E-MTAB-4723 - RNA-seq of coding RNA from 22 wild-type strains of Drosophila melanogaster on the Drosophila Genetic reference Panel (DGRP) at embryonic time point 10-12 hrs after egg laying

Status
Last updated on 9 January 2017, released on 10 January 2017
Organism
Drosophila melanogaster
Samples (22)
Protocols (5)
Description
Sequencing of mRNAs of 22 wild type strains from the Drosophila Genetic reference Panel (DGRP) at embryonic time point 10-12 hrs after egg laying was performed. ~100 embryos were pooled for each biological sample prior to library preparation.
Experiment types
RNA-seq of coding RNA, development or differentiation design, population based design
Contacts
Citation
Genetic variants regulating expression levels and isoform diversity during embryogenesis. Cannavò E, Koelling N, Harnett D, Garfield D, Casale FP, Ciglar L, Gustafson HE, Viales RR, Marco-Ferreres R, Degner JF, Zhao B, Stegle O, Birney E, Furlong EE.  (2016), Europe PMC 28024300
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-4723.idf.txt
Sample and data relationshipE-MTAB-4723.sdrf.txt
Links