E-MEXP-535 - Chromatin immunoprecipitation of three PcG proteins and of histone H3 trimethylated at Lys 27 in Drosophila

Status
Released on 30 December 2006, last updated on 2 May 2014
Organism
Drosophila melanogaster
Samples (6)
Arrays (2)
Protocols (7)
Description
We determined the distribution of three PcG proteins: PC, PSC and E(Z), and of histone H3 trimethylated at Lys 27 by chromatin immunoprecipitation (ChIP) coupled with analysis of immunoprecipitated DNA with a high density genomic tiling microarray (Affymetrix).
Experiment types
ChIP-chip by array, binding site identification
Contact
Citations
Chromatin domain boundary element search tool for Drosophila. Srinivasan, Arumugam; Mishra, Rakesh K. Nucleic Acids Res , Europe PMC 22287636
Genome-wide analysis of Polycomb targets in Drosophila melanogaster. Yuri B Schwartz, Tatyana G Kahn, David A Nix, Xiao-Yong Li, Richard Bourgon, Mark Biggin and Vincenzo Pirrotta. Nature Genetics 
Polycomb Complexes and the Propagation of the Methylation Mark at the Drosophila Ubx Gene. Kahn, Tatyana G.; Schwartz, Yuri B.; Dellino, Gaetano I.; Pirrotta, Vincenzo. , Europe PMC 16887811
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MEXP-535.idf.txt
Sample and data relationshipE-MEXP-535.sdrf.txt
Raw data (3)E-MEXP-535.raw.1.zip, E-MEXP-535.raw.2.zip, E-MEXP-535.raw.3.zip
Processed data (1)E-MEXP-535.processed.1.zip
Array designsA-AFFY-50.adf.txt, A-AFFY-52.adf.txt
R ExpressionSetE-MEXP-535.eSet.r
Links