E-MTAB-1582 - Transcription profiling by array of A. thaliana roots control vs interaction with Hieracium pilosella roots to investigate gene expression

Status
Released on 28 January 2014, last updated on 3 June 2014
Organism
Arabidopsis thaliana
Samples (6)
Array (1)
Protocols (5)
Description
Plant roots perceive neighbouring roots even when resource depletion is low. The transcriptomic response to the presence or absence of an inferior competitor (Hieracium pilosella) is therefore examined in roots of A. thaliana. The experiment was set up in pots filled with non-sterile sand, that allowed to sample roots of eight week old Arabidopsis plants. 3 biological replicates per treatment were examined. Each of these replicates represents 3 pooled samples from individual plants.
Experiment types
transcription profiling by array, co-expression, in vivo, stimulus or stress
Contact
Citation
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MTAB-1582.idf.txt
Sample and data relationshipE-MTAB-1582.sdrf.txt
Raw data (1)E-MTAB-1582.raw.1.zip
Array designA-AFFY-2.adf.txt
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