
206
-
Mapping regulatory variation in sensory neurons using IPS lines from the HIPSCI project
RNA-seq of coding RNA
Homo sapiens
375
06/01/2017
-
ENA
77
-
EBIO does not induce cardiomyogenesis in human pluripotent stem cells but modulates cardiac subtype enrichment by lineage-selective survival
transcription profiling by array
Homo sapiens
6
04/01/2017
-
202
-
Gene expression profiling of bronchoalveolar lavage cells preceding a clinical diagnosis of chronic lung allograft dysfunction
transcription profiling by array
Homo sapiens
17
04/01/2017
211
-
microRNA profiling by array of paired breast tissues isolated immediately after breast cancer surgery and 30 mins after surgery with or without TARGIT radiotherapy treatment
microRNA profiling by array
Homo sapiens
28
03/01/2017
222
-
Transcriptional analysis of breast circadian clock
transcription profiling by array
Mus musculus
12
02/01/2017
176
-
Arabidopsis mutant with reduced expression of the Lys biosynthesis enzyme L,L-diaminopimelate aminotransferase (dapat)
transcription profiling by array
Arabidopsis thaliana
6
02/01/2017
-
162
-
Transcription profiling of human pluripotent cells cultured as suspension aggregates treated with CHIR99021
transcription profiling by array
Homo sapiens
18
30/12/2016
-
220
-
Transcription profiling of human bone marrow-derived mesenchymal stem cells transfected with miR-1246 mimic
transcription profiling by array
Homo sapiens
12
30/12/2016
-
184
-
Translational and transcriptional RNA-seq of SBDS cell lines
RNA-seq of coding RNA
Mus musculus
17
29/12/2016
-
ENA
232
-
RNASeq of musculoskeletal ageing using human mesenchymal stem cells and their tissue constructs
RNA-seq of coding RNA
Homo sapiens
30
28/12/2016
-
ENA
284
-
Transcription profiling of rice plants under the Sds (severe drought in soil) condition in shoot basal region
transcription profiling by array
Oryza sativa
4
26/12/2016
-
220
-
Transcription profiling of rice plants under the Md3 (pF3.5) condition in shoot basal region
transcription profiling by array
Oryza sativa
4
26/12/2016
-
181
-
Transcription profiling of rice plants under the Md2 (pF2.5) condition in shoot basal region
transcription profiling by array
Oryza sativa
4
26/12/2016
-
175
-
Transcription profiling of rice plants under the Sds (severe drought in soil) condition in shoots
transcription profiling by array
Oryza sativa
4
26/12/2016
-
179
-
Transcription profiling of rice plants under the Sda (Air-drying) condition in shoots
transcription profiling by array
Oryza sativa
4
26/12/2016
-
162
-
Transcription profiling of rice plants under the Md3 (pF3.5) condition in shoots
transcription profiling by array
Oryza sativa
4
26/12/2016
-
160
-
Transcription profiling of rice plants under the Md2 (pF2.5) condition in shoots
transcription profiling by array
Oryza sativa
4
26/12/2016
-
160
-
mouse hepatic gene whole transcript expression
transcription profiling by array
Mus musculus
6
25/12/2016
190
-
Transcription profiling by tiling array of wild-type or arp8-deleted budding yeast strains with or without hyperosmotic stress (0.4M NaCl)
transcription profiling by tiling array
Saccharomyces cerevisiae
24
24/12/2016
209
-
ChIP-seq of Escherichia coli RpoS during stationary phase
ChIP-seq
Escherichia coli str. K-12 substr. MG1655
2
23/12/2016
-
ENA
247
-
Transcription profling by array of murine pancreatic cancer cells treated with Fosl1 siRNA or control siRNA
transcription profiling by array
Mus musculus
6
23/12/2016
-
207
-
Gene expression patterns in 23 cervical samples of women having gone through different types of child birth
transcription profiling by array
Homo sapiens
24
22/12/2016
-
216
-
TFIIB ChIP-seq for S. cerevisiae - Genome-wide generalized additive models
ChIP-seq
Saccharomyces cerevisiae
2
22/12/2016
-
ENA
207
-
RNA expression in tongue squamous cell carcinoma, tumour free tongue tissue and control tongue
transcription profiling by array
Homo sapiens
44
21/12/2016
-
287
-
Deep sequencing of human naive CD4 T cells identifies miR-34c-5p as a novel regulator of T cell activation and HIV replication
microRNA profiling by high throughput sequencing
Homo sapiens
17
21/12/2016
-
ENA
269
-
Transcription profiling by array of Jurkat T cell line overexpressing miR-34c-5p
transcription profiling by array
Homo sapiens
5
21/12/2016
-
184
-
Defined chromosome structure in a minimal cell
DNA-seq
Mycoplasma pneumoniae M129
8
21/12/2016
-
ENA
227
-
RNA-Seq analyses of zebrafish cardiomyocytes at 72 hpf (hours post-fertilization)
RNA-seq of coding RNA
Danio rerio
2
20/12/2016
ENA
183
-
BMI1 regulates myogenic differentiation, Hippo signaling, and oncogene expression in embryonal rhabdomyosarcoma
RNA-seq of coding RNA
Homo sapiens
12
20/12/2016
-
ENA
211
-
Microarray analyses and miR-92a target prediction in primary mediastinal large B-cell lymphoma (PMBL) samples
transcription profiling by array
Homo sapiens
21
18/12/2016
-
244
-
RNA-seq of cerebrospinal fluid of Trypanosoma infected human patients
RNA-seq of coding RNA
Homo sapiens
13
17/12/2016
-
ENA
203
-
RNAseq of blood samples of Trypanosoma infected human patients
RNA-seq of coding RNA
Homo sapiens
6
17/12/2016
-
ENA
211
-
RNA-seq transcriptome profiling of the psychrophilic phytoplankton Fragilariopsis cylindrus under environmentally relevant growth limitations
RNA-seq of coding RNA
Fragilariopsis cylindrus
18
16/12/2016
-
ENA
309
-
Methylation Patterns in Han Chinese Neural Tube Defects Pedigrees
methylation profiling by array
Homo sapiens
24
15/12/2016
-
183
-
