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AccessionTitleTypeOrganismAssaysReleasedProcessedRawAtlas
miRNA profile of SEB-activated in vitro female C57BL/6 mouse splenocytes treated with Indole-3-carbinol (I3C) or 3,3'-diindolylmethane (DIM)
microRNA profiling by array
Mus musculus
3
Yesterday
-
-
Rapid reprogramming of epigenetic and transcriptional profiles in mammalian culture systems (hmeDIP-seq)
methylation profiling by high throughput sequencing
Mus musculus
4
19/12/2014
-
ENA
-
Transcription profiling by array of mouse pancreas (at different developmental stages), islets, and brain from NeuroD knockouts
transcription profiling by array
Mus musculus
12
18/12/2014
-
Transcriptome profiling after PhrG, EDF and CSP quorum sensing peptide treatment of MCF-7/AZ cells
transcription profiling by array
Homo sapiens
8
17/12/2014
-
-
Rapid reprogramming of epigenetic and transcriptional profiles in mammalian culture systems (hMeDIP-chip)
methylation profiling by array
Mus musculus
16
17/12/2014
-
-
Rapid reprogramming of epigenetic and transcriptional profiles in mammalian culture systems (MeDIP-chip)
methylation profiling by array
Mus musculus
16
17/12/2014
-
-
Rapid reprogramming of epigenetic and transcriptional profiles in mammalian culture systems (expression profiling)
transcription profiling by array
Mus musculus
18
17/12/2014
-
-
CLIP-seq of HIV-1 infected cells and HIV-1 virions to identify the RNA binding sites of APOBEC3G and APOBEC3F
CLIP-Seq
Homo sapiens, Human immunodeficiency virus
24
17/12/2014
-
ENA
-
RNA-Seq of Wolbachia infected and uninfected spider mites
RNA-seq of coding RNA
Tetranychus urticae
4
17/12/2014
-
ENA
-
miR-206/133b knock-out
transcription profiling by array
Mus musculus
17
17/12/2014
-
-
Transcription profiling by array of H. sapiens female blood promyeloblastNcells to investigate eutrophil-derived pro-inflammatory cytokine response and degranulation in function of time and dose of LPS treatment
transcription profiling by array
Homo sapiens
12
17/12/2014
-
-
GENCODE PCR-Seq Batch XV
RNA-seq of coding RNA, RNA-seq of non coding RNA
Homo sapiens
8
16/12/2014
-
ENA
-
GENCODE PCR-Seq Batch XIV
RNA-seq of coding RNA, RNA-seq of non coding RNA
Homo sapiens
8
16/12/2014
-
ENA
-
Transcription profiling by array of IL-4+IL-13 stimulated macrophages in the presence or absence of 40mM of NaCl to study the effect of salt as a modulator of pro-inflammatory immune cell polarization
transcription profiling by array
Mus musculus
8
16/12/2014
-
-
Genome-wide blood DNA methylation levels in MARTHA participants
methylation profiling by array
Homo sapiens
238
15/12/2014
-
-
Transcription profiling by array of dorsal root ganglion over-expressing NRG1 typeIII ICD (Intra Cellular Domain)
transcription profiling by array
Rattus norvegicus
12
14/12/2014
-
-
Gene expression profiling of Mycobacterium tuberculosis strain CDC1551 treated with experimental compounds
transcription profiling by array
Mycobacterium tuberculosis CDC1551
9
13/12/2014
-
-
Single-cell RNA-sequencing of Platynereis dumerilii larval brain cells
RNA-seq of coding RNA from single cells
Platynereis dumerilii
213
13/12/2014
-
ENA
-
Transcriptional changes in Escherichia coli during a shift from fermentation to Trimethylamine-N-oxide (TMAO) respiration
transcription profiling by array
Escherichia coli str. K-12 substr. MG1655
22
13/12/2014
-
Identification of differentially expressed microRNA in human alveolar bone cells cultured on different titanium surfaces.
