E-MTAB-401 - Transcription profiling by array of mouse F2 cross with carbohydrate and high fat diets to investigate stress on heart tissue

Status
Released on 17 September 2011, last updated on 8 April 2014
Organism
Mus musculus
Samples (183)
Array (1)
Protocols (7)
Description
The effect of high fat diet feeding on heart gene transcription regulation was investigated in an F2 cross of 129S6 x Balb/c mice using Illumina gene expression arrays. Expression data was determined in 5 months old male mice fed a high fat diet (40% fat) for 15 weeks. Control mice were fed a standard carbohydrate chow. 96 animals per group were used. The files mouse-f2-chd-genotype.txt and HFD.txt contain genotyping data linked to the diets, they can be found found in the file E-MTAB-401.additional.zip on the FTP for this submission. NOTE: the file CHD.txt was replaced by the updated file mouse-f2-chd-genotype.txt on 8th April 2014.
Experiment types
transcription profiling by array, all pairs, co-expression, growth condition, in vivo, strain or line
Contact
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MTAB-401.idf.txt
Sample and data relationshipE-MTAB-401.sdrf.txt
Raw data (1)E-MTAB-401.raw.1.zip
Processed data (1)E-MTAB-401.processed.1.zip
Array designA-MEXP-1174.adf.txt
Links