A systems toxicology approach for comparative assessment: Biological impact of an aerosol from a candidate modified-risk tobacco product and cigarette smoke on human organotypic bronchial epithelial cultures (miRNA data)
transcription profiling by array
Homo sapiens
357
15/12/2016
237
-
Comparative transcriptome analysis between immortalized ovarian surface epithelial (iOSE) and immortalized fallopian tube secretory epithelial (iFTE) cells
RNA-seq of coding RNA
Homo sapiens
8
15/12/2016
-
ENA
286
-
Functional Implications of microRNAs in Crohn’s Disease by Integrating microRNA and Messenger RNA Expression Profiling
microRNA profiling by array
Homo sapiens
30
15/12/2016
-
219
-
Investigation of the transcriptional changes associated with phenotype switching in Streptococcus equi subspecies equi strain 1691
RNA-seq of coding RNA
Streptococcus equi
6
15/12/2016
-
ENA
158
-
Transcriptional profiling of the MV4-11 cell line treated with trabectidin or azacitidin
transcription profiling by array
Homo sapiens
18
14/12/2016
201
-
Transcriptional profiling of Setd5 heterozygous and knockout mouse embryonic stem cells
RNA-seq of coding RNA
Mus musculus
6
13/12/2016
-
ENA
204
Methylation profiling by array of paired blood and saliva samples collected from ten volunteers in the Personal Genome Project (PGP) UK pilot study: PGP-UK10
methylation profiling by array
Homo sapiens
20
12/12/2016
-
191
-
Transcriptional responses to cold in five Pooideae species
RNA-seq of coding RNA
Brachypodium distachyon, Hordeum vulgare, Melica nutans, Nardus stricta, Stipa lagascae
59
12/12/2016
ENA
247
-
Transcription profiling by array of Solanum tuberosum leaves and tubers grown in altered above- and below-ground temperatures
transcription profiling by array
Solanum tuberosum
32
12/12/2016
-
198
-
Transcriptome profiling by array of Solanum tuberosum L. dormant and sprouting bud tissue
transcription profiling by array
Solanum tuberosum
8
12/12/2016
-
177
-
Transcriptional profiling by array of Solanum tuberosum cv. Agria leaf and tuber samples after mild heat stress
transcription profiling by array
Solanum tuberosum
16
12/12/2016
-
159
-
Exploiting native forces to capture chromosome conformation in mammalian cell nuclei
DNA-seq
Homo sapiens
32
10/12/2016
-
ENA
275
-
Transcriptomics analysis of Prunus L: Differential adaptative responses during short and long term hypoxia treatment
transcription profiling by array
Prunus persica
30
09/12/2016
163
-
The Sinorhizobium meliloti SmYbeY-dependent transcriptome probed with Sm14kOLI microarrays
transcription profiling by array
Sinorhizobium meliloti
8
08/12/2016
-
169
-
Intrinsic transcriptional heterogeneity in B cells controls early class switching to IgE
RNA-seq of coding RNA from single cells
Mus musculus
213
08/12/2016
-
ENA
337
-
RNA-seq of prefrontal cortex samples from 11-week old C57BL6/J and DBA/2J mice housed either with a mouse of the same strain or a mouse of the other strain
RNA-seq of coding RNA
Mus musculus
850
07/12/2016
ENA
310
-
RNA-seq from 53 human tissue samples from the Genotype-Tissue Expression (GTEx) Project
RNA-seq of coding RNA
Homo sapiens
18879
07/12/2016
-
-
2167
RNA-seq of immortalized rat thyrocytes (PCCl3) treated with two thyroid disrupting chemicals (ethylenethiourea and chlorpyrifos) against untreated controls
RNA-seq of coding RNA
Rattus norvegicus
48
06/12/2016
ENA
309
Transcription profiling by array of OsPIL1/DREB1A double-overexpressing Arabidopsis lines
transcription profiling by array
Arabidopsis thaliana
8
06/12/2016
-
249
-
Transcription profiling by array of Atlantic Salmon livers fed for 11-weeks with one of three experimental diets
transcription profiling by array
Salmo salar
18
05/12/2016
-
180
-
Transcriptome profiling by array of duodenal biopsies from patients with refractory celiac disease type II
transcription profiling by array
Homo sapiens
11
05/12/2016
-
242
-
Transcription profiling by array of the hypothalamus of chickens selected for and against fearfulness
transcription profiling by array
Gallus gallus
24
05/12/2016
-
165
-
Xanthomonas campestris pv. Campestris 8004 far-red light irradiation and XccBphP overexpression transcriptional analysis
RNA-seq of coding RNA
Xanthomonas campestris pv. campestris
6
03/12/2016
ENA
189
-
4-week mouse comparative study on effect of neutralizing IL-17A, IL-17F and TNFa antibodies
transcription profiling by array
Mus musculus
75
02/12/2016
-
259
Transcription profiling by array of canine histiocytic sarcoma cell line (DH82) infected with Onderstepoort strain of canine distemper virus compared with uninfected controls
transcription profiling by array
Canis lupus familiaris
8
02/12/2016
213
miRNA profiling of rhabdomyosarcoma-derived exosomes compared to donor cells, using the Affymetrix GeneChip miRNA 3.0 array
microRNA profiling by array
Homo sapiens
24
01/12/2016
176
-
Pathways regulated by oncogenic PTEN/PI3K/AKT signalling in NSCLC
transcription profiling by array
Homo sapiens
9
01/12/2016
-
322
-
RNA-seq of A431 cell line after gefitinib treatment
RNA-seq of coding RNA
Homo sapiens
12
01/12/2016
-
ENA
301
microRNA expression of K562, Me45 and HCT116, with or without p53 knock-out, treated with ionizing radiation
microRNA profiling by array
Homo sapiens
8
01/12/2016
366
-
In vitro assessment of acute exposure of ths2.2 aerosol on organotypic acute human bronchial tissue cultures
transcription profiling by array
Homo sapiens
364
01/12/2016
217
-
Transcriptome analysis of inflorescences of the tomato mutant unfinished flower development (ufd)
transcription profiling by array
Solanum lycopersicum
6
01/12/2016
-
201
-
MicroRNA profiling from pooled plasma samples of patients with sepsis and systemic inflammatory response syndrome (SIRS)
