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AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
RNA sequencing of CD45-negative cells isolated from CNS and lung of GM-CSFind x CD4-CreERT2 and control mice
RNA-seq of coding RNA
Mus musculus
15
Today
ENA
-
-
Differential analysis of GM-CSF-induced inflammatory monocyte-derived cells (MCs) isolated from various organs
RNA-seq of coding RNA
Mus musculus
15
Today
ENA
-
-
ChIP-seq analysis identifies p27(Kip1)-target genes involved in cell adhesion and cell signalling in mouse embryonic fibroblasts
ChIP-seq
Mus musculus
2
Today
ENA
-
-
RNA sequencing data of bone marrow endothelial cell subpopulations type H, type E and type L
RNA-seq of coding RNA
Mus musculus
9
Yesterday
-
ENA
53
-
Rare tumor cell isolation and genomic variation detection in pleural effusion samples from lung cancer patients
DNA-seq
Homo sapiens
6
17/02/2017
-
ENA
82
-
Transcription profiling by array of mouse neural stem cells following CRISPR/Cas9 knockdown of Disp3
transcription profiling by array
Mus musculus
11
17/02/2017
21
-
Transcription profiling by array of Drosophila melanogaster park25 (parkin) and pink1 (Pink1) mutants to identify neuron-specific transcriptional changes that may be relevant to Parkinson's disease
transcription profiling by array
Drosophila melanogaster
36
17/02/2017
-
31
-
RNA-seq of human and mouse stem-cell derived neurons and mouse primary cortical neurons after KCl-induced membrane depolarization against controls
RNA-seq of coding RNA
Homo sapiens, Mus musculus
30
16/02/2017
-
ENA
51
-
Type I interferon-regulated gene expression and signaling in murine mixed glial cells lacking signal transducers and activators of transcription 1or 2 or interferon regulatory factor 9
transcription profiling by array
Mus musculus
32
15/02/2017
63
-
Response of Candida albicans to taurocholate
transcription profiling by array
Candida albicans
4
15/02/2017
-
27
-
Transcription profiling by high throughput sequencing of Medicago truncatula hairy root lines overexpressing TSAR1 or TSAR2
RNA-seq of coding RNA
Medicago truncatula
9
15/02/2017
-
ENA
151
-
Transcriptional profilling of female mice liver as a function of age
transcription profiling by array
Mus musculus
60
15/02/2017
25
-
Methylation profiling of ten breast cancer cell lines to identify new targets for basal-like breast cancers
methylation profiling by high throughput sequencing
Homo sapiens
10
14/02/2017
-
ENA
56
-
RNASeq of ten human breast cancer cell lines
RNA-seq of coding RNA
Homo sapiens
10
14/02/2017
-
ENA
42
-
MicroRNA sequencing of human serum exosomes from women with different age and hormonal status
microRNA profiling by high throughput sequencing
Homo sapiens
31
14/02/2017
-
ENA
27
-
Transcriptome sequencing of bloodstream form Trypanosoma brucei expressing VSG121
RNA-seq of coding RNA
Trypanosoma brucei
1
12/02/2017
-
ENA
44
-
RNA-seq analysis of budding yeast wild type (BY4741) and prp45(1-169) mutant
RNA-seq of coding RNA
Saccharomyces cerevisiae
4
10/02/2017
-
ENA
66
-
Transcription profiling of Brassica nigra challenged by ozone, Pieris brassicae, or both ozone followed by P. brassicae feeding
transcription profiling by array
Brassica nigra
17
10/02/2017
-
83
-
Time series RNA-seq of temperature-entrained and light-entrained bloodstream and procyclic form Trypanosoma brucei cultures
RNA-seq of coding RNA
Trypanosoma brucei
78
10/02/2017
-
ENA
52
-
Transcription profiling by array of human CD138 purified bone marrow plasma cells from patients with multiple myeloma
transcription profiling by array
Homo sapiens
630
09/02/2017
-
97
-
Transcription profiling by array of human CD138 purified bone marrow plasma cells from relapsed multiple myeloma patients
transcription profiling by array
Homo sapiens
82
09/02/2017
-
84
-
Microarray data of foetal liver Lin- cKit+ cells obtained from Fh1-deficient and control 14.5 dpc mouse embryos
transcription profiling by array
Mus musculus
7
08/02/2017
-
78
-
Transcriptional profiling of calyx abscission zone cells of citrus fruits and adjacent fruit rind cells during ethylene-promoted fruit abscission
transcription profiling by array
Citrus sinensis
18
08/02/2017
-
53
-
miRNA profiling in leaf and cork tissues of Q. suber reveals novel miRNAs and tissue-specific expression patterns
microRNA profiling by high throughput sequencing
Quercus suber
2
07/02/2017
-
-
-
Transcription profiling by microarray of barley mutant (G132) and its wild type (Hordeum vulgare cv. Graphic) under high CO2 concentration
transcription profiling by array
Hordeum vulgare
24
07/02/2017
101
-
Microarray time course transcriptional profiling of Human CD4+ T Cell activation across 20 donors
transcription profiling by array
Homo sapiens
137
06/02/2017
-
92
-
Distinct and sexually dimorphic X dosage compensation states in the mammalian germline
RNA-seq of coding RNA
Mus musculus
184
06/02/2017
ENA
123
-
Transcription profiling by array of IDH1 mutant and wild type human glioblastoma samples
transcription profiling by array
Homo sapiens
52
05/02/2017
-
105
-
Altered expression of maize PLASTOCHRON1 enhances biomass and seed yield by extending cell division duration
RNA-seq of coding RNA
Zea mays
12
04/02/2017
-
ENA
86
-
Whole genome sequencing of spontaneous tumors arising in mice as a result of centrosome amplification
whole chromosome random sequencing
Mus musculus
14
04/02/2017
-
ENA
93
-
