E-TABM-135 - Transcription profiling of 100 Arabidopsis Col/Ler recombinant inbred lines to generate a high-density genetic linkage map
Submitted on 18 August 2006, released on 1 September 2006, last updated on 10 June 2011
The aim of this study was to generate a high-density genetic linkage map of Arabidopsis. A custom-designed exon-specific whole-genome array was used to identify ~16,000 significant SFP markers between the parental accessions Col and Ler. Subsequently 100 Col/Ler recombinant inbred lines (RILs) were hybridized to the whole genome exon arrays and the SFP-markers genotyped in all lines.
transcription profiling by array, genotyping, strain or line
A High-Resolution Map of Arabidopsis Recombinant Inbred Lines by Whole-Genome Exon Array Hybridization. Tatjana Singer, Yiping Fan, Hur-Song Chang, Tong Zhu, Samuel P. Hazen, Steven P. Briggs. PLoS Genet (2006)