microRNA profiling by array
Homo sapiens
12
12/12/2014
-
-
Transcription profiling by array of ovarian cancer samples with different tumor grades
transcription profiling by array
Homo sapiens
85
12/12/2014
-
ChIP-seq and transcription profiling by array of OCIAML3 human leukemia cell line treated with either I-BET151, leptomycin B (LMB) or DMSO (vehicle)
ChIP-seq, transcription profiling by array
Homo sapiens
9
12/12/2014
, ENA
-
Transcription profiling by array of M. musculus MN9D mouse cell line to investigate overexpression of (E) En1 , and (P) Pitx3+En1
transcription profiling by array
Mus musculus
12
11/12/2014
-
Analysis of Evi-deficient teratoma
transcription profiling by array
Mus musculus
8
10/12/2014
-
Gene expression arrays of Utx shRNA #1 & control murine T-cell acute lymphoblastic leukemia samples
transcription profiling by array
Mus musculus
14
10/12/2014
-
-
GeoChip data of soil microbial communities in the maize rhizosphere and bulk soils
comparative genomic hybridization by array
soil metagenome
6
10/12/2014
-
-
Transcriptome analysis of retinal tumor onset and progression in a zebrafish optic pathway tumor line
RNA-seq of coding RNA
Danio rerio
42
10/12/2014
-
ENA
-
Methylation profiling by array of human paired adipose tissue (subcutaneous and omentum) before and after gastric-bypass and weight loss
methylation profiling by array
Homo sapiens
120
09/12/2014
-
Transcription profiling by array of undifferentiated or differentiated H1 human embryonic stem cells transfected with let-7 or HPAT5-Mut/WT
transcription profiling by array
Homo sapiens
15
09/12/2014
-
Mh SP17 biofilms on Hydrophobic Organic Compounds (HOCs)
transcription profiling by array
Marinobacter hydrocarbonoclasticus ATCC 49840
9
09/12/2014
-
-
Deciphering myeloma risk loci by eQTL analysis
transcription profiling by array
Homo sapiens
665
09/12/2014
-
Single cell transcriptomics of haemopoetic stem and progenitor cells
RNA-seq of coding RNA
Mouse
1152
09/12/2014
-
ENA
-
Parent of origin allelic expression bias in mouse vomernasal organ
RNA-seq of coding RNA
Mus musculus
30
09/12/2014
-
ENA
-
Global gene expression profiles during differentiation of human induced pluripotent stem cells to macrophages
RNA-seq of coding RNA
Homo sapiens, Mus musculus
20
09/12/2014
-
ENA
-
Single cell RNAseq of transformed Ba F3 cells
DNA-seq
Mouse
384
09/12/2014
-
ENA
-
Gene Expression Survey of Transcription Factors using RT-PCR
transcription profiling by RT-PCR
Homo sapiens
27
08/12/2014
-
-
Transcription profiling by array of fruits from 'Oded' and 'Hermoza' cultivars of peach subjected to different times of cold storage
transcription profiling by array
Prunus persica
17
08/12/2014
-
Transcription profiling by array of Medicago truncatula roots to decipher the genetic regulation underlying the arsenite effect on the model symbiotic interaction Medicago-Sinorhizobium
transcription profiling by array
Medicago truncatula
14
08/12/2014
-
Chronic cystitis microarray comparing C3H/HeN and C57BL/6 bladder gene expression
transcription profiling by array
Mus musculus
18
06/12/2014
-
Transcription profiling by tiling array of wild-type or reb1-deleted budding yeast strains
transcription profiling by tiling array
Saccharomyces cerevisiae
16
05/12/2014
-
-
Genome-wide occupancy of Bye1, TFIIS and Pol II in yeast Saccharomyces cerevisiae by ChIP-chip
ChIP-chip by array
Saccharomyces cerevisiae
11
05/12/2014
-
H2A.Z (pht1) ChIP-seq data in 968, Y0036, and swc5-del strains
ChIP-seq
Schizosaccharomyces pombe
36
04/12/2014
-
ENA
-
RNA sequencing of 968xY0036 fission yeast recombinant library
RNA-seq of coding RNA, RNA-seq of non coding RNA
Schizosaccharomyces pombe
68
04/12/2014
ENA
-
Comparison of tamoxifen and letrozole response in mammary preneoplasia of ER and aromatase over-expressing mice defines an immune-associated gene signature linked to tamoxifen resistance
RNA-seq of coding RNA
Mus musculus
17
04/12/2014
-
-
-
C.elegans treated with control or elt-2 RNAi during adulthood and exposed to E. coli or P. aeruginosa
transcription profiling by array
Caenorhabditis elegans
14
04/12/2014
-
Endothelial Cells Control Pancreatic Cell Fate at Defined Stages through EGFL7 Signaling
RNA-seq of coding RNA
Homo sapiens, Mus musculus
7
04/12/2014
-
-
-
RNA profiling of two endothelial cells (MPEC and AKT-HUVEC) and one human fibroblast line (BJ)
RNA-seq of coding RNA
Homo sapiens, Mus musculus
3
04/12/2014
-
-
-
RNA profiling of PDX1+ pancreatic progenitors before or after co-culture with different types of cells
RNA-seq of coding RNA
Homo sapiens
4
04/12/2014
-
-
-
Genome-wide analysis of atypical NK cell subset in mouse model of Systemic Lupus Erythematosus (SLE)
transcription profiling by array
Mus musculus
6
04/12/2014
-
-
Global gene transcriptional profiles in RAW 264.7 cells following mica fine particle stimulation
transcription profiling by array
Mus musculus
6
04/12/2014
-
-
Vaccine-Elicited CD4 T Cells Induce Immunopathology Following Chronic LCMV Infection
transcription profiling by array
Mus musculus
7
04/12/2014
-
Gene expression profiles during larval development for pearl oyster, Pinctada fucata
transcription profiling by array
Pinctada fucata
15
04/12/2014
-
Methanol and Methylamine Utilization Pathways in Methyloversatilis universalis FAM5: Genome Wide Gene Expression and Mutagenesis Studies
RNA-seq of coding RNA
Methyloversatilis universalis FAM5
4
04/12/2014
-
-
chronic temporal lobe epilepsy: biopsy hippocampus
transcription profiling by array
Homo sapiens
150
04/12/2014
-
Paternal diet defines offspring chromatin state and intergenerational obesity.