Expression profiling of budding cells in colorectal cancer suggests an EMT-like phenotype and molecular subtype switching
RNA-seq of coding RNA
Homo sapiens
16
04/02/2017
-
ENA
97
-
Genome-Wide Identification of the FRS12 Binding Sites by Tandem Chromatin Affinity Purification – Seq Analysis in Arabidopsis thaliana
ChIP-seq
Arabidopsis thaliana
3
04/02/2017
-
ENA
75
-
RNA-seq of coding RNA to identify genes regulated by FRS12 at night time in Arabidopsis thaliana
RNA-seq of coding RNA
Arabidopsis thaliana
6
04/02/2017
-
ENA
75
-
GRO-seq analysis U1810 cells after 8h Rapamycin treatment and DMSO control
GRO-seq
Homo sapiens
2
03/02/2017
-
ENA
69
-
Gene expression profiles in cancer stem cells isolated as ALDHhigh cells from human endometrioid adenocarcinoma cells, HEC-1
transcription profiling by array
Homo sapiens
2
03/02/2017
-
86
-
Effect of CtBP1 knockdown in SCC25 cells
transcription profiling by array
Homo sapiens
6
03/02/2017
-
105
-
RNA sequencing of Geranium pyrenaicum and G. robertianum petioles exposed to 2 or 11.5 hours of control white light or low R:FR light
RNA-seq of coding RNA
Geranium pyrenaicum, Geranium robertianum
24
01/02/2017
ENA
8
-
Novel genes involved in the pathophysiology of gonadotropin-dependent adrenocortical tumorigenesis in mice
transcription profiling by array
Mus musculus
24
01/02/2017
-
96
-
Identification of a tumor suppressor network in T-cell leukemia
genotyping by array
Homo sapiens
8
01/02/2017
-
105
-
The transcriptional signature of ascites-associated macrophages is linked to interferon signaling and a favorable clinical outcome in a subgroup of ovarian carcinoma patients
RNA-seq of coding RNA
Homo sapiens
13
01/02/2017
-
ENA
91
-
Comparison of root transcriptomes in four soybean cultivars with high and low isoflavonoid content
RNA-seq of coding RNA
Glycine max
12
01/02/2017
-
ENA
36
-
RNA-seq in HUVECs overexpressing Sox18 and treated with Sm4
RNA-seq of coding RNA
Homo sapiens
12
01/02/2017
-
ENA
79
-
Sox18 ChIP-seq in HUVECs
ChIP-seq
Homo sapiens
4
01/02/2017
-
ENA
72
-
SOX7 ChIP-seq in HUVECs
ChIP-seq
Homo sapiens
4
01/02/2017
-
ENA
67
-
microRNA profiling by array of human umbilical venous endothelial cells (HUVECs) stimulated with bone morphogenetic protein 4 (BMP4)
microRNA profiling by array
Homo sapiens
12
01/02/2017
57
-
Transcription profiling of DcgA knockout in Dictyostelium discoideum
RNA-seq of coding RNA
Dictyostelium discoideum
8
01/02/2017
-
ENA
70
-
Expression profiling experiment on Pkd1-mutant mice and mice induced with nephrotoxin DCVC
RNA-seq of coding RNA
Mus musculus
21
31/01/2017
ENA
116
-
5-hydroxymethylcytosine (5hmC) methylation profiling of adult mouse brain and liver tissues (hMeDIP-seq)
methylation profiling by high throughput sequencing
Mus musculus
24
31/01/2017
-
ENA
89
-
Expression profiling of adult mouse brain and liver tissues (RNA-seq)
RNA-seq of coding RNA
Mus musculus
24
31/01/2017
-
ENA
89
-
De novo and reference transcriptome assembly of transcripts expressed during flower development provide insight into the seed setting ability of tetraploid red clover (Trifolium pratense L.)
RNA-seq of coding RNA
Trifolium pratense
12
31/01/2017
-
ENA
73
-
Genotyping by array of 73 acute lymphoblastic leukemia samples and their matched control remission samples to characterise somatic events associated with leukemic transformation
genotyping by array
Homo sapiens
146
31/01/2017
-
65
-
192 adult acute lymphoblastic leukemia (ALL) cases characterized on the Affymetrix Human Genome U133 Plus 2.0 Microarray
transcription profiling by array
Homo sapiens
192
31/01/2017
-
63
-
Transcription profiling of breast muscle in heat stressed layer or broiler chicken compared to control temperature
transcription profiling by array
Gallus gallus
32
31/01/2017
-
43
-
Transcriptomic profiling of antigen-specific T cells at the single-cell level after clearance of hepatitis C virus
RNA-seq of coding RNA from single cells
Homo sapiens
72
31/01/2017
-
ENA
65
-
Transcriptomic characterization of the Madin-Darby bovine kidney (MDBK) cells and its comparison with cattle primary cultured hepatocytes
transcription profiling by array
Bos taurus
8
31/01/2017
42
-
Transcriptomic characterization of cattle primary cultured hepatocytes and its comparison with liver tissue
transcription profiling by array
Bos taurus
12
31/01/2017
43
-
Differential Ago-RIP-Seq for the identification of miR-375 targets in prostate cancer cells
RIP-seq
Homo sapiens
18
31/01/2017
-
ENA
49
-
Microarray analysis of the Lysosome-dependent activation of human dendritic cells by the vaccine adjuvant QS-21
transcription profiling by array
Homo sapiens
12
30/01/2017
-
53
-
Methylation profiling by array of human breast cancer cell line MDA-MB-231 with or without transfection of putative tumour suppressor gene ITIH5
methylation profiling by array
Homo sapiens
6
30/01/2017
-
56
-
Effect of estradiol (E2) exposure and KMT2B knockdown on gene expression in MCF-7 cells
transcription profiling by array
Homo sapiens
8
30/01/2017
-
47
-
microRNA profiling of serum microRNA from high grade serous ovarian carcinoma
transcription profiling by array
Homo sapiens
130
30/01/2017
32
-
Whole Genome Analysis of the Heat Stress Response in Commercial Baker's Yeast (Saccharomyces cerevisiae) with Comparative Statistical Approaches
transcription profiling by array
Saccharomyces cerevisiae S288c
12
30/01/2017
37
-
