E-MTAB-1453 - Transcription profiling by array of Streptomyces coelicolor A3(2) M145 vs. an abrC3 mutant in nutrient broth (NB)

Status
Released on 14 January 2014, last updated on 3 May 2014
Organism
Streptomyces coelicolor A3(2)
Samples (13)
Array (1)
Protocols (12)
Description
Differential expression data set of S. coelicolor M145 and a abrC3 mutant cultured in NB. RNA samples were collected at 36, 48 and 60 hours following cDNA synthesis and labeling. The hybridization was conducted using DNA 104K microarrays (Surrey) using gDNA from S. coelicolor M145 as reference.
Experiment types
transcription profiling by array, co-expression, reference, replicate, strain or line, time series
Contact
Citation
Deciphering the regulon of Streptomyces coelicolor AbrC3, a positive response regulator of antibiotic production. Rico S, Santamaría RI, Yepes A, Rodríguez H, Laing E, Bucca G, Smith CP, Díaz M. Appl Environ Microbiol 80(8):2417-2428 (2014), Europe PMC 24509929
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MTAB-1453.idf.txt
Sample and data relationshipE-MTAB-1453.sdrf.txt
Raw data (1)E-MTAB-1453.raw.1.zip
Processed data (1)E-MTAB-1453.processed.1.zip
Array designA-MAXD-28.adf.txt
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