E-MTAB-513 - RNA-Seq of human individual tissues and mixture of 16 tissues (Illumina Body Map)

Status
Released on 5 May 2011, last updated on 11 July 2014
Organism
Homo sapiens
Samples (19)
Protocols (6)
Description
Transcription profiling by high throughput sequencing of individual and mixture of 16 human tissues RNA.
Experiment types
RNA-seq of coding RNA, co-expression, optimization, organism part comparison
Contact
Citations
Detection of redundant fusion transcripts as biomarkers or disease-specific therapeutic targets in breast cancer. Asmann YW, Necela BM, Kalari KR, Hossain A, Baker TR, Carr JM, Davis C, Getz JE, Hostetter G, Li X, McLaughlin SA, Radisky DC, Schroth GP, Cunliffe HE, Perez EA, Thompson EA .
The evolutionary landscape of alternative splicing in vertebrate species. Barbosa-Morais NL, Irimia M, Pan Q, Xiong HY, Gueroussov S, Lee LJ, Slobodeniuc V, Kutter C, Watt S, Colak R, Kim T, Misquitta-Ali CM, Wilson MD, Kim PM, Odom DT, Frey BJ, Blencowe BJ.
The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression. Derrien T, Johnson R, Bussotti G, Tanzer A, Djebali S, Tilgner H, Guernec G, Martin D, Merkel A, Knowles DG, Lagarde J, Veeravalli L, Ruan X, Ruan Y, Lassmann T, Carninci P, Brown JB, Lipovich L, Gonzalez JM, Thomas M, Davis CA, Shiekhattar R, Gingeras TR, Hubbard TJ, Notredame C, Harrow J, Guigó R .
MINSEQE
Exp. designProtocolsFactorsProcessedSeq. reads
Files
Investigation descriptionE-MTAB-513.idf.txt
Sample and data relationshipE-MTAB-513.sdrf.txt
Links