Transcription profiling by array of human MDA-MB-231 breast cancer cell line with or without transfection of putative tumour suppressor gene ITIH5 to study the gene's role in suppressing breast cancer metastatic growth
transcription profiling by array
Homo sapiens
8
30/01/2017
-
49
-
Proteomic profiling of NCI60 cell lines from Cancer Cell Line Encyclopedia
proteomic profiling by mass spectrometer
Homo sapiens
60
27/01/2017
-
106
-
Monitoring global differential gene expression in Corynebacterium glutamicum in response to sigma factor SigD disruption and overexpression
RNA-seq of coding RNA
Corynebacterium glutamicum ATCC 13032
4
27/01/2017
-
ENA
71
-
Whole genome transcription profiling of the JN-DSCRT1 cell line treated with Trabectedin
transcription profiling by array
Homo sapiens
11
27/01/2017
55
-
Microarray analysis revealed novel genes and pathways associated with neonatal unilateral ureteral obstruction
transcription profiling by array
Rattus norvegicus
7
26/01/2017
-
79
-
Transcription profiling of Drosophila expressing mutant Abeta under treatment with lithium
transcription profiling by array
Drosophila melanogaster
14
26/01/2017
-
73
-
Autoantigen microarrays of NZM2328 lupus mice treated with induced CD4+ regulatory T cells or natural CD4+ regulatory T cells
antigen profiling
Mus musculus
24
26/01/2017
-
93
-
RNA-seq of NEAT1 knockdown in neuronal excitability
RNA-seq of coding RNA
Homo sapiens
17
26/01/2017
-
ENA
65
-
hDBR1 OVEREXPRESSED CALU6 AND 293T CELLS VS. CONTROL CELLS
RNA-seq of coding RNA
Homo sapiens
16
25/01/2017
-
ENA
100
-
Transcriptional profiling of a slyA mutant and a slyA-overexpression strain of Escherichia coli MG1655 in order to elucidate the SlyA regulon
transcription profiling by array
Escherichia coli str. K-12 substr. MG1655
16
25/01/2017
-
76
-
Functional link between TFIIB and Mediator
ChIP-seq
Saccharomyces cerevisiae
51
24/01/2017
-
ENA
99
-
Transcription profiling by array of two peritoneal mononuclear phagocyte populations from infection-free peritoneal dialysis patients
transcription profiling by array
Homo sapiens
10
23/01/2017
97
-
Gene expression in soleus muscle of mouse inbred strains LG/J and SM/J
transcription profiling by array
Mus musculus
6
23/01/2017
101
-
Methylation profiling by array of a solitary Peutz-Jeghers colon polyp in a healthy individual
methylation profiling by array
Homo sapiens
1
23/01/2017
-
93
-
Barley transcriptome analyses upon interaction with different aphid species identifies thionins contributing to resistance
transcription profiling by array
Hordeum vulgare
24
23/01/2017
-
100
-
Transcriptome of Sinorhizobium meliloti RNase mutants
transcription profiling by array
Sinorhizobium meliloti
8
21/01/2017
-
115
-
microRNA profiling by array of gemcitabine sensitive BxPC-3 pancreatic cancer cell lines and their derived resistant subclones, Bx-GEM
microRNA profiling by array
Homo sapiens
6
20/01/2017
122
-
Gene expression profiling of gemcitabine sensitive BxPC-3 pancreatic cancer cell lines and their derived resistant subclones, Bx-GEM
transcription profiling by array
Homo sapiens
6
20/01/2017
111
-
Altered mucosal expression of microRNAs in pediatric patients with inflammatory bowel disease
microRNA profiling by high-throughput sequencing
Homo sapiens
12
18/01/2017
-
ENA
115
-
Transcription profiling by array of the great vessel establishment in the zebrafish embryo
transcription profiling by array
Danio rerio
6
17/01/2017
-
121
-
RNA-seq of FACS purified cardiomyocytes from Drosophila melanogaster embryos at stage 13-16
RNA-seq of coding RNA
Drosophila melanogaster
2
17/01/2017
-
ENA
128
-
Peripheral tissue instruction is the primary determinant of CD8+ T cell pathogenicity: transcription profiling by array of donor CD8+ effector T cells isolated from the secondary lymphoid organs, blood and GVHD-target organs at D+6 post-transplant (B6>129 model)
transcription profiling by array
Mus musculus
35
16/01/2017
178
-
Transcription profiling of liver from from spontaneously hypertensive rats expressing human C-reactive protein treated with salsalate
transcription profiling by array
Rattus norvegicus
16
15/01/2017
-
136
-
Transcription profiling by high throughput sequencing of methamphetamine-sensitized and saline-control mouse nucleus accumbens
RNA-seq of coding RNA
Mus musculus
2
15/01/2017
-
ENA
132
-
Gene expression analysis in CITED2 knockdown MDA-MB-231 human breast cancer cells
transcription profiling by array
Homo sapiens
2
14/01/2017
-
172
-
A Long Noncoding RNA Acts as a Tumor Promoter in Hepatocellular Carcinoma
transcription profiling by array
Homo sapiens
5
14/01/2017
177
-
SAMHD1 restricts HIV-1 integration in human macrophages
transcription profiling by array
Homo sapiens
3
14/01/2017
119
-
Chromatin conformation of the Shh locus in limbs
DNA-seq
Mus musculus
26
12/01/2017
-
ENA
162
-
Expression analysis of Pea3 overexpression in SH-SY5Y cell line
transcription profiling by array
Homo sapiens
6
11/01/2017
-
117
-
Transcriptomics analysis of E. faecalis V583 exposed to subinhibitory concentration of chlorhexidine
transcription profiling by array
Enterococcus faecalis V583
6
11/01/2017
-
135
-
Nutritional programming of lifespan: Excessive sugar consumption in early adulthood curtails Drosophila survival by inhibiting dFOXO
RNA-seq of coding RNA
Drosophila melanogaster
14
11/01/2017
-
ENA
125
-
Comparative 454 pyrosequencing of transcripts to provide a resource for the study of embryogenesis of coconut (Cocos nucifera L.)
RNA-seq of coding RNA
Cocos nucifera L.
