E-MEXP-3778 - Transcription profiling by array of human fibroblast cell line WI38 expressing shCt or shUbc9 to analyse transcriptionnal changes in cells were sumoylation pathway is inactivated

Status
Released on 25 July 2013, last updated on 2 October 2013
Organism
Homo sapiens
Samples (6)
Array (1)
Protocols (6)
Description
mRNA profiling of WI38 expressing shCt or shUbc9 4 days post-infection. The goals of this study is to analyse transcriptionnal changes in cells were sumoylation pathway is inactivated and to compare them with ChIPseq data for several histones marks and proteins of the SUMO machinery.
Experiment types
transcription profiling by array, cellular modification, co-expression, in vitro
Contact
Citation
Sumoylation at chromatin governs coordinated repression of a transcriptional program essential for cell growth and proliferation. Neyret-Kahn H, Benhamed M, Ye T, Le Gras S, Cossec JC, Lapaquette P, Bischof O, Ouspenskaia M, Dasso M, Seeler J, Davidson I, Dejean A . Genome Res 23(10):1563 (2013), Europe PMC 23893515
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MEXP-3778.idf.txt
Sample and data relationshipE-MEXP-3778.sdrf.txt
Raw data (1)E-MEXP-3778.raw.1.zip
Array designA-AFFY-141.adf.txt
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