E-TABM-147 - Transcription profiling of 57 human bladder carcinoma samples

Status
Released on 10 November 2006, last updated on 2 May 2014
Organism
Homo sapiens
Samples (62)
Arrays (2)
Protocols (8)
Description
Transcriptome analysis of 57 bladder carcinomas on Affymetrix HG-U95A and HG-U95Av2 microarrays
Experiment types
 co-expression, disease state, transcription profiling by array
Contact
Citations
Regional copy number-independent deregulation of transcription in cancer. Stransky N, Vallot C, Reyal F, Bernard-Pierrot I, de Medina SG, Segraves R, de Rycke Y, Elvin P, Cassidy A, Spraggon C, Graham A, Southgate J, Asselain B, Allory Y, Abbou CC, Albertson DG, Thiery JP, Chopin DK, Pinkel D, Radvanyi F. Nature Genetics 38(12):1386-1396 (2006), Europe PMC 17099711
Combined Gene Expression and Genomic Profiling Define Two Intrinsic Molecular Subtypes of Urothelial Carcinoma and Gene Signatures for Molecular Grading and Outcome. Lindgren, David; Frigyesi, Attila; Gudjonsson, Sigurdur; Sjodahl, Gottfrid; Hallden, Christer; Chebil, Gunilla; Veerla, Srinivas; Ryden, Tobias; Mansson, Wiking; Liedberg, Fredrik; Hoglund, Mattias.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-TABM-147.idf.txt
Sample and data relationshipE-TABM-147.sdrf.txt
Raw data (2)E-TABM-147.raw.1.zip, E-TABM-147.raw.2.zip
Processed data (1)E-TABM-147.processed.1.zip
Array designsA-AFFY-1.adf.txt, A-AFFY-9.adf.txt
R ExpressionSetE-TABM-147.eSet.r
Links