E-MTAB-1141 - Genotyping by array of 22 human adenoid cystic carcinoma samples using Affymetrix SNP6 chips

Status
Last updated on 23 May 2012, released on 1 June 2013
Organism
Homo sapiens
Samples (22)
Array (1)
Protocols (1)
Description
A standard Affymetrix SNP6.0 assay was performed on the tumour samples of patients where we have exonic sequence data from both the tumour and normal DNA of the same patients. The resulting cellularity, copy number and ploidy information generated helped to inform bespoke algorithms in analysing the sequence data.
Experiment types
genotyping by array, disease state, genotyping
Contact
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MTAB-1141.idf.txt
Sample and data relationshipE-MTAB-1141.sdrf.txt
Raw data (3)E-MTAB-1141.raw.1.zip, E-MTAB-1141.raw.2.zip, E-MTAB-1141.raw.3.zip
Array designA-AFFY-142.adf.txt
Links