E-SGRP-1 - Comparative genomic hybridization of forty clinical isolates from twelve common serovars within Salmonella enterica subspecies I (sspI) to identify the conserved gene pool present

Status
Submitted on 7 July 2005, released on 6 December 2005, last updated on 27 March 2012
Organism
Salmonella enterica subspecies I
Samples (40)
Array (1)
Protocols (7)
Description
We have performed microarray hybridization studies on forty clinical isolates from twelve common serovars within Salmonella enterica subspecies I (sspI) to identify the conserved gene pool present.
Experiment types
comparative genomic hybridization by array, comparative genome hybridization, strain or line
Contacts
Matloob Qureshi, Al Ivens, Chris Marooney, Gordon Dougan, Maria Fookes, Martin J. Woodward, Muna F. Anjum, Stephen Baker
Citation
Identification of Core and Variable Components of the Salmonella enterica Subspecies I Genome by Microarray. Anjum, Muna F.; Marooney, Chris; Fookes, Maria; Baker, Stephen; Dougan, Gordon; Ivens, Al; Woodward, Martin J. Infect Immun 73(12):7894 (2005), Europe PMC 16299280
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-SGRP-1.idf.txt
Sample and data relationshipE-SGRP-1.sdrf.txt
Raw data (1)E-SGRP-1.raw.1.zip
Array designA-SGRP-1.adf.txt
Links