E-MEXP-3813 - ChAP-chip by array of wild-type and hnsstpA E. coli cells to identify Hha binding regions

Status
Released on 2 April 2013, last updated on 3 May 2014
Organism
Escherichia coli
Samples (4)
Array (1)
Protocols (6)
Description
The analysis of the distribution of Hha binding regions (His-Hha were expressed from pQE plasmid) on E. coli chromosome in E. coli W3110 (wild type) and hns/stpA mutant cells.
Experiment types
ChIP-chip by array, binding site identification, cell type comparison, replicate
Contact
Citation
Functions of the Hha and YdgT Proteins in Transcriptional Silencing by the Nucleoid Proteins, H-NS and StpA, in Escherichia coli. Takeshi Ueda; Hiroki Takahashi; Ebru Uyar; Shu Ishikawa; Naotake Ogasawara; Taku Oshima. DNA Res  (2013), Europe PMC 23543115
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MEXP-3813.idf.txt
Sample and data relationshipE-MEXP-3813.sdrf.txt
Raw data (1)E-MEXP-3813.raw.1.zip
Array designA-AFFY-191.adf.txt
Links