microRNA profiling by high-throughput sequencing
Homo sapiens
10
01/12/2016
-
ENA
213
-
microRNA profiling by array of the colon of patients with colorectal cancer compared with healthy controls (part 2)
microRNA profiling by array
Homo sapiens
11
01/12/2016
-
278
-
Transcription profiling of cholangiocarcinoma cell line Mz-ChA-1 overexpressing Period 1 (Per1)
transcription profiling by array
Homo sapiens
6
01/12/2016
-
175
-
microRNA profiling by array of peripheral blood mononuclear cells from patients with early onset psoriatic arthritis, rheumatoid arthritis and healthy controls
microRNA profiling by array
Homo sapiens
44
01/12/2016
-
186
Global DNA methylation and gene expression comparison of olfactory neurosphere-derived cells, fibroblasts and induced pluripotent stem cells derived from the same schizophrenic donors
methylation profiling by array
Homo sapiens
50
01/12/2016
231
-
Transcription profiling by array of human mesenchymal stromal cells from patients with type I diabetes before and after autologous hematopoietic stem cell transplantation
transcription profiling by array
Homo sapiens
12
01/12/2016
-
216
-
Transcription profiling by array of Candida albicans wild type and tup1 mutants under different pH conditions
transcription profiling by array
Candida albicans
12
01/12/2016
141
-
Evaluation of the Tobacco Heating System 2.2 (THS2.2). Part 5: microRNA expression from a 90-day rat inhalation study indicates that exposure to THS 2.2 aerosol causes reduced effects on lung tissue compared with cigarette smoke
transcription profiling by array
Rattus norvegicus
112
30/11/2016
195
-
Microarray analysis of islets of Langerhans from 3 week-old NOD, NOR and C57Bl/6 mice
transcription profiling by array
Mus musculus
12
30/11/2016
158
-
The differentially expressed genes of Zucker Diabetic Fatty Rats treated with Berberine against diabetes mellitus
transcription profiling by array
Rattus norvegicus
9
30/11/2016
-
151
-
Identification of urinary exosomal non-coding RNAs as novel biomarkers in chronic kidney disease
RNA-seq of non coding RNA
Homo sapiens
25
30/11/2016
-
ENA
209
-
Bacterial cellulose carrier maintains native endothelial cell differentiation in vitro
RNA-seq of coding RNA
Homo sapiens
28
30/11/2016
-
ENA
148
-
Differential expression in DEN/CCl4-induced murine hepatocellular carcinoma upon the genetic absence of Autotaxin (ATX) in hepatocytes
transcription profiling by array
Mus musculus
10
30/11/2016
-
149
-
Transcription profiling by array of 16 W12 basal cervical squamous epithelial cell clones
transcription profiling by array
Homo sapiens
48
30/11/2016
-
156
-
Differential RNA-seq for identifying toxin MazF and MqsR cleavage sites, beginning of transcripts and stationary phase cleavage sites in Escherichia coli (mRNA, rRNA and other ncRNA)
RNA-seq of non coding RNA
Escherichia coli K-12
25
30/11/2016
-
ENA
417
-
Transcription profiling by array of R27 plasmid genes in Escherichia coli MG1655 strain grown in logarithmic and early-stationary phase
transcription profiling by array
Escherichia coli str. K-12 substr. MG1655
6
30/11/2016
-
132
-
Splicing factor 1 modulates dietary restriction and TORC1 pathway longevity in C. elegans
RNA-seq of coding RNA
Caenorhabditis elegans, Homo sapiens
48
29/11/2016
-
ENA
507
-
Transcription profiling by array of pancreatic cells following p53-targeted RNA interference
transcription profiling by array
Homo sapiens
8
29/11/2016
-
184
-
RNA-seq transcription analysis of Herbaspirillum seropedicae phaC1 mutant strain in comparison with the wild type strain (SmR1)
RNA-seq of coding RNA
Herbaspirillum seropedicae
4
28/11/2016
-
72
-
Transcription profiling by array of pig peripheral blood mononuclear cells (PBMCs) vaccinated against porcine reproductive and respiratory syndrome (PRRS) to identify molecular pathways associated with "good" and "bad" PRRSV vaccine responders
transcription profiling by array
Sus scrofa
27
28/11/2016
-
128
-
Pediatric pineal germinomas: Epigenetic and genomic approach (transcription profiling)
transcription profiling by array
Homo sapiens
2
26/11/2016
-
143
-
Pediatric pineal germinomas: Epigenetic and genomic approach (methylation profiling)
methylation profiling by array
Homo sapiens
2
26/11/2016
-
122
-
Pediatric pineal germinomas: Epigenetic and genomic approach (comparative genomic hybridization)
comparative genomic hybridization by array
Homo sapiens
2
26/11/2016
-
121
-
Left ventricle transcriptomic analysis reveals the initial decline in VO2peak from its lifetime apex associates with connective tissue accumulation
RNA-seq of coding RNA
Rattus norvegicus
37
25/11/2016
-
ENA
136
-
Coronary artery disease-associated genotype data in Mediterranean populations
genotyping by array
Homo sapiens
1696
24/11/2016
-
178
-
Transcriptional profiles of primary macrophages incubated with the F-MLV env124-138-env548-567 and env124-138-env548-567:E561R/A567F peptides
RNA-seq of coding RNA
Mus musculus
6
24/11/2016
-
ENA
145
-
4SU-iCLIP of PTBP1 from HEK293 cells
CLIP-seq
Homo sapiens
4
24/11/2016
-
ENA
188
-
Modified iCLIP sequencing of HeLa cells with antibody PTBP1 - excluded dephosphorylation step
CLIP-seq
Homo sapiens
1
24/11/2016
-
ENA
156
-
Modified iCLIP sequencing of HeLa cells with antibody eIF4A3 - additional 5' adapter ligation
CLIP-seq
Homo sapiens
2
24/11/2016
-
ENA
188
-
eIFA3 - iCLIP
CLIP-seq
Homo sapiens
2
24/11/2016
-
ENA
158
-
hMeDIP-seq of mouse intestinal stem and differentiated cells
MeDIP-seq
Mus musculus
6
23/11/2016
ENA
186
-
INTERLEUKIN 15-DEPENDENT T CELL-LIKE INNATE INTRAEPITHELIAL LYMPHOCYTES DEVELOP IN THE INTESTINE AND TRANSFORM INTO LYMPHOMAS IN CELIAC DISEASE