4
11/01/2017
-
ENA
111
-
RNA-seq of coding RNA from 22 wild-type strains of Drosophila melanogaster on the Drosophila Genetic reference Panel (DGRP) at embryonic time point 10-12 hrs after egg laying
RNA-seq of coding RNA
Drosophila melanogaster
22
10/01/2017
-
ENA
125
-
3'-Tag-Seq of Drosophila melanogaster embryos from 82 wild-type strains from the Drosophia Genetic Reference Panel (DGRP) over three time-points during embryogenesis
RNA-seq of coding RNA
Drosophila melanogaster
254
10/01/2017
-
ENA
144
-
Drosophila Genetic Reference Panel (DGRP) F1 RNA-seq - a comparison to 3prime-tag-seq variance decomposition analysis
RNA-seq of coding RNA
Drosophila melanogaster
12
10/01/2017
-
ENA
100
-
RNA-seq of Malassezia sympodialis
RNA-seq of coding RNA
Malassezia sympodialis
7
10/01/2017
ENA
107
-
BiTS Chromatin Immunoprecipitation of H3K4me3 and H3K27ac in Drosophila melanogaster differentiating cardiomyocytes
ChIP-seq
Drosophila melanogaster
2
10/01/2017
-
ENA
116
-
Transcriptomic data from early stages during zygotic embryo development in Pinus sylvestris L
RNA-seq of coding RNA
Pinus sylvestris
9
09/01/2017
ENA
100
-
Microarray analysis of differences in circulating miRNA expression between responders and non-responders to treatment of rheumatoid arthritis with allogeneic adipose-derived mesenchymal stem cells
transcription profiling by array
Homo sapiens
20
09/01/2017
101
-
5' CAGE at three embryonic times points in 82 Drosophila lines
RNA-seq of coding RNA
Drosophila melanogaster
29
09/01/2017
-
ENA
133
-
Transcription profiling by array of term placentas from women with pre-pregnancy obesity against those from women with normal pre-pregnancy weight
transcription profiling by array
Homo sapiens
10
07/01/2017
-
137
-
Mapping regulatory variation in sensory neurons using IPS lines from the HIPSCI project
RNA-seq of coding RNA
Homo sapiens
375
06/01/2017
-
ENA
26
-
EBIO does not induce cardiomyogenesis in human pluripotent stem cells but modulates cardiac subtype enrichment by lineage-selective survival
transcription profiling by array
Homo sapiens
6
04/01/2017
-
147
-
Gene expression profiling of bronchoalveolar lavage cells preceding a clinical diagnosis of chronic lung allograft dysfunction
transcription profiling by array
Homo sapiens
17
04/01/2017
152
-
microRNA profiling by array of paired breast tissues isolated immediately after breast cancer surgery and 30 mins after surgery with or without TARGIT radiotherapy treatment
microRNA profiling by array
Homo sapiens
28
03/01/2017
154
-
Transcriptional analysis of breast circadian clock
transcription profiling by array
Mus musculus
12
02/01/2017
137
-
Arabidopsis mutant with reduced expression of the Lys biosynthesis enzyme L,L-diaminopimelate aminotransferase (dapat)
transcription profiling by array
Arabidopsis thaliana
6
02/01/2017
-
127
-
Transcription profiling of human pluripotent cells cultured as suspension aggregates treated with CHIR99021
transcription profiling by array
Homo sapiens
18
30/12/2016
-
144
-
Transcription profiling of human bone marrow-derived mesenchymal stem cells transfected with miR-1246 mimic
transcription profiling by array
Homo sapiens
12
30/12/2016
-
139
-
Translational and transcriptional RNA-seq of SBDS cell lines
RNA-seq of coding RNA
Mus musculus
17
29/12/2016
-
ENA
169
-
RNASeq of musculoskeletal ageing using human mesenchymal stem cells and their tissue constructs
RNA-seq of coding RNA
Homo sapiens
30
28/12/2016
-
ENA
168
-
Transcription profiling of rice plants under the Sds (severe drought in soil) condition in shoot basal region
transcription profiling by array
Oryza sativa
4
26/12/2016
-
166
-
Transcription profiling of rice plants under the Md3 (pF3.5) condition in shoot basal region
transcription profiling by array
Oryza sativa
4
26/12/2016
-
145
-
Transcription profiling of rice plants under the Md2 (pF2.5) condition in shoot basal region
transcription profiling by array
Oryza sativa
4
26/12/2016
-
141
-
Transcription profiling of rice plants under the Sds (severe drought in soil) condition in shoots
transcription profiling by array
Oryza sativa
4
26/12/2016
-
135
-
Transcription profiling of rice plants under the Sda (Air-drying) condition in shoots
transcription profiling by array
Oryza sativa
4
26/12/2016
-
125
-
Transcription profiling of rice plants under the Md3 (pF3.5) condition in shoots
transcription profiling by array
Oryza sativa
4
26/12/2016
-
127
-
Transcription profiling of rice plants under the Md2 (pF2.5) condition in shoots
transcription profiling by array
Oryza sativa
4
26/12/2016
-
127
-
mouse hepatic gene whole transcript expression
transcription profiling by array
Mus musculus
6
25/12/2016
159
-
Transcription profiling by tiling array of wild-type or arp8-deleted budding yeast strains with or without hyperosmotic stress (0.4M NaCl)
transcription profiling by tiling array
Saccharomyces cerevisiae
24
24/12/2016
171
-
ChIP-seq of Escherichia coli RpoS during stationary phase
ChIP-seq
Escherichia coli str. K-12 substr. MG1655
2
23/12/2016
-
ENA
174
-
Transcription profling by array of murine pancreatic cancer cells treated with Fosl1 siRNA or control siRNA
transcription profiling by array
Mus musculus
6
23/12/2016
-
165
-
Gene expression patterns in 23 cervical samples of women having gone through different types of child birth
transcription profiling by array
Homo sapiens
24
22/12/2016
-
173
-
TFIIB ChIP-seq for S. cerevisiae - Genome-wide generalized additive models
ChIP-seq
Saccharomyces cerevisiae
2
22/12/2016
-
ENA
161
-
