E-MEXP-300 - Transcription profiling of Arabidopsis mutants (elo2, elo3, drl1-2 and ang4) vs the wild type Ler strain

Status
Released on 6 April 2005, last updated on 2 May 2014
Organism
Arabidopsis thaliana
Samples (12)
Array (1)
Protocols (11)
Description
The goal is to compare each mutant (elo2, elo3, drl1-2 and ang4) to the wild-type Ler. The experimental design comprised 3 replicates of each genotype, one replicate corresponding to one RNA extraction on a independent pool of plants.
Experiment types
transcription profiling by array, genetic modification, strain or line
Contacts
Paul Van Hummelen <tom.bogaert@vib.be>, Delphine Fleury, Dirk Inzé, Gerda Cnops, Hilde Nelissen, Jan Traas, José Luis Micol, Leonardo Bruno, Lieven De Veylder, Marc Van Montagu, Mieke Van Lijsebettens, Pedro Robles
Citations
Plant Elongater regulates auxin-related genes during RNA polymerase II transcription elongation. Nelissen H, De Groeve S, Fleury D, Neyt P, Bruno L, Bitonti MB, Vandenbussche F, Van der Straeten D, Yamaguchi T, Tsukaya H, Witters E, De Jaeger G, Houben A, Van Lijsebettens M.
ASYMMETRIC LEAVES2 and Elongator, a Histone Acetyltransferase Complex, Mediate the Establishment of Polarity in Leaves of Arabidopsis thaliana. Kojima, Shoko; Iwasaki, Mayumi; Takahashi, Hiro; Imai, Tomoya; Matsumura, Yoko; Fleury, Delphine; Van Lijsebettens, Mieke; Machida, Yasunori; Machida, Chiyoko. Plant Cell Physiol 52(8):1259 (2011), Europe PMC 21700721
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MEXP-300.idf.txt
Sample and data relationshipE-MEXP-300.sdrf.txt
Raw data (1)E-MEXP-300.raw.1.zip
Processed data (1)E-MEXP-300.processed.1.zip
Array designA-AFFY-2.adf.txt
R ExpressionSetE-MEXP-300.eSet.r
Links