transcription profiling by array
Homo sapiens
9
23/11/2016
-
172
-
Meningeal cells contribute to postnatal cortical neurogenesis
RNA-seq of coding RNA
Mus musculus
14
23/11/2016
-
ENA
171
-
Transcriptomes of triple negative breast cancer enriched breast cancer cohort
transcription profiling by array
Homo sapiens
177
21/11/2016
-
482
-
Investigation of gene expression in biopsies from psoriasis patients before and after adalimumab treatment. Paired biopsies from non-lesional and lesional before treatment start and from psoriatic skin four and 14 days treatment start were included
transcription profiling by array
Homo sapiens
35
21/11/2016
262
Bulk segregant sequencing (Bulk-Seq) analysis to identify paternal suppressors of medea in Arabidopsis thaliana
genotyping by high throughput sequencing
Arabidopsis thaliana
6
18/11/2016
-
ENA
230
-
RNA-seq of Drosophila embryos with P218 mutation in the faint sausage (fas) gene against wild-type controls to study the role fo fas in pre-mRNA splicing during embryogenesis
RNA-seq of coding RNA
Drosophila melanogaster
6
18/11/2016
-
ENA
189
Endothelial inhibition of the glycolytic activator PFKFB3 induces tumor vessel normalization, impairs metastasis and improves chemotherapy
RNA-seq of coding RNA
Mus musculus
8
17/11/2016
-
ENA
321
RIP-seq analysis of Isw1 interacting transcripts
RIP-seq
Saccharomyces cerevisiae
18
17/11/2016
-
ENA
173
-
Time-course expression QTL atlas of the global transcriptional response of wheat to Fusarium graminearum
transcription profiling by array
Triticum aestivum
397
16/11/2016
-
201
-
BioCAP-Seq analysis of human chromosome 21 after its passage through either the mouse male germline
methylation profiling by high throughput sequencing
Mus musculus
6
16/11/2016
-
ENA
194
-
Chip-Seq analysis of human chromosome 21 after its passage through either the female or male mouse germline
ChIP-seq
Mus musculus
73
16/11/2016
-
ENA
208
-
RNA-Seq in liver of Tc1 mice carrying human chromosome 21 passaged through either the female or male germline
RNA-seq of coding RNA
Mus musculus
8
16/11/2016
-
ENA
168
-
RNA-seq of whole blood samples from human visceral leishmaniasis compared to samples from healthy uninfected controls
RNA-seq of coding RNA
Homo sapiens
8
16/11/2016
-
ENA
242
Genotyping by array of amniotic fluid sample from a fetus with developmental abnormalities to detect copy number variations
genotyping by array
Homo sapiens
2
16/11/2016
-
171
-
Indentification of Dis3L2 targets in Drosophila melanogaster wing imaginal discs
RNA-seq of coding RNA
Drosophila melanogaster
6
16/11/2016
-
ENA
160
-
Gene expression profile of experimentally Deformed wing virus (DWV)-infected honey bees: Naive control vs. DWV-infected pupae
transcription profiling by array
Apis mellifera
4
15/11/2016
-
222
-
Potato tuber gene expression during spraing formation in response to Tobacco rattle virus infection
transcription profiling by array
Solanum tuberosum
12
15/11/2016
-
142
-
Transcription profiling by array of pig intestinal cells exposed to Zearalenone or E. coli contamination
transcription profiling by array
Sus scrofa
11
15/11/2016
-
155
-
Experiment to determine the effect of deleting the Rv1675c gene on the transcriptome of Mycobacterium tuberculosis
transcription profiling by array
Mycobacterium tuberculosis
12
15/11/2016
-
165
-
Transcriptional profiling of mammary gland and spleen from Mycoplasma agalactiae infected sheep
RNA-seq of coding RNA
Ovis aries
24
14/11/2016
-
ENA
171
ChIP-sequencing of Streptomyces albus S4 WT and fscRI
ChIP-seq
Streptomyces albus
5
14/11/2016
-
ENA
162
-
microRNA profiling by array of PDGF-alpha overexpression in HUVECs and a human melanoma cell line
microRNA profiling by array
Homo sapiens
12
14/11/2016
-
191
-
Transcription profiling by array of PDGF-alpha overexpression in HUVECs and a human melanoma cell line
transcription profiling by array
Homo sapiens
12
14/11/2016
-
185
-
Profiling of circulating microRNAs in blood of patents with liver cirrhosis or hepatocellular carcinoma
transcription profiling by array
Homo sapiens
23
14/11/2016
-
247
-
Non-Replicating Mycobacterium tuberculosis Elicits a Reduced Infectivity Profile with Corresponding Modifications to the Cell Wall and Extracellular Matrix
transcription profiling by array
Mycobacterium tuberculosis
38
14/11/2016
-
159
-
Blood mRNA profiling to support prognosis of disease severity in respiratory syncytial virus infected infants
transcription profiling by array
Homo sapiens
64
11/11/2016
-
243
-
Genome-wide profiling of Glucocorticoid receptor binding in A549, Nalm-6, MEF WT and MEF GCN5/PCAF double knockout (ChIP-seq)
ChIP-seq
Homo sapiens, Mus musculus
8
10/11/2016
ENA
198
-
Whole-genome expression analysis in IFNgamma stimulated bone marrow-derived macrophages from transgenic mice expressing only non-nuclear mutant Socs1
transcription profiling by array
Mus musculus
8
10/11/2016
157
-
Transcription profiling by array of CD4+ tumor infiltrating CD146+ and CD146- T-lymphocytes from three renal carcinoma patients
transcription profiling by array
Homo sapiens
6
10/11/2016
-
214
-
Trim24 ChIP-seq in embryonic stem (ES) cells grown by 2i+LIF (2iL) and serum media
ChIP-seq
Mus musculus
1
08/11/2016
-
ENA
280
-
Transcription profiling by array of human primary astrocytes, cancer stem cells derived from astrocytes overexpressing various oncogenic and iPSC-inducing factors, glioma stem cells and gliblastomat cell line to compare their expression profiles and tumor-initiating capabilities
transcription profiling by array
Homo sapiens
15
07/11/2016
-
