E-MTAB-1442 - Transcription profiling by array of Ubiquitin Specific Protease 2 (Usp2) knockout mice to investigate the renal transcriptome

Status
Released on 20 March 2013, last updated on 3 May 2014
Organism
Mus musculus
Samples (4)
Array (1)
Protocols (6)
Description
Renal transcriptome analysis of Usp2 knockout mice. Please note 'Zeitgeber time 12' means 12 hours after light onset in 12h: light 12h dark housing conditions. It is of importance in the present design because of the strong circadian oscillation of the interest gene. In the Characteristics[genetic modification] column Usp2-Lac0-SA-IRES-lacZ-WT Neo/Kan is the name of the targeting cassette which was inserted in the gene, in opposition to non for the WT who carry no mutation.
Experiment types
transcription profiling by array, co-expression, genetic modification, in vivo
Contact
Citation
Mice carrying Ubiquitin Specific Protease 2 (Usp2) gene inactivation maintain normal sodium balance and blood pressure. Daniel Pouly, Anne Debonneville, Dorothee Ruffieux-Daidie, Marc Maillard, Johannes Loffing and Olivier Staub.
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MTAB-1442.idf.txt
Sample and data relationshipE-MTAB-1442.sdrf.txt
Raw data (1)E-MTAB-1442.raw.1.zip
Processed data (1)E-MTAB-1442.processed.1.zip
Array designA-AFFY-130.adf.txt
Links