E-MEXP-2220 - Tiling path profiling of Arabidopsis accession

Status
Submitted on 16 June 2009, released on 19 October 2009, last updated on 10 June 2011
Organism
Arabidopsis thaliana
Samples (4)
Array (1)
Protocols (5)
Description
Arabidopsis DNA from accessions was hybridized in duplicate to Affymetrix Tiling 1.0R arrays.
Experiment types
transcription profiling by tiling array, replicate, strain or line, tiling path
Contact
Citation
Substantial deletion overlap among divergent Arabidopsis genomes revealed by intersection of short reads and tiling arrays. Santuari L, Pradervand S, Amiguet-Vercher AM, Thomas J, Dorcey E, Harshman K, Xenarios I, Juenger TE, Hardtke CS. Genome Biol 11(1):r4 (2010), Europe PMC 20067627
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MEXP-2220.idf.txt
Sample and data relationshipE-MEXP-2220.sdrf.txt
Raw data (2)E-MEXP-2220.raw.1.zip, E-MEXP-2220.raw.2.zip
Array designA-AFFY-139.adf.txt
R ExpressionSetE-MEXP-2220.eSet.r
Links