343
iCLIP transcriptome-wide mapping of UNR (CSDE1) binding sites
CLIP-seq
Homo sapiens
4
07/11/2016
ENA
213
-
Ribosome profiling of UNR (CSDE1) shRNA knockdown in SK-MEL-103 melanocytes
translation profiling
Homo sapiens
6
07/11/2016
-
219
-
Transcription profiling by high throughput sequencing of a bZIP29 dominant negative repressor line in root tips of Arabidopsis
RNA-seq of coding RNA
Arabidopsis thaliana
6
07/11/2016
ENA
289
Gene expression profiling of colon mucosa after cytotoxic insult in wild type and Apc-mutated rats: possible relation with resistance to apoptosis during carcinogenesis
transcription profiling by array
Rattus norvegicus
8
03/11/2016
-
220
-
Urinary exosomal miRNA signatures in type II diabetic nephropathy patients
microRNA profiling by array
Homo sapiens
24
03/11/2016
-
298
-
Biomarkers of hippocampal gene expression in a mouse restraint chronic stress model
transcription profiling by array
Mus musculus
24
02/11/2016
-
257
-
Genotyping by array of human primary acute myeloid leukemia cells on the Affymetrix 6.0 SNP array to evaluate prognostic relevance
genotyping by array
Homo sapiens
227
02/11/2016
-
323
-
Copy-number variation (CNV) study of glioblastoma parental tumors and paired patient derived cell lines (PDCLs) to study the extent PDCLs recapitulates the genome landscape of parental tumor
comparative genomic hybridization by array
Homo sapiens
20
01/11/2016
-
311
-
Transcription profiling by array of nine pairs of Glioblastoma tumors and paired patient derived cell lines (PDCLs) to study the extent to which PDCLs recapitulates the genome landscape of parental tumors
transcription profiling by array
Homo sapiens
18
01/11/2016
-
312
-
Single-cell RNA sequencing of spleen-derived LCK-expressing cells from adult zebrafish
RNA-seq of coding RNA from single cells
Danio rerio
864
01/11/2016
ENA
464
-
Transcription profiling by array of Schizosaccharomyces pombe 972 h- treated with antimycin
transcription profiling by array
Schizosaccharomyces pombe
3
01/11/2016
-
212
-
transcription profiling by array of fission yeast during adaptation to respiratory medium
transcription profiling by array
Schizosaccharomyces pombe
14
01/11/2016
-
220
-
Transcription profiling of patient-derived acute myeloid leukemia cells to study the association of UNCX expression with proliferation and differentiation of myeloid cells
transcription profiling by array
Homo sapiens
6
01/11/2016
-
234
-
Transcriptional profiling by array of Arabidopsis thaliana closed floral buds from young primary inflorescences of wild type (Ws-3) and DRINK ME (AT2G21230) overexpression line
transcription profiling by array
Arabidopsis thaliana
2
01/11/2016
-
218
-
MicroRNA expression profiling of normal and glioblastoma-derived neural stem cells
microRNA profiling by array
Homo sapiens
38
01/11/2016
-
329
-
Treatment of non-CML CD34+ cells with EZH2 inhibitor GSK343
transcription profiling by array
Homo sapiens
6
01/11/2016
-
229
-
miRNASeq of musculoskeletal ageing using human mesenchymal stem cells and their tissue constructs
RNA-seq of non coding RNA
Homo sapiens
30
01/11/2016
-
ENA
308
-
Treatment of CML CD34+ cells with EZH2 inhibitor GSK343
transcription profiling by array
Homo sapiens
6
01/11/2016
-
229
-
Transcription profiling by array of involution day 2 mammary glands in Rac1 knockout and wild type mice
transcription profiling by array
Mus musculus
6
31/10/2016
-
208
A PP2A-Pab1-mediated crosstalk between TORC1 & TORC2 regulates the differentiation response in fission yeast
RNA-seq of coding RNA
Schizosaccharomyces pombe
18
31/10/2016
-
ENA
206
A systems toxicology analysis in ApoE knockout mice
transcription profiling by array
Mus musculus
167
31/10/2016
226
-
Transcriptional profiling by polyA+ or total RNA sequencing of UNR (CSDE1) knockdown in SK-MEL-103 melanocytes
RNA-seq of coding RNA
Homo sapiens
8
31/10/2016
-
256
-
Deep Mutational Scanning of HIV tat and rev in a non-overlapped context
DNA-seq
HIV-1 vector pNL4-3
606
30/10/2016
ENA
181
-
Leveraging cell type-specific regulatory regions to detect SNPs associated with tissue factor pathway inhibitor plasma levels
ChIP-seq
Homo sapiens
4
30/10/2016
-
ENA
160
-
RNA-seq for miRNAs in fibrocyte-adipocyte progenitors (FAPs) or myogenic progenitors (MPs) during muscle regeneration
microRNA profiling by high throughput sequencing
Mus musculus
4
29/10/2016
ENA
159
-
3prime RNA-seq of human prostate cancer cell line DU-145 treated with Senexin A
RNA-seq of coding RNA
Homo sapiens
6
28/10/2016
-
ENA
230
-
Blood transcriptomic diagnosis of active tuberculosis and discrimination from other febrile illnesses
transcription profiling by array
Homo sapiens
114
28/10/2016
287
-
RNA-Sequencing of Candida albicans that were engineered to mistranslate the CUG codon at constitutively elevated levels, in the presence and absence of the antifungal drug fluconazole, SYBARIS project
DNA-seq
Candida albicans
6
27/10/2016
-
ENA
184
-
Microarray profiling of polyploid macrophage progeny
transcription profiling by array
Mus musculus
20
27/10/2016
-
168
Detection of potential neuroprotective changes at the molecular, anatomical and physiological level in identified human pyramidal cells in response to brain edema and increased intracranial pressure
transcription profiling by array
Homo sapiens
27
27/10/2016
-
165
ERN1 and ALPK1 inhibit differentiation of bi-potential tumor-initiating cells in human breast cancer
transcription profiling by array
Homo sapiens
12
27/10/2016
-
59
-
Impact of miRNA Levels, Target-Site Complementarity and Cooperativity on ceRNA-Regulated Gene Expression
RNA-seq of coding RNA, RNA-seq of non coding RNA
