E-MEXP-2405 - Transcription profiling of EDS1- and SA-dependent genes in Arabidopsis nudt7-1

Status
Released on 8 February 2010, last updated on 2 May 2014
Organism
Arabidopsis thaliana
Samples (15)
Array (1)
Protocols (7)
Description
nudt7-1 mutant plant exhibit stunted growth, enhanced basal resistance, elevated SA levels and spontaneous leaf cell death that is restricted to single cells but does not spread. All of these phenotypes depend on EDS1, a key regulator of plant innate immunity. Moreover, SA depletion in nudt7-1 results in EDS1-dependent cell death exacerbation and strong growth retardation. In this this experiment, we used 4-week-old soil-grown plants to seek for EDS1- and SA-regulated genes in nudt7-1 to identify novel components of the EDS1- and SA-signalling pathways.
Experiment types
transcription profiling by array, co-expression, individual genetic characteristics, replicate
Contact
Citation
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MEXP-2405.idf.txt
Sample and data relationshipE-MEXP-2405.sdrf.txt
Raw data (1)E-MEXP-2405.raw.1.zip
Processed data (2)E-MEXP-2405.processed.1.zip, E-MEXP-2405.processed.2.zip
Array designA-AFFY-2.adf.txt
Links