E-MEXP-584 - Transcription profiling of E. coli 83972 grown in minimal lab media, in urine and in 3 individual patients

Status
Submitted on 8 March 2006, released on 1 January 2007, last updated on 2 May 2014
Organism
Escherichia coli
Samples (9)
Array (1)
Protocols (8)
Description
Comparison of gene expression profile of E. coli 83972 grown in minimal lab media, in urine and in 3 individual patients.
Experiment types
transcription profiling by array, growth condition
Contacts
Citations
Transcriptomics and adaptive genomics of the asymptomatic bacteriuria Escherichia coli strain 83972. Hancock V, Seshasayee AS, Ussery DW, Luscombe NM, Klemm P. :523-534 (2008), Europe PMC 18317809
Identification of Genes Important for Growth of Asymptomatic Bacteriuria Escherichia coli in Urine. Rebecca M. Vejborg; Mari R. de Evgrafov; Minh Duy Phan; Makrina Totsika; Mark A. Schembri; Viktoria Hancock. Infect Immun 80(9):3179 (2012), Europe PMC 22753377
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MEXP-584.idf.txt
Sample and data relationshipE-MEXP-584.sdrf.txt
Raw data (1)E-MEXP-584.raw.1.zip
Processed data (1)E-MEXP-584.processed.1.zip
Array designA-AFFY-56.adf.txt
R ExpressionSetE-MEXP-584.eSet.r
Links