Mus musculus
67
27/10/2016
-
208
-
DNA demethylation by Tet dioxygenases controls gastrula patterning by regulating Lefty-Nodal signaling
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Mus musculus
20
27/10/2016
-
148
-
Study on miRNA expression pattern in Aging Mouse Hippocampal Neurons
RNA-seq of non coding RNA
Mus musculus
3
27/10/2016
-
150
-
RNA-seq analysis of S. pneumoniae Pn-STP (PhpP) mutants
RNA-seq of coding RNA
Streptococcus pneumoniae
4
27/10/2016
-
110
-
DNA methylation variation of human-specific Alu repeats
methylation profiling by high throughput sequencing
Homo sapiens
3
27/10/2016
-
174
-
Comprehensive transcriptome analysis of phytohormone pathway genes and miRNAs in ABA initiated strawberry receptacle ripening
other, RNA-seq of coding RNA, RNA-seq of non coding RNA
Fragaria x ananassa
21
27/10/2016
-
-
71
-
Tracing Enhancer Networks using Epigenetic Traits (TENET)
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
29
26/10/2016
ENA
271
-
The role of unliganded thyroid hormone receptors (TRs) in human adipose derived stem cells (hADSC)
transcription profiling by array
Homo sapiens
12
26/10/2016
-
126
-
The role of thyroid hormone receptors (TRs) in human adipose derived stem cells (hADSC), isolated from human adipose tissue collected during liposuction procedures
transcription profiling by array
Homo sapiens
24
26/10/2016
-
126
-
Overexpression of PHF8 promotes an EMT-related gene signature in MCF10A cells
RNA-seq of coding RNA
Homo sapiens
16
26/10/2016
-
ENA
139
-
Response of Arabidopsis roots to combinations of nitrogen and hormonal signals
transcription profiling by array
Arabidopsis thaliana
64
26/10/2016
175
-
Genomic profiling of patient-derived xenografts identify high level “passenger” gene aberrations associated with better prognosis in non-small cell lung cancer
transcription profiling by array
Mus musculus
36
26/10/2016
-
214
-
Global miRNA expression profile of head and neck squamous cell carcinoma patients with resistant and sensitive tumors
microRNA profiling by array
Homo sapiens
15
25/10/2016
-
205
-
EcR recruits and stimulates dMi-2 remodeling activity to constrain transcription of hormone-regulated genes
ChIP-seq
Drosophila melanogaster
4
25/10/2016
-
ENA
175
-
Tuning the transcriptional response to hypoxia through HIF prolyl- and asparaginyl-hydroxylase inhibition:Sequencing Data
RNA-seq of coding RNA
Homo sapiens
12
25/10/2016
-
ENA
179
-
ChIP-seq analysis of human neuroblastoma cell lines
ChIP-seq
Homo sapiens
17
25/10/2016
ENA
284
-
Transcription profiling by array of mouse intestinal epithelial spheroid-derived stem cells, wound-associated epithelial cells and enterocytes
transcription profiling by array
Mus musculus
12
25/10/2016
194
-
Transcriptome analysis of IEC4.1 cells in response to TNFα stimulation
transcription profiling by array
Mus musculus
12
25/10/2016
-
122
-
Transcriptome profiles of Huh7.5.1-NTCP cells treated with HBV preS1 peptide
transcription profiling by array
Homo sapiens
6
25/10/2016
-
161
-
H3K4me1 ChIP-seq in murine pro-B cells
ChIP-seq
Mus musculus
2
25/10/2016
ENA
121
-
Promiscuous targeting of bromodomains by Bromosporine identifies BET proteins as master regulators of primary transcription response in leukemia
transcription profiling by array
Homo sapiens
78
25/10/2016
-
163
-
Promiscuous targeting of bromodomains by Bromosporine identifies BET proteins as master regulators of primary transcription response in leukemia [set2]
transcription profiling by array
Homo sapiens
42
25/10/2016
-
137
-
Promiscuous targeting of bromodomains by Bromosporine identifies BET proteins as master regulators of primary transcription response in leukemia [set 1]
transcription profiling by array
Homo sapiens
36
25/10/2016
-
148
-
Modeling the ESR1 tyrosine 537 mutation with CRISPR-Cas9 for mechanistic studies and evaluation of therapeutic approaches for metastatic breast cancer
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
17
25/10/2016
-
165
-
Modeling the ESR1 tyrosine 537 mutation with CRISPR-Cas9 for mechanistic studies and evaluation of therapeutic approaches for metastatic breast cancer [RNA-Seq]
RNA-seq of coding RNA
Homo sapiens
11
25/10/2016
-
ENA
184
-
Modeling the ESR1 tyrosine 537 mutation with CRISPR-Cas9 for mechanistic studies and evaluation of therapeutic approaches for metastatic breast cancer [ChIP-Seq]
ChIP-seq
Homo sapiens
6
25/10/2016
ENA
148
-
Blood transcription profiling of infections of humans with Leishmania infantum
transcription profiling by array
Homo sapiens
45
25/10/2016
-
117
-
Antigen specific human conventional T cells (CD154+) or regulatory T cells (CD137+) directed agains A. fumigatus or Birch pollen lysate isolated from Birch pollen allergic patients or healthy controls
transcription profiling by array
Homo sapiens
42
25/10/2016
100
-
Transcriptional profiling of newly generated dentate granule cells using TU-tagging reveals pattern shifts in gene expression during circuit integration
RNA-seq of coding RNA
Mus musculus
10
25/10/2016
-
ENA
95
-
Multiparameter functional diversity of human C2H2 zinc finger proteins
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
252
25/10/2016
-
190
-
Multiparameter functional diversity of human C2H2 zinc finger proteins [RNA-Seq]
RNA-seq of coding RNA
Homo sapiens
92
25/10/2016
ENA
193
-
Identification of in vivo binding sites of human GFP-tagged C2H2-ZF proteins
ChIP-seq
Homo sapiens
160
25/10/2016
ENA
195
-
Pan-cancer transcriptomic analysis associates long non-coding RNAs with key mutational driver events
RNA-seq of coding RNA
Homo sapiens
8
25/10/2016
-
181
