E-MTAB-1553 - Transcription profiling by array of human breast cancer cell line SUM149 to compare different culture conditions

Status
Released on 18 August 2013, last updated on 8 September 2014
Organism
Homo sapiens
Samples (6)
Array (1)
Protocols (6)
Description
Comparison of different culture conditions of the human breast cancer cell line SUM149. We cultured the cells adherent in standard medium in normal cell culture flasks and as mammospheres in MammoCult (stemcell technologies) in ultra low-attachment flasks
Experiment types
transcription profiling by array, co-expression, growth condition design, in vitro
Contact
Citation
A mammosphere formation RNAi screen reveals that ATG4A promotes a breast cancer stem-like phenotype. Wolf J, Dewi DL, Fredebohm J, Muller-Decker K, Flechtenmacher C, Hoheisel JD, Boettcher M. Breast Cancer Res 15(6):r109 (2013), Europe PMC 24229464
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MTAB-1553.idf.txt
Sample and data relationshipE-MTAB-1553.sdrf.txt
Raw data (1)E-MTAB-1553.raw.1.zip
Processed data (1)E-MTAB-1553.processed.1.zip
Array designA-MEXP-2072.adf.txt
Links