RNA expression in tongue squamous cell carcinoma, tumour free tongue tissue and control tongue
transcription profiling by array
Homo sapiens
44
21/12/2016
-
211
-
Deep sequencing of human naive CD4 T cells identifies miR-34c-5p as a novel regulator of T cell activation and HIV replication
microRNA profiling by high throughput sequencing
Homo sapiens
17
21/12/2016
-
ENA
189
-
Transcription profiling by array of Jurkat T cell line overexpressing miR-34c-5p
transcription profiling by array
Homo sapiens
5
21/12/2016
-
142
-
Defined chromosome structure in a minimal cell
DNA-seq
Mycoplasma pneumoniae M129
8
21/12/2016
-
ENA
133
-
RNA-Seq analyses of zebrafish cardiomyocytes at 72 hpf (hours post-fertilization)
RNA-seq of coding RNA
Danio rerio
2
20/12/2016
ENA
136
-
BMI1 regulates myogenic differentiation, Hippo signaling, and oncogene expression in embryonal rhabdomyosarcoma
RNA-seq of coding RNA
Homo sapiens
12
20/12/2016
-
ENA
164
-
Microarray analyses and miR-92a target prediction in primary mediastinal large B-cell lymphoma (PMBL) samples
transcription profiling by array
Homo sapiens
21
18/12/2016
-
175
-
RNA-seq of cerebrospinal fluid of Trypanosoma infected human patients
RNA-seq of coding RNA
Homo sapiens
13
17/12/2016
-
ENA
158
-
RNAseq of blood samples of Trypanosoma infected human patients
RNA-seq of coding RNA
Homo sapiens
6
17/12/2016
-
ENA
155
-
RNA-seq transcriptome profiling of the psychrophilic phytoplankton Fragilariopsis cylindrus under environmentally relevant growth limitations
RNA-seq of coding RNA
Fragilariopsis cylindrus
18
16/12/2016
-
ENA
189
-
Methylation Patterns in Han Chinese Neural Tube Defects Pedigrees
methylation profiling by array
Homo sapiens
24
15/12/2016
-
146
-
A systems toxicology approach for comparative assessment: Biological impact of an aerosol from a candidate modified-risk tobacco product and cigarette smoke on human organotypic bronchial epithelial cultures (miRNA data)
transcription profiling by array
Homo sapiens
357
15/12/2016
150
-
Comparative transcriptome analysis between immortalized ovarian surface epithelial (iOSE) and immortalized fallopian tube secretory epithelial (iFTE) cells
RNA-seq of coding RNA
Homo sapiens
8
15/12/2016
-
ENA
171
-
Functional Implications of microRNAs in Crohn’s Disease by Integrating microRNA and Messenger RNA Expression Profiling
microRNA profiling by array
Homo sapiens
30
15/12/2016
-
152
-
Investigation of the transcriptional changes associated with phenotype switching in Streptococcus equi subspecies equi strain 1691
RNA-seq of coding RNA
Streptococcus equi
6
15/12/2016
-
ENA
126
-
Transcriptional profiling of the MV4-11 cell line treated with trabectidin or azacitidin
transcription profiling by array
Homo sapiens
18
14/12/2016
141
-
Transcriptional profiling of Setd5 heterozygous and knockout mouse embryonic stem cells
RNA-seq of coding RNA
Mus musculus
6
13/12/2016
-
ENA
156
Methylation profiling by array of paired blood and saliva samples collected from ten volunteers in the Personal Genome Project (PGP) UK pilot study: PGP-UK10
methylation profiling by array
Homo sapiens
20
12/12/2016
-
59
-
Transcriptional responses to cold in five Pooideae species
RNA-seq of coding RNA
Brachypodium distachyon, Hordeum vulgare, Melica nutans, Nardus stricta, Stipa lagascae
59
12/12/2016
ENA
168
-
Transcription profiling by array of Solanum tuberosum leaves and tubers grown in altered above- and below-ground temperatures
transcription profiling by array
Solanum tuberosum
32
12/12/2016
-
155
-
Transcriptome profiling by array of Solanum tuberosum L. dormant and sprouting bud tissue
transcription profiling by array
Solanum tuberosum
8
12/12/2016
-
131
-
Transcriptional profiling by array of Solanum tuberosum cv. Agria leaf and tuber samples after mild heat stress
transcription profiling by array
Solanum tuberosum
16
12/12/2016
-
124
-
Exploiting native forces to capture chromosome conformation in mammalian cell nuclei
DNA-seq
Homo sapiens
32
10/12/2016
-
ENA
176
-
Transcriptomics analysis of Prunus L: Differential adaptative responses during short and long term hypoxia treatment
transcription profiling by array
Prunus persica
30
09/12/2016
127
-
The Sinorhizobium meliloti SmYbeY-dependent transcriptome probed with Sm14kOLI microarrays
transcription profiling by array
Sinorhizobium meliloti
8
08/12/2016
-
116
-
Intrinsic transcriptional heterogeneity in B cells controls early class switching to IgE
RNA-seq of coding RNA from single cells
Mus musculus
213
08/12/2016
-
ENA
215
-
RNA-seq of prefrontal cortex samples from 11-week old C57BL6/J and DBA/2J mice housed either with a mouse of the same strain or a mouse of the other strain
RNA-seq of coding RNA
Mus musculus
850
07/12/2016
ENA
200
-
RNA-seq from 53 human tissue samples from the Genotype-Tissue Expression (GTEx) Project
RNA-seq of coding RNA
Homo sapiens
18879
07/12/2016
-
-
864
RNA-seq of immortalized rat thyrocytes (PCCl3) treated with two thyroid disrupting chemicals (ethylenethiourea and chlorpyrifos) against untreated controls
RNA-seq of coding RNA
Rattus norvegicus
48
06/12/2016
ENA
208
Transcription profiling by array of OsPIL1/DREB1A double-overexpressing Arabidopsis lines
transcription profiling by array
Arabidopsis thaliana
8
06/12/2016
-
195
-
Transcription profiling by array of Atlantic Salmon livers fed for 11-weeks with one of three experimental diets
transcription profiling by array
Salmo salar
18
05/12/2016
-
148
-
Transcriptome profiling by array of duodenal biopsies from patients with refractory celiac disease type II
transcription profiling by array
Homo sapiens
