E-MTAB-1181 - Transcription profiling by high throughput sequencing within ENGAGE project of blood from human individuals with high or low fasting glucose levels

Status
Released on 14 May 2013, last updated on 3 May 2014
Organism
Homo sapiens
Samples (19)
Protocols (2)
Description
RNA was isolated from total blood (PaxGene) from human individuals with high or low fasting glucose levels (15% most extreme values)
Experiment types
RNA-seq of coding RNA, DeepSAGE, co-expression
Contact
Citation
DeepSAGE reveals genetic variants associated with alternative polyadenylation and expression of coding and non-coding transcripts. Zhernakova DV, de Klerk E, Westra HJ, Mastrokolias A, Amini S, Ariyurek Y, Jansen R, Penninx BW, Hottenga JJ, Willemsen G, de Geus EJ, Boomsma DI, Veldink JH, van den Berg LH, Wijmenga C, den Dunnen JT, van Ommen GJ, t Hoen PA, Franke L. PLoS Genet 9(6):e1003594 (2013), Europe PMC 23818875
MINSEQE
Exp. designProtocolsFactorsProcessedSeq. reads
Files
Investigation descriptionE-MTAB-1181.idf.txt
Sample and data relationshipE-MTAB-1181.sdrf.txt
Links