E-MTAB-1472 - Methylation profiling by array of 33 human liver samples to reveal how the methylation status is affected by hepatitis viral infection

Status
Released on 3 January 2014, last updated on 3 May 2014
Organism
Homo sapiens
Samples (35)
Arrays (2)
Protocols (5)
Description
We perform genome wide methylation analysis using 33 clinical samples, which were obtained from patients who underwent surgical resection at the Aichi Cancer Center Hospital in accordance with institutional policies. The purpose of this experiment is revealing the methylation status affected by hepatitis viral infection.
Experiment types
methylation profiling by array, all pairs, disease state
Contact
Citation
Hepatitis Virus Infection Affects DNA Methylation in Mice With Humanized Livers. Okamoto Y, Shinjo K, Shimizu Y, Sano T, Yamao K, Gao W, Fujii M, Osada H, Sekido Y, Murakami S, Tanaka Y, Joh T, Sato S, Takahashi S, Wakita T, Zhu J, Issa JP, Kondo Y . Gastroenterology  (2013)
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MTAB-1472.idf.txt
Sample and data relationshipE-MTAB-1472.sdrf.txt
Raw data (2)E-MTAB-1472.raw.1.zip, E-MTAB-1472.raw.2.zip
Array designsA-MEXP-1691.adf.txt, A-MEXP-1692.adf.txt
Links