11
05/12/2016
-
175
-
Transcription profiling by array of the hypothalamus of chickens selected for and against fearfulness
transcription profiling by array
Gallus gallus
24
05/12/2016
-
134
-
Xanthomonas campestris pv. Campestris 8004 far-red light irradiation and XccBphP overexpression transcriptional analysis
RNA-seq of coding RNA
Xanthomonas campestris pv. campestris
6
03/12/2016
ENA
141
-
4-week mouse comparative study on effect of neutralizing IL-17A, IL-17F and TNFa antibodies
transcription profiling by array
Mus musculus
75
02/12/2016
-
171
Transcription profiling by array of canine histiocytic sarcoma cell line (DH82) infected with Onderstepoort strain of canine distemper virus compared with uninfected controls
transcription profiling by array
Canis lupus familiaris
8
02/12/2016
170
miRNA profiling of rhabdomyosarcoma-derived exosomes compared to donor cells, using the Affymetrix GeneChip miRNA 3.0 array
microRNA profiling by array
Homo sapiens
24
01/12/2016
116
-
Pathways regulated by oncogenic PTEN/PI3K/AKT signalling in NSCLC
transcription profiling by array
Homo sapiens
9
01/12/2016
-
203
-
RNA-seq of A431 cell line after gefitinib treatment
RNA-seq of coding RNA
Homo sapiens
12
01/12/2016
-
ENA
199
microRNA expression of K562, Me45 and HCT116, with or without p53 knock-out, treated with ionizing radiation
microRNA profiling by array
Homo sapiens
8
01/12/2016
265
-
In vitro assessment of acute exposure of ths2.2 aerosol on organotypic acute human bronchial tissue cultures
transcription profiling by array
Homo sapiens
364
01/12/2016
168
-
Transcriptome analysis of inflorescences of the tomato mutant unfinished flower development (ufd)
transcription profiling by array
Solanum lycopersicum
6
01/12/2016
-
157
-
MicroRNA profiling from pooled plasma samples of patients with sepsis and systemic inflammatory response syndrome (SIRS)
microRNA profiling by high-throughput sequencing
Homo sapiens
10
01/12/2016
-
ENA
159
-
Single-cell RNA sequencing of spleen-derived LCK-expressing cells from adult zebrafish
RNA-seq of coding RNA from single cells
Danio rerio
864
01/12/2016
ENA
242
-
microRNA profiling by array of the colon of patients with colorectal cancer compared with healthy controls (part 2)
microRNA profiling by array
Homo sapiens
11
01/12/2016
-
177
-
Transcription profiling of cholangiocarcinoma cell line Mz-ChA-1 overexpressing Period 1 (Per1)
transcription profiling by array
Homo sapiens
6
01/12/2016
-
130
-
microRNA profiling by array of peripheral blood mononuclear cells from patients with early onset psoriatic arthritis, rheumatoid arthritis and healthy controls
microRNA profiling by array
Homo sapiens
44
01/12/2016
-
127
Global DNA methylation and gene expression comparison of olfactory neurosphere-derived cells, fibroblasts and induced pluripotent stem cells derived from the same schizophrenic donors
methylation profiling by array
Homo sapiens
50
01/12/2016
143
-
Transcription profiling by array of human mesenchymal stromal cells from patients with type I diabetes before and after autologous hematopoietic stem cell transplantation
transcription profiling by array
Homo sapiens
12
01/12/2016
-
131
-
Transcription profiling by array of Candida albicans wild type and tup1 mutants under different pH conditions
transcription profiling by array
Candida albicans
12
01/12/2016
101
-
Evaluation of the Tobacco Heating System 2.2 (THS2.2). Part 5: microRNA expression from a 90-day rat inhalation study indicates that exposure to THS 2.2 aerosol causes reduced effects on lung tissue compared with cigarette smoke
transcription profiling by array
Rattus norvegicus
112
30/11/2016
118
-
The differentially expressed genes of Zucker Diabetic Fatty Rats treated with Berberine against diabetes mellitus
transcription profiling by array
Rattus norvegicus
9
30/11/2016
-
108
-
Identification of urinary exosomal non-coding RNAs as novel biomarkers in chronic kidney disease
RNA-seq of non coding RNA
Homo sapiens
25
30/11/2016
-
ENA
137
-
Bacterial cellulose carrier maintains native endothelial cell differentiation in vitro
RNA-seq of coding RNA
Homo sapiens
28
30/11/2016
-
ENA
105
-
Differential expression in DEN/CCl4-induced murine hepatocellular carcinoma upon the genetic absence of Autotaxin (ATX) in hepatocytes
transcription profiling by array
Mus musculus
10
30/11/2016
-
92
-
Transcription profiling by array of 16 W12 basal cervical squamous epithelial cell clones
transcription profiling by array
Homo sapiens
48
30/11/2016
-
87
-
Differential RNA-seq for identifying toxin MazF and MqsR cleavage sites, beginning of transcripts and stationary phase cleavage sites in Escherichia coli (mRNA, rRNA and other ncRNA)
RNA-seq of non coding RNA
Escherichia coli K-12
25
30/11/2016
-
ENA
308
-
Transcription profiling by array of R27 plasmid genes in Escherichia coli MG1655 strain grown in logarithmic and early-stationary phase
transcription profiling by array
Escherichia coli str. K-12 substr. MG1655
6
30/11/2016
-
97
-
Splicing factor 1 modulates dietary restriction and TORC1 pathway longevity in C. elegans
RNA-seq of coding RNA
Caenorhabditis elegans, Homo sapiens
48
29/11/2016
-
ENA
225
-
Transcription profiling by array of pancreatic cells following p53-targeted RNA interference
transcription profiling by array
Homo sapiens
8
29/11/2016
-
102
-
RNA-seq transcription analysis of Herbaspirillum seropedicae phaC1 mutant strain in comparison with the wild type strain (SmR1)
RNA-seq of coding RNA
Herbaspirillum seropedicae
4
28/11/2016
-
31
-
