E-MEXP-2132 - Transcription profiling of Streptomyces coelicolor wild type and delta0877 and delta7173 mutant strains

Status
Released on 17 April 2009, last updated on 2 May 2014
Organism
Streptomyces coelicolor
Samples (16)
Arrays (2)
Protocols (9)
Description
Gene expression analysis of S. coelicolor M145 wild type strain, and mutants delta0877 and delta 7173. RNA samples were extracted from 48 h culture samples during growth in flasks in defined mineral medium MG supplