E-MTAB-1677 - Transcription profiling by tiling array of Listeria monocytogenes EGD wild type, Listeria monocytogenes EGD-e wild-type and EGD-e PrfA*

Status
Released on 1 August 2013, last updated on 3 May 2014
Organism
Listeria monocytogenes EGD, Listeria monocytogenes EGD-e
Samples (9)
Array (1)
Protocols (6)
Description
Comparison of Listeria monocytogenes transcripts in different strains (EGD wild-type versus EGD-e wild-type, EGD-e PrfA* versus EGD-e wild-type).
Experiment types
transcription profiling by tiling array, all pairs, co-expression, replicate design, species design
Contacts
Citation
Comparison of widely used Listeria monocytogenes strains EGD, 10403S, and EGD-e highlights genomic variations underlying differences in pathogenicity. Bécavin C, Bouchier C, Lechat P, Archambaud C, Creno S, Gouin E, Wu Z, Kühbacher A, Brisse S, Pucciarelli MG, García-del Portillo F, Hain T, Portnoy DA, Chakraborty T, Lecuit M, Pizarro-Cerdá J, Moszer I, Bierne H, Cossart P. MBio 5(2):e00969-14 (2014), Europe PMC 24667708
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MTAB-1677.idf.txt
Sample and data relationshipE-MTAB-1677.sdrf.txt
Raw data (1)E-MTAB-1677.raw.1.zip
Processed data (1)E-MTAB-1677.processed.1.zip
Array designA-MEXP-1572.adf.txt
Links