RNA-seq of coding RNA
Drosophila melanogaster
8
04/12/2014
-
-
-
Novel selective regulation of hematopoietic progenitor self-renewal, survival and proliferation by estrogens has therapeutic potential in myeloproliferative neoplasms
RNA-seq of coding RNA
Mus musculus
18
04/12/2014
-
-
-
Testis expression in Mus musculus domesticus x Mus musculus musculus hybrid zone mice
transcription profiling by array
Mus musculus musculus x M. m. domesticus
190
04/12/2014
-
-
Transcriptome analysis of zebrafish heart exposed to sorafenib
transcription profiling by array
Danio rerio
8
04/12/2014
-
Deconstructing the dynamic transcriptional program of pluripotent stem cells.
ChIP-seq, RNA-seq of coding RNA
Mus musculus
441
04/12/2014
-
-
-
The oncogenic microRNA hsa-mir-155-5p targets the transcription factor ELK3 and links it to the hypoxia response and the Hypoxia Inducible Factor HIF1α
ChIP-seq
Homo sapiens
2
04/12/2014
-
-
-
Deficiency in glucose transporter 12 results in heart failure and a diabetic phenotype in zebrafish
RNA-seq of coding RNA
Danio rerio
6
04/12/2014
-
-
Uridylation by TUT4 and TUT7 marks mRNA for degradation
other, RNA-seq of coding RNA
Homo sapiens
30
04/12/2014
-
-
Uridylation by TUT4 and TUT7 marks mRNA for degradation [TAIL-Seq]
other
Homo sapiens
39
04/12/2014
-
-
Uridylation by TUT4 and TUT7 marks mRNA for degradation [RNA-Seq]
RNA-seq of coding RNA
Homo sapiens
16
04/12/2014
-
-
-
Gene expression of SUM159-mir100 ALDH+ and ALDH- cells from CTRL or mir100-overexpressing group
transcription profiling by array
Homo sapiens
4
04/12/2014
-
The exon junction complex is required for definition and excision of neighboring introns in Drosophila
RNA-seq of coding RNA
Drosophila melanogaster
9
04/12/2014
-
-
-
Expression data from Saccharomyces cerevisae RNAPII mutant strains
transcription profiling by array
Saccharomyces cerevisiae
15
04/12/2014
-
-
ChIP-chip data of Rrm3-Flag in wild-type and rpb1-1 cells
ChIP-chip by tiling array
Saccharomyces cerevisiae
4
04/12/2014
-
-
-
DNA binding activities of the C-clamp
ChIP-seq
Homo sapiens
8
04/12/2014
-
-
Rsk2 controls synovial fibroblast hyperplasia and the course of arthritis.
transcription profiling by array
Mus musculus
6
04/12/2014
-
Cigarette smoke-induced iBALT mediates macrophage activation in a B cell-dependent manner in COPD
transcription profiling by array
Mus musculus
12
04/12/2014
-
-
Effect of ARF on the transcription of p53 target genes in homologous recombination deficient cells
transcription profiling by array
Mus musculus
12
04/12/2014
-
-
Effects of pregnancy on hepatic gene expression in CYP2D6-humanized mice
transcription profiling by array
Mus musculus
6
04/12/2014
-
HipSci-RNAseq-healthy volunteers
RNA-seq of coding RNA
Homo sapiens
44
04/12/2014
-
EGA
-
Pseudomonas aeruginosa PAO1 strain exposure to thiazolidinedione (TZD) derivative
comparative genomic hybridization by array
Pseudomonas aeruginosa PAO1
3
03/12/2014
-
Signatures of selection in the stickleback transcriptome.
