E-MEXP-3940 - Transcription profiling by array of HeLa cells after miR-31 mimic or miR-31 inhibitor transduction.

Status
Released on 31 July 2013, last updated on 3 June 2014
Organism
Homo sapiens
Samples (5)
Array (1)
Protocols (6)
Description
Expression profiling of HeLa cells transduced stably with pre-miR-31 mimic, miR-31 inhibitor and parental HeLa cells was performed using Human Whole Genome OneArray v6.1 (Phalanx Biotech Group, Taiwan, China). Four hybridizations for each group were performed, with two biological and two technical replicates. Briefly, the signal intensity of each spot was loaded into the Rosetta Resolver System (Rosetta Biosoftware, Cambridge, MA, USA) for data analysis. The technical repeat data were tested by Pearson's correlation coefficient calculation to check the reproducibility (R>0.95). Normalized spot intensities were transformed to gene expression log2 ratios between the control and treatment groups.
Experiment types
transcription profiling by array, co-expression, in vitro, physiological process
Contact
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MEXP-3940.idf.txt
Sample and data relationshipE-MEXP-3940.sdrf.txt
Raw data (1)E-MEXP-3940.raw.1.zip
Array designA-MEXP-2328.adf.txt
Links