Transcription profiling by array of pig peripheral blood mononuclear cells (PBMCs) vaccinated against porcine reproductive and respiratory syndrome (PRRS) to identify molecular pathways associated with "good" and "bad" PRRSV vaccine responders
transcription profiling by array
Sus scrofa
27
28/11/2016
-
89
-
Pediatric pineal germinomas: Epigenetic and genomic approach (transcription profiling)
transcription profiling by array
Homo sapiens
2
26/11/2016
-
98
-
Pediatric pineal germinomas: Epigenetic and genomic approach (methylation profiling)
methylation profiling by array
Homo sapiens
2
26/11/2016
-
79
-
Pediatric pineal germinomas: Epigenetic and genomic approach (comparative genomic hybridization)
comparative genomic hybridization by array
Homo sapiens
2
26/11/2016
-
77
-
Microarray analysis of islets of Langerhans from 3 week-old NOD, NOR and C57Bl/6 mice
transcription profiling by array
Mus musculus
12
25/11/2016
94
-
Left ventricle transcriptomic analysis reveals the initial decline in VO2peak from its lifetime apex associates with connective tissue accumulation
RNA-seq of coding RNA
Rattus norvegicus
37
25/11/2016
-
ENA
99
-
Coronary artery disease-associated genotype data in Mediterranean populations
genotyping by array
Homo sapiens
1696
24/11/2016
-
107
-
Transcriptional profiles of primary macrophages incubated with the F-MLV env124-138-env548-567 and env124-138-env548-567:E561R/A567F peptides
RNA-seq of coding RNA
Mus musculus
6
24/11/2016
-
ENA
110
-
4SU-iCLIP of PTBP1 from HEK293 cells
CLIP-seq
Homo sapiens
4
24/11/2016
-
ENA
108
-
Modified iCLIP sequencing of HeLa cells with antibody PTBP1 - excluded dephosphorylation step
CLIP-seq
Homo sapiens
1
24/11/2016
-
ENA
97
-
Modified iCLIP sequencing of HeLa cells with antibody eIF4A3 - additional 5' adapter ligation
CLIP-seq
Homo sapiens
2
24/11/2016
-
ENA
133
-
eIFA3 - iCLIP
CLIP-seq
Homo sapiens
2
24/11/2016
-
ENA
115
-
hMeDIP-seq of mouse intestinal stem and differentiated cells
MeDIP-seq
Mus musculus
6
23/11/2016
ENA
127
-
INTERLEUKIN 15-DEPENDENT T CELL-LIKE INNATE INTRAEPITHELIAL LYMPHOCYTES DEVELOP IN THE INTESTINE AND TRANSFORM INTO LYMPHOMAS IN CELIAC DISEASE
transcription profiling by array
Homo sapiens
9
23/11/2016
-
112
-
Meningeal cells contribute to postnatal cortical neurogenesis
RNA-seq of coding RNA
Mus musculus
14
23/11/2016
-
ENA
132
-
Transcriptomes of triple negative breast cancer enriched breast cancer cohort
transcription profiling by array
Homo sapiens
177
21/11/2016
-
260
-
Investigation of gene expression in biopsies from psoriasis patients before and after adalimumab treatment. Paired biopsies from non-lesional and lesional before treatment start and from psoriatic skin four and 14 days treatment start were included
transcription profiling by array
Homo sapiens
35
21/11/2016
148
Bulk segregant sequencing (Bulk-Seq) analysis to identify paternal suppressors of medea in Arabidopsis thaliana
genotyping by high throughput sequencing
Arabidopsis thaliana
6
18/11/2016
-
ENA
145
-
RNA-seq of Drosophila embryos with P218 mutation in the faint sausage (fas) gene against wild-type controls to study the role fo fas in pre-mRNA splicing during embryogenesis
RNA-seq of coding RNA
Drosophila melanogaster
6
18/11/2016
-
ENA
138
Endothelial inhibition of the glycolytic activator PFKFB3 induces tumor vessel normalization, impairs metastasis and improves chemotherapy
RNA-seq of coding RNA
Mus musculus
8
17/11/2016
-
ENA
197
-
RIP-seq analysis of Isw1 interacting transcripts
RIP-seq
Saccharomyces cerevisiae
18
17/11/2016
-
ENA
122
-
Time-course expression QTL atlas of the global transcriptional response of wheat to Fusarium graminearum
transcription profiling by array
Triticum aestivum
397
16/11/2016
-
152
-
BioCAP-Seq analysis of human chromosome 21 after its passage through either the mouse male germline
methylation profiling by high throughput sequencing
Mus musculus
6
16/11/2016
-
ENA
146
-
Chip-Seq analysis of human chromosome 21 after its passage through either the female or male mouse germline
ChIP-seq
Mus musculus
73
16/11/2016
-
ENA
154
-
RNA-Seq in liver of Tc1 mice carrying human chromosome 21 passaged through either the female or male germline
RNA-seq of coding RNA
Mus musculus
8
16/11/2016
-
ENA
123
-
RNA-seq of whole blood samples from human visceral leishmaniasis compared to samples from healthy uninfected controls
RNA-seq of coding RNA
Homo sapiens
8
16/11/2016
-
ENA
137
-
Genotyping by array of amniotic fluid sample from a fetus with developmental abnormalities to detect copy number variations
genotyping by array
Homo sapiens
2
16/11/2016
-
131
-
Indentification of Dis3L2 targets in Drosophila melanogaster wing imaginal discs
RNA-seq of coding RNA
Drosophila melanogaster
6
16/11/2016
-
ENA
103
-
Gene expression profile of experimentally Deformed wing virus (DWV)-infected honey bees: Naive control vs. DWV-infected pupae
transcription profiling by array
Apis mellifera
4
15/11/2016
-
131
-
Potato tuber gene expression during spraing formation in response to Tobacco rattle virus infection
transcription profiling by array
Solanum tuberosum
12
15/11/2016
-
105
-
Transcription profiling by array of pig intestinal cells exposed to Zearalenone or E. coli contamination
transcription profiling by array
Sus scrofa
11
15/11/2016
-
109
-
Experiment to determine the effect of deleting the Rv1675c gene on the transcriptome of Mycobacterium tuberculosis
transcription profiling by array
Mycobacterium tuberculosis
12
15/11/2016
-
110
-
Transcriptional profiling of mammary gland and spleen from Mycoplasma agalactiae infected sheep
RNA-seq of coding RNA