transcription profiling by array
Gasterosteus aculeatus
332
03/12/2014
-
The quantitative genetics of transcriptional variation in stickleback liver.
transcription profiling by array
Gasterosteus aculeatus
297
03/12/2014
-
Transcriptome-wide analysis of mRNA decay in normal and osteoarthritic human articular chondrocytes
transcription profiling by array
Homo sapiens
1
03/12/2014
-
Transcription profiling by array of human THP-1 monocytes treated with lipopolysaccharide and the dietary iothiocyanate sulforaphane
transcription profiling by array
Homo sapiens
12
03/12/2014
-
-
Age-associated DNA methylation increases in mouse pancreatic islets suggest an epigenetic drift toward the exocrine pancreas epigenome
methylation profiling by high throughput sequencing
Mus musculus
25
03/12/2014
-
-
-
Expression data from individual MEF2A isoform knockdown in C2C12 myotubes
transcription profiling by array
Mus musculus
15
03/12/2014
-
MicroRNA targetome analysis during HCMV infection
RNA-seq of coding RNA, RNA-seq of non coding RNA
Homo sapiens
40
03/12/2014
-
-
The relative importance of DNA methylation and Dnmt2-mediated epigenetic regulation on Wolbachia densities and cytoplasmic incompatibility
methylation profiling by high throughput sequencing
Drosophila melanogaster
2
03/12/2014
-
-
-
Apoptotic caspases prevent the induction of type I interferons by mitochondrial DNA
RNA-seq of coding RNA
Mus musculus
8
03/12/2014
-
-
-
The human nuclear exosome targeting complex is loaded onto newly synthesized RNA to direct early ribonucleolysis
other, RNA-seq of coding RNA
Homo sapiens
4
03/12/2014
-
-
The HDAC inhibitor panobinostat acts as a sensitizer for erlotinib activity in EGFR mutated and wildtype NSCLC cells
comparative genomic hybridization by array
Homo sapiens
3
03/12/2014
-
Effects of TiO2 and Ag nanoparticles on polyhydroxybutyrate biosynthesis by activated sludge bacteria
transcription profiling by array
mixed sample
18
03/12/2014
-
NF-κB-direct activation of microRNAs with repressive effects on monocyte-specific genes is critical for osteoclast differentiation
transcription profiling by RT-PCR
Homo sapiens
9
03/12/2014
-
-
-
Distinct roles of Tet1 and Tet2 in mouse embryonic stem cells [MeDIP-Seq]
methylation profiling by high throughput sequencing
Mus musculus
6
03/12/2014
-
-
-
Whole transcriptome of Lewis lung carcinoma cells of Mus musculus
RNA-seq of coding RNA
Mus musculus
2
03/12/2014
-
-
-
Hairpin Capture of DNA End Structures reveals chromosomal DNA end structure with single nucleotide resolution
other
Mus musculus
98
03/12/2014
-
-
-
mRNASeq of Nitrosomonas europaea and Nitrobacter winogradskyi
RNA-seq of coding RNA
, Nitrobacter winogradskyi, Nitrosomonas europaea
9
03/12/2014
-
-
-
Inferring the stress-activated signaling network in yeast through multi-omic data integration
transcription profiling by array
Saccharomyces cerevisiae
67
03/12/2014
-
SINGLE CELL ANALYSIS OF IN VITRO ERYTHROPOIESIS
RNA-seq of coding RNA
Homo sapiens
192
03/12/2014
-
EGA
-
PREDICT
DNA-seq
Homo sapiens
143
03/12/2014
-
EGA
-
Transcriptome profiling of e11.25 mouse pancreas: comparison between Ngn3-/- and Ngn3-/- ; Pdx1::Ngn3ER TM pancreatic epithelium
transcription profiling by array
Mus musculus
6
02/12/2014
-
Expression profiling of primary calvaria osteoblasts treated with miR-195 mimic, rhBMP2 and at different stages of differentiation
transcription profiling by array
Mus musculus
18
02/12/2014
-
-
CLIP-Seq of H. sapiens HeLa cells to investigate transcriptome-wide mapping of PTB / hnRNP I
CLIP-seq
Homo sapiens
5
01/12/2014
-
ENA
-
CLIP-Seq of H. sapiens HeLa cells to investigate transcriptome-wide mapping of Matrin3
CLIP-seq
Homo sapiens
5
01/12/2014
-
ENA
-
Differential DNA methylation profiles of coding and non-coding genes define hippocampal sclerosis in human temporal lobe epilepsy - miRNA
methylation profiling by array
Homo sapiens
20
01/12/2014
-
-