E-MTAB-1498 - RNA-seq of coding RNA from four distinct human limbal compartments, including basal limbal crypts (BLCs), superficial limbal crypts (SLCs), cornea, and the supporting stroma, with the aid of laser capture microdissection and deep RNA sequencing

Status
Released on 1 July 2013, last updated on 3 May 2014
Organism
Homo sapiens
Samples (4)
Protocols (6)
Description
Comprehensive transcriptome analysis of four distinct human limbal compartments, including basal limbal crypts (BLCs), superficial limbal crypts (SLCs), cornea, and the supporting stroma, with the aid of laser capture microdissection and deep RNA sequencing.
Experiment types
RNA-seq of coding RNA, co-expression, in vivo, organism part comparison design
Contact
Citation
Transcriptional profiling of ocular limbus. Chris Bath, Danson Muttuvelu, Jeppe Emmersen, Henrik Vorum, Jesper Hjortdal, and Vladimir Zachar.
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-1498.idf.txt
Sample and data relationshipE-MTAB-1498.sdrf.txt
Links