E-MEXP-3901 - Transcription profiling by array of Gossypium hirsutum fiber in wild-type and immature fiber mutant
Released on 1 May 2014, last updated on 26 June 2014
We performed a comparative genomics approach between im mutant and TM-1 in order to understand the function of im gene reducing the degree of fiber cell wall development. We compared transcriptome profiles of developing fibers (10, 17, and 28 days post anthesis (DPA)) between two NILs using Affymetrix cotton array chip containing 21,854 transcripts.
transcription profiling by array, co-expression, genotype design, replicate design
Functional analyses of cotton (Gossypium hirsutum L.) immature fiber (im) mutant infer that fiber cell wall development is associated with stress responses. Kim HJ, Tang Y, Moon HS, Delhom CD, Fang DD. BMC Genomics 14:889 (2013), Europe PMC 24341782