E-MEXP-3267 - Ruberti A.thaliana Shade Avoidance Response wt and phyA

Status
Released on 29 July 2013, last updated on 4 September 2013
Organism
Arabidopsis thaliana
Samples (8)
Array (1)
Protocols (6)
Description
Aim of the experiment is the identification of genes differentially regulated in phyA seedlings relative to wild type after prolonged exposure to low R/FR. To this end, gene expression changes were analysed in Arabidopsis wild-type and phyA knock-out mutant seedlings exposed to low R/FR light. The experiment was designed to enable comparison between the different genotypes exposed or not exposed to low R/FR light.
Experiment types
transcription profiling by array, all pairs, co-expression, genetic modification
Contact
Citation
Dynamics of the shade avoidance response in Arabidopsis thaliana. Ciolfi A, Sessa G, Sassi M, Possenti M, Salvucci S, Carabelli M, Morelli G and Ruberti I. Plant Physiol 163(1):331 (2013), Europe PMC 23893169
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MEXP-3267.idf.txt
Sample and data relationshipE-MEXP-3267.sdrf.txt
Raw data (1)E-MEXP-3267.raw.1.zip
Array designA-AFFY-2.adf.txt
Links