E-MEXP-22 - Comparative genomic hybridization of Xylella fastidiosa 9a5c (pathogenic, reference strain) and J1a12 (non-pathogenic)

Status
Released on 1 April 2004, last updated on 2 May 2014
Organism
Xylella fastidiosa
Samples (2)
Arrays (2)
Protocols (7)
Description
Comparison of genomic DNA from two strains of Xylella fastidiosa: 9a5c (pathogenic, reference strain) and J1a12 (non-pathogenic).
Experiment types
comparative genomic hybridization by array, comparative genome hybridization
Contacts
Paulo A Zaini <pzaini@iq.usp.br>, Adriana Y Matsukuma, Alan M Durham, Aline M da Silva, Ana Claudia R da Silva, Diva C Teixeira, Hamza F El-Dorry, Leandro M Moreira, Patrícia B Monteiro, Ricardo Z N Vêncio, Sergio Verjovski-Almeida, Suely L Gomes, Tie Koide
Citation
DNA microarray-based genome comparison of a pathogenic and a nonpathogenic strain of Xylella fastidiosa delineates genes important for bacterial virulence. Tie Koide, Paulo A. Zaini, Leandro M. Moreira, Ricardo Z.N. Vêncio, Adriana Y. Matsukuma, Alan M. Durham, Diva C. Teixeira, Hamza F. El-Dorry, Patrícia B. Monteiro, Ana Claudia R. da Silva, Sergio Verjovski-Almeida, Aline M. da Silva, Suely L. Gomes.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MEXP-22.idf.txt
Sample and data relationshipE-MEXP-22.sdrf.txt
Raw data (1)E-MEXP-22.raw.1.zip
Processed data (1)E-MEXP-22.processed.1.zip
Array designsA-MEXP-20.adf.txt, A-MEXP-21.adf.txt
Links