E-MTAB-1702 - RNA-seq of coding RNA in left ventricles from BN and SHR rats

Status
Last updated on 4 June 2013, released on 19 July 2013
Organism
Rattus norvegicus
Samples (8)
Protocols (4)
Description
Gene expression data was generated in BN and SHR rats to correlate gene expression differences with CpG methylation differences detected between the strains by whole-genome bisulfite sequencing.
Experiment types
RNA-seq of coding RNA, co-expression, replicate, strain or line
Contact
Citation
Genetic analysis of the cardiac methylome at single nucleotide resolution in a model of human cardiovascular disease. Johnson MD, Mueller M, Adamowicz-Brice M, Collins MJ, Gellert P, Maratou K, Srivastava PK, Rotival M, Butt S, Game L, Atanur SS, Silver N, Norsworthy PJ, Langley SR, Petretto E, Pravenec M, Aitman TJ. PLoS Genet 10(12):e1004813 (2014), Europe PMC 25474312
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-1702.idf.txt
Sample and data relationshipE-MTAB-1702.sdrf.txt
Links