E-MTAB-2612 - Transcription profiling by array of E. coli grown under nitrogren-starvation and normal conditions to study how it responses to nitrogen stress

Status
Submitted on 22 May 2014, last updated on 17 June 2014, released on 17 June 2014
Organism
Escherichia coli K-12
Samples (6)
Array (1)
Protocols (5)
Description
Assimilation of nitrogen is an essential process in bacteria. The nitrogen regulation stress response is an adaptive mechanism used by nitrogen-starved Escherichia coli to scavenge for alternative nitrogen sources and requires the global transcriptional regulator NtrC.
Experiment types
transcription profiling by array, stimulus or stress design
Contacts
Citation
Nitrogen stress response and stringent response are coupled in Escherichia coli. Brown DR, Barton G, Pan Z, Buck M, Wigneshweraraj S. Nat Commun 5:4115 (2014), Europe PMC 24947454
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MTAB-2612.idf.txt
Sample and data relationshipE-MTAB-2612.sdrf.txt
Raw data (1)E-MTAB-2612.raw.1.zip
Array designA-MEXP-1557.adf.txt
Links