E-MEXP-3742 - Transcription profiling by array of K. pneumoniae to investigate the regulon of the transcriptional activator RarA

Status
Released on 21 March 2013, last updated on 3 May 2014
Organism
Klebsiella pneumoniae
Samples (6)
Array (1)
Protocols (6)
Description
The experimental design was to determine the regulon of the transcriptional activator RarA. This was done by comparing the transcriptome profiles between a rarA overexpressor and the baseline control. RarA overexpression was achieved by plasmid mediated overexpression of the rarA gene and the baseline control was a vector only strain.
Experiment types
transcription profiling by array, co-expression, in vitro, individual genetic characteristics
Contact
Citation
Elucidating the Regulon of Multidrug Resistance Regulator RarA in Klebsiella pneumoniae. Shyamasree De Majumdar; Mark Veleba; Sarah Finn; Seamus Fanning; Thamarai Schneiders. Antimicrobial Agents Chemother (Bethesda) :1603 (2013), Europe PMC 23318802
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MEXP-3742.idf.txt
Sample and data relationshipE-MEXP-3742.sdrf.txt
Raw data (1)E-MEXP-3742.raw.1.zip
Processed data (2)E-MEXP-3742.processed.1.zip, E-MEXP-3742.processed.2.zip
Array designA-MEXP-2204.adf.txt
Links