E-MTAB-1568 - RNA-seq of coding RNA in human plasma cells isolated from individuals with colorectal cancer, ulcertaive colitis and normal individuals

Status
Last updated on 28 March 2013, released on 29 March 2013
Organism
Homo sapiens
Samples (9)
Protocols (5)
Description
We adapted the NextGen sequencing technology to obtain more accurate spectra of mRNA and miRNA in circulation, specifically to explore the plasma-miRNA association with colorectal cancer and ulcerative colitis.
Experiment types
RNA-seq of coding RNA, disease state, replicate
Contact
Citation
The complex exogenous RNA spectra in human plasma: an interface with human gut biota?. Kai Wang, Hong Li, Yue Yuan, Alton Etheridge, Yong Zhou, David Huang, Paul Wilmes, David Galas. PloS One 7(12):e51009 (2012), Europe PMC 23251414
MINSEQE
Exp. designProtocolsFactorsProcessedSeq. reads
Files
Investigation descriptionE-MTAB-1568.idf.txt
Sample and data relationshipE-MTAB-1568.sdrf.txt
Links