E-MEXP-3865 - Transcription profiling by array of rice plants (Oryza sativa L. cv. Nipponbare) subjected to dehydration treatment for 3 days

Status
Released on 3 March 2014, last updated on 3 May 2014
Organism
Oryza sativa (japonica cultivar-group)
Samples (3)
Array (1)
Protocols (8)
Description
Rice plants (Oryza sativa L. cv. Nipponbare) were grown in plastic pots filled with nutrient soil for 2 weeks under flooded lowland conditions with a 12-h light (28C)/12-h dark (25C) regimen (ca. 1500 umol photons m–2 s–1). The plants were subjected to dehydration treatment by growth at 28C without watering for 3 days until the soil moisture content was 15.6% (w/w; SD = 1.1%).
Experiment types
transcription profiling by array, co-expression, dye swap design, growth condition design, stimulus or stress design
Contact
Citation
Integrated analysis of the effects of cold and dehydration on rice metabolites, phytohormones, and gene transcripts. Kyonoshin Maruyama, Kaoru Urano, Kyouko Yoshiwara, Yoshihiko Morishita, Nozomu Sakurai, Hideyuki Suzuki, Mikiko Kojima, Hitoshi Sakakibara, Daisuke Shibata, Kazuki Saito, Kazuo Shinozaki, Kazuko Yamaguchi-Shinozaki. Plant Physiol  (2014), Europe PMC 24515831
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MEXP-3865.idf.txt
Sample and data relationshipE-MEXP-3865.sdrf.txt
Raw data (1)E-MEXP-3865.raw.1.zip
Array designA-MEXP-2298.adf.txt
Links