E-NASC-73 - Transcription profiling by array of Arabidopsis C24 plants with different ploidy levels

Status
Released on 29 March 2007, last updated on 2 May 2014
Organism
Arabidopsis thaliana
Samples (11)
Array (1)
Protocols (6)
Description
By reciprocally crossing 2x and 4x C24 ecotype plants, we have generated 4 types of offspring with various ploidy (2x; 3x; 4x) or parent-of-origin genome dosage (3x from 4xper2x; 3x from 2xper4x). For each offspring generated, total RNA was extracted using Trizol from 8 seedlings 9 days after germination (developmental stage1.02, 2 leaves). Sample names:
Experiment types
transcription profiling by array, strain or line
Contacts
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-NASC-73.idf.txt
Sample and data relationshipE-NASC-73.sdrf.txt
Raw data (1)E-NASC-73.raw.1.zip
Processed data (1)E-NASC-73.processed.1.zip
Array designA-AFFY-2.adf.txt
R ExpressionSetE-NASC-73.eSet.r
Links