-
Developing gene signature against Mycobacterium bovis infection in Cattle
transcription profiling by array
Bos indicus, Bos primigenius, Bos taurus, Bubalus bubalis
8
25/10/2016
107
-
Direct regulation of alternative splicing by SMAD3 through interaction with PCBP1 is essential for the tumor-promoting role of TGF-beta
RNA-seq of coding RNA
Homo sapiens
18
25/10/2016
-
-
82
-
RNA sequencing of hiPSC derived neural crest populations from Familial Dysautonomia patients
RNA-seq of coding RNA
Homo sapiens
6
25/10/2016
-
ENA
130
-
Comparison of gene expression between Human umbilical vein endothelial cells and Human liver sinusoidal endothelial cells
transcription profiling by array
Homo sapiens
8
24/10/2016
154
-
RNA-Seq of Kidney Glomeruli from Type 2 diabetic (db/db) and non-diabetic mice
RNA-seq of coding RNA
Mus musculus
6
24/10/2016
ENA
104
-
Genome wide map of long noncoding RNA Tug1 binding sites in cultured mouse podocytes
ChIP-seq
Mus musculus
6
24/10/2016
ENA
98
-
FOXA and master transcription factors recruit Mediator and Cohesin to the core transcriptional regulatory circuitry of cancer cells
ChIP-seq
Homo sapiens
26
24/10/2016
-
184
-
Developmental gene expression of Hymenochirus boettgeri
RNA-seq of coding RNA
Hymenochirus boettgeri
8
24/10/2016
-
-
61
-
RNA-seq of brain mural cells and microvascular fragments
RNA-seq of coding RNA
Mus musculus
6
24/10/2016
-
136
-
Analysis of Fusarium verticillioides gene expression in response to 2-benzoxazolinone (BOA)
transcription profiling by array
Fusarium verticillioides
4
24/10/2016
93
-
Developmental gene expression of Xenopus laevis J strain
RNA-seq of coding RNA
Xenopus laevis
56
24/10/2016
-
-
82
-
Developmental gene expression of Xenopus laevis J strain [stage]
RNA-seq of coding RNA
Xenopus laevis
28
24/10/2016
-
-
60
-
Tissue gene expression of Xenopus laevis J strain [tissue]
RNA-seq of coding RNA
Xenopus laevis
28
24/10/2016
-
-
72
-
Transcription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
RNA-seq of coding RNA
Arabidopsis thaliana
12
24/10/2016
-
ENA
231
Identification of a macrophage PPARγ-GDF3 regulatory axis controlling muscle regeneration
transcription profiling by array
Mus musculus
44
24/10/2016
119
-
Long non-coding RNA produced by RNA polymerase V determines boundaries of heterochromatin
RNA-seq of coding RNA
Arabidopsis thaliana
9
24/10/2016
-
-
63
-
Large-scale epigenetic reprogramming is punctuated late during the evolution of pancreatic cancer progression [ChIP-Seq]
ChIP-seq
Homo sapiens
41
24/10/2016
-
136
-
Large-scale epigenetic reprogramming is punctuated late during the evolution of pancreatic cancer progression [RNA-Seq]
RNA-seq of coding RNA
Homo sapiens
8
24/10/2016
-
-
156
-
Large-scale epigenetic reprogramming is punctuated late during the evolution of pancreatic cancer progression [BS-Seq]
methylation profiling by high throughput sequencing
Homo sapiens
11
24/10/2016
-
117
-
Differences in genome-wide gene expression response in PBMCs between young and old men upon caloric restriction
transcription profiling by array
Homo sapiens
38
24/10/2016
148
-
Hepatic expression data from 2-stage carcinogenesis study in rats
transcription profiling by array
Rattus norvegicus
62
24/10/2016
118
-
Distinct small RNA populations act antagonistically in formation of heterosis
RNA-seq of non coding RNA
Zea mays
31
24/10/2016
-
-
77
-
Transcriptome profiling at neural tube closure site
RNA-seq of coding RNA
Mus musculus
8
24/10/2016
-
117
-
Gene expression in the tail tissue of tadpoles [Rana pirica] by larvae salamander or dragon fly
transcription profiling by array
Rana pirica
14
24/10/2016
105
-
Heterogeneity in early lymphoid compartments [qPCR]
transcription profiling by RT-PCR
Mus musculus
384
23/10/2016
-
114
-
Photomorphogenesis of Arabidopsis seedlings is accompanied by complex alternative splicing alterations
RNA-seq of coding RNA
Arabidopsis thaliana
22
23/10/2016
-
-
71
-
Large-scale epigenetic reprogramming is punctuated late during the evolution of pancreatic cancer progression
ChIP-seq, methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Homo sapiens
60
23/10/2016
-
201
-
The transcriptional profile of human CD8+ lung resident memory T-cells
transcription profiling by array
Homo sapiens
28
23/10/2016
-
162
-
MicroRNA-769-3p down-regulated NDRG1 and enhanced apoptosis in MCF-7 during reoxygenation
transcription profiling by array
Homo sapiens
12
23/10/2016
207
-
Developmental heterogeneity of cardiac fibroblasts does not predict pathological proliferation and activation
RNA-seq of coding RNA
Mus musculus
6
23/10/2016
-
128
-
RNA-seq analysis of cell-line models for monocyte to macrophage transformation: Project 3 of Open Targets - Epigenomes of Cell Lines
RNA-seq of coding RNA
Homo sapiens
24
22/10/2016
-
ENA
316
-
The effect of short-term cold treatment in wheat
transcription profiling by array
Triticum aestivum
8
22/10/2016
-
175
-
Nuclear TIGAR mediates an epigenetic-metabolic loop via Nrf2 for cancer therapeutics resistance
RNA-seq of coding RNA
Homo sapiens
4
22/10/2016
ENA
181
-
Overcoming acquired resistance to BIBW2992 in HCC827, a non-small cell lung cancer cell line by dasatinib
transcription profiling by array
Homo sapiens
3
22/10/2016
-
154
-
Expression data from BNL CL.2 liver cells when cultured with iron, RAW 264.7 macrophages or both
transcription profiling by array
Mus musculus
12
22/10/2016
143
-
Ribosome footprinting upon oxidative stress treatment for wild-type and catalase2 knock-out mutants
RNA-seq of coding RNA
Arabidopsis thaliana
4
21/10/2016
-
ENA
212
-
Transcription profiling by array of trichostatin-A treated gastric cancer cell lines
