E-MTAB-3356 - Transcriptome profiling of human pancreatic cell lineage specification reveals functional signaling pathways and lncRNAs for cell fate determination

Status
Last updated on 9 March 2015, released on 20 February 2016
Organism
Homo sapiens
Samples (8)
Protocols (10)
Description
To guide the beta cell differentiation process in vitro, a complete understanding of the transcriptome and their regulatory network during the differentiation process is essential. Using RNA-seq, we have performed the transcriptome profiling of human embryonic stem cells (ESCs), purified ESC-derivate definitive endoderm (DE), pancreatic progenitors (PP), as well as sorted human primary pancreatic alpha cells, beta cells and exocrine cells.
Experiment types
RNA-seq of coding RNA, development or differentiation design
Contacts
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-3356.idf.txt
Sample and data relationshipE-MTAB-3356.sdrf.txt
Processed data (11)Click to browse processed data
Additional data (1)E-MTAB-3356.additional.1.zip
Links