E-MTAB-1577 - Transcription profiling by array of in vitro grown primary myoblasts isolated from biopsies originating from six healthy individuals and matching myotubes grown in myogenic differentiation medium

Status
Released on 3 December 2013, last updated on 3 June 2014
Organism
Homo sapiens
Samples (14)
Array (1)
Protocols (6)
Description
Transcriptome profiling of in vitro grown primary myoblasts isolated from biopsies originating from six healthy individuals and matching myotubes grown in myogenic differentiation medium. Two color experiment: RNA extracted from individual myoblast and myotube lines was Cy5-labeled, mixed with with a pool of RNA samples labeled with Cy3 and hybridized to Gene Expression microarrays (Agilent).
Experiment types
transcription profiling by array, co-expression, compound treatment design, dye swap design, growth condition design, in vitro design
Contacts
Citations
Simultaneous miRNA and mRNA transcriptome profiling of human myoblasts reveals a novel set of myogenic differentiation-associated miRNAs and their target genes. Dmitriev P, Barat A, Polesskaya A, OConnell MJ, Robert T, Dessen P, Walsh TA, Lazar V, Turki A, Carnac G, Laoudj-Chenivesse D, Lipinski M, Vassetzky YS. :265 (2013), Europe PMC 23597168
Defective Regulation of miRNAs Target Genes in Myoblasts from Facioscapulohumeral Dystrophy Patients. Dmitriev P, Stankevicins L, Ansseau E, Petrov A, Barat A, Dessen P, Robert T, Turki A, Lazar V, Labourier E, Belayew A, Carnac G, Laoudj-Chenivesse D, Lipinski M, Vassetzky YS. The Journal of Biological Chemistry  (2013), Europe PMC 24145033
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MTAB-1577.idf.txt
Sample and data relationshipE-MTAB-1577.sdrf.txt
Raw data (1)E-MTAB-1577.raw.1.zip
Processed data (1)E-MTAB-1577.processed.1.zip
Array designA-AGIL-28.adf.txt
Links