transcription profiling by array
Homo sapiens
12
21/10/2016
-
243
Transcription profiling of the Arabidopsis tic56-1 import mutant line compared to wild type plants
transcription profiling by array
Arabidopsis thaliana
8
21/10/2016
-
109
-
MOF acetyl transferase regulates transcription and respiration in mitochondria
RNA-seq of coding RNA
Homo sapiens, Mus musculus
19
21/10/2016
-
ENA
145
-
Nanostring nCounter expression analysis of sea lamprey embryos and adult testes (Petromyzon marinus)
transcription profiling by array
Petromyzon marinus
21
21/10/2016
-
102
-
Gene expression data of human mesenchymal stromal cells, fibroblasts and hematopoietic progenitors
transcription profiling by array
Homo sapiens
15
21/10/2016
125
-
Maintenance of Leukemic Cell Identity by the Activity of the Polycomb Complex PRC1
ChIP-seq, RNA-seq of coding RNA
Mus musculus
20
21/10/2016
-
113
-
Maintenance of Leukemic Cell Identity by the Activity of the Polycomb Complex PRC1 (RNA-seq)
RNA-seq of coding RNA
Mus musculus
8
21/10/2016
-
ENA
119
-
Maintenance of Leukemic Cell Identity by the Activity of the Polycomb Complex PRC1 (ChIP-seq)
ChIP-seq
Mus musculus
5
21/10/2016
ENA
124
-
Liver expression data from four mouse strains treated with vehicle or PF-04287881 for seven days
transcription profiling by array
Mus musculus
31
21/10/2016
102
-
RNA sequencing of microglia sorted form tamoxifen treated Sall1CreER/fl and control Sall1fl/fl mice
RNA-seq of coding RNA
Mus musculus
7
19/10/2016
ENA
369
Study of the host response to an influenza virus infection in a mouse model
transcription profiling by array
Mus musculus
3
19/10/2016
-
147
-
RNA-Seq of human embryonic stem cells over expressing NANOS3 and DAZL
RNA-seq of coding RNA
Homo sapiens
9
19/10/2016
ENA
148
Notch targets stem-cell and temporal-programming genes to orchestrate neuroblast tumours
transcription profiling by array
Drosophila melanogaster
8
18/10/2016
-
133
-
Transcription profiling of immature and LPS-matured dendritic cells, sorted for DC-S and DC-L phenotypes
transcription profiling by array
Homo sapiens
4
17/10/2016
-
177
-
Wuschel Related Homeobox 5 (WOX5) induced overexpression in seedling roots of Arabidopsis thaliana
transcription profiling by array
Arabidopsis thaliana
12
16/10/2016
-
173
-
Separated transcriptome analysis of microglial cells and oligodendrocytes in the brain of P4 rats, in intra-uterine growth restriction or control conditions
transcription profiling by array
Rattus norvegicus
12
14/10/2016
-
157
-
Transcription profiling of rat brain at post-natal day 4 and 10 after protein restriction of the mother regimen during gestation
transcription profiling by array
Rattus norvegicus
12
14/10/2016
-
158
-
Transcription profiling by array of the uteruses and placentas of 66H Ch13 and C57B6/J mice
transcription profiling by array
Mus musculus, Mus musculus x Mus spretus
4
14/10/2016
148
-
Genotyping by array: Human Developmental Biology Resource (HDBR) expression resource of prenatal human brain development-SNP data
genotyping by array
Homo sapiens
425
12/10/2016
-
511
-
RNA-seq of coding RNA: Human Developmental Biology Resource (HDBR) expression resource of prenatal human brain development
RNA-seq of coding RNA
Homo sapiens
650
12/10/2016
-
ENA
1532
Transcription profiling by array of human acute lymphoblastic leukemia and normal haemopoietic samples using Agilent Whole Human Genome Oligo Microarrays
transcription profiling by array
Homo sapiens
60
12/10/2016
-
300
Transcriptional profiling of a flpS knock-out strain of Steptococcus suis strain 10
transcription profiling by array
Streptococcus suis
4
11/10/2016
170
-
Copy number variation analysis of Kasumi-1 acute myeloid leukemia cells, U2OS osteosarcoma cells and acute myeloid leukemia cells isolated from a patient
genotyping by array
Homo sapiens
3
10/10/2016
-
123
-
Transcription profiling by array of human endothelial cells from colorectal carcinoma biopsies with high and low GBP-1 expression
transcription profiling by array
Homo sapiens
16
10/10/2016
-
280
-
Identification of Rx2 binding loci in medaka by iDamID-seq
ChIP-seq
Oryzias latipes
4
06/10/2016
-
ENA
204
-
Osteoblasts secrete miRNA-containing extracellular vesicles that enhance expansion of human umbilical cord blood cells
microRNA profiling by high-throughput sequencing
Homo sapiens
2
05/10/2016
-
200
-
Transcriptional effects of a 6h treatment with 2% isoflurane in the anterior cingulate cortex of the 24h old neonatal piglet brain
transcription profiling by array
Sus scrofa
11
04/10/2016
-
224
-
Microarray analysis of gene expression in Rabgef1-knockout and control mouse skin
transcription profiling by array
Mus musculus
4
04/10/2016
-
244
-
Transcription profiling by array of rotenone treated olfactory cells derived from patients with Parkinson’s disease and healthy controls
transcription profiling by array
Homo sapiens
32
04/10/2016
395
-
Transcriptional profiling of wild-type parent MC58 strain and ptsH knock-out mutant in Neisseria meningitidis
transcription profiling by array
Neisseria meningitidis MC58
3
03/10/2016
197
-
Transcription profiling by array of vitamin D modulation of innate immune signalling in Dendritic Cells
transcription profiling by array
Homo sapiens
9
03/10/2016
297
-
ChIP-seq analysis of H3K9me3 levels across the genome for one copy of H3K9M mutant in pombe
ChIP-seq
Schizosaccharomyces pombe
6
03/10/2016
ENA
224
-
Genotyping by array of an esophageal adenocarcinoma cell line, tumour tissue, normal tissue and blood derived from the same patient
genotyping by array
Homo sapiens
5
03/10/2016
243
-