E-MEXP-3901 - Transcription profiling by array of Gossypium hirsutum fiber in wild-type and immature fiber mutant

Status
Released on 1 May 2014, last updated on 26 June 2014
Organism
Gossypium hirsutum
Samples (12)
Array (1)
Protocols (7)
Description
We performed a comparative genomics approach between im mutant and TM-1 in order to understand the function of im gene reducing the degree of fiber cell wall development. We compared transcriptome profiles of developing fibers (10, 17, and 28 days post anthesis (DPA)) between two NILs using Affymetrix cotton array chip containing 21,854 transcripts.
Experiment types
transcription profiling by array, co-expression, genotype design, replicate design
Contact
Citation
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MEXP-3901.idf.txt
Sample and data relationshipE-MEXP-3901.sdrf.txt
Raw data (1)E-MEXP-3901.raw.1.zip
Processed data (1)E-MEXP-3901.processed.1.zip
Array designA-AFFY-181.adf.txt
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