Ovis aries
24
14/11/2016
-
ENA
125
-
ChIP-sequencing of Streptomyces albus S4 WT and fscRI
ChIP-seq
Streptomyces albus
5
14/11/2016
-
ENA
126
-
microRNA profiling by array of PDGF-alpha overexpression in HUVECs and a human melanoma cell line
microRNA profiling by array
Homo sapiens
12
14/11/2016
-
139
-
Transcription profiling by array of PDGF-alpha overexpression in HUVECs and a human melanoma cell line
transcription profiling by array
Homo sapiens
12
14/11/2016
-
136
-
Profiling of circulating microRNAs in blood of patents with liver cirrhosis or hepatocellular carcinoma
transcription profiling by array
Homo sapiens
23
14/11/2016
-
145
-
Non-Replicating Mycobacterium tuberculosis Elicits a Reduced Infectivity Profile with Corresponding Modifications to the Cell Wall and Extracellular Matrix
transcription profiling by array
Mycobacterium tuberculosis
38
14/11/2016
-
109
-
Blood mRNA profiling to support prognosis of disease severity in respiratory syncytial virus infected infants
transcription profiling by array
Homo sapiens
64
11/11/2016
-
164
-
Genome-wide profiling of Glucocorticoid receptor binding in A549, Nalm-6, MEF WT and MEF GCN5/PCAF double knockout (ChIP-seq)
ChIP-seq
Homo sapiens, Mus musculus
8
10/11/2016
ENA
148
-
Whole-genome expression analysis in IFNgamma stimulated bone marrow-derived macrophages from transgenic mice expressing only non-nuclear mutant Socs1
transcription profiling by array
Mus musculus
8
10/11/2016
111
-
Transcription profiling by array of CD4+ tumor infiltrating CD146+ and CD146- T-lymphocytes from three renal carcinoma patients
transcription profiling by array
Homo sapiens
6
10/11/2016
-
160
-
Trim24 ChIP-seq in embryonic stem (ES) cells grown by 2i+LIF (2iL) and serum media
ChIP-seq
Mus musculus
1
08/11/2016
-
ENA
233
-
Transcription profiling by array of human primary astrocytes, cancer stem cells derived from astrocytes overexpressing various oncogenic and iPSC-inducing factors, glioma stem cells and gliblastomat cell line to compare their expression profiles and tumor-initiating capabilities
transcription profiling by array
Homo sapiens
15
07/11/2016
-
211
iCLIP transcriptome-wide mapping of UNR (CSDE1) binding sites
CLIP-seq
Homo sapiens
4
07/11/2016
ENA
162
-
Ribosome profiling of UNR (CSDE1) shRNA knockdown in SK-MEL-103 melanocytes
translation profiling
Homo sapiens
6
07/11/2016
-
163
-
Transcription profiling by high throughput sequencing of a bZIP29 dominant negative repressor line in root tips of Arabidopsis
RNA-seq of coding RNA
Arabidopsis thaliana
6
07/11/2016
ENA
230
Gene expression profiling of colon mucosa after cytotoxic insult in wild type and Apc-mutated rats: possible relation with resistance to apoptosis during carcinogenesis
transcription profiling by array
Rattus norvegicus
8
03/11/2016
-
181
-
Urinary exosomal miRNA signatures in type II diabetic nephropathy patients
microRNA profiling by array
Homo sapiens
24
03/11/2016
-
203
-
Biomarkers of hippocampal gene expression in a mouse restraint chronic stress model
transcription profiling by array
Mus musculus
24
02/11/2016
-
210
-
Genotyping by array of human primary acute myeloid leukemia cells on the Affymetrix 6.0 SNP array to evaluate prognostic relevance
genotyping by array
Homo sapiens
227
02/11/2016
-
253
-
Copy-number variation (CNV) study of glioblastoma parental tumors and paired patient derived cell lines (PDCLs) to study the extent PDCLs recapitulates the genome landscape of parental tumor
comparative genomic hybridization by array
Homo sapiens
20
01/11/2016
-
264
-
Transcription profiling by array of nine pairs of Glioblastoma tumors and paired patient derived cell lines (PDCLs) to study the extent to which PDCLs recapitulates the genome landscape of parental tumors
transcription profiling by array
Homo sapiens
18
01/11/2016
-
239
-
Transcription profiling by array of Schizosaccharomyces pombe 972 h- treated with antimycin
transcription profiling by array
Schizosaccharomyces pombe
3
01/11/2016
-
172
-
transcription profiling by array of fission yeast during adaptation to respiratory medium
transcription profiling by array
Schizosaccharomyces pombe
14
01/11/2016
-
174
-
Transcription profiling of patient-derived acute myeloid leukemia cells to study the association of UNCX expression with proliferation and differentiation of myeloid cells
transcription profiling by array
Homo sapiens
6
01/11/2016
-
184
-
Transcriptional profiling by array of Arabidopsis thaliana closed floral buds from young primary inflorescences of wild type (Ws-3) and DRINK ME (AT2G21230) overexpression line
transcription profiling by array
Arabidopsis thaliana
2
01/11/2016
-
176
-
MicroRNA expression profiling of normal and glioblastoma-derived neural stem cells
microRNA profiling by array
Homo sapiens
38
01/11/2016
-
205
-
Treatment of non-CML CD34+ cells with EZH2 inhibitor GSK343
transcription profiling by array
Homo sapiens
6
01/11/2016
-
168
-
miRNASeq of musculoskeletal ageing using human mesenchymal stem cells and their tissue constructs
RNA-seq of non coding RNA
Homo sapiens
30
01/11/2016
-
ENA
225
-
Treatment of CML CD34+ cells with EZH2 inhibitor GSK343
transcription profiling by array
Homo sapiens
6
01/11/2016
-
166
-
Transcription profiling by array of involution day 2 mammary glands in Rac1 knockout and wild type mice
transcription profiling by array
Mus musculus
6
31/10/2016
-
165
A PP2A-Pab1-mediated crosstalk between TORC1 & TORC2 regulates the differentiation response in fission yeast
RNA-seq of coding RNA
Schizosaccharomyces pombe
18
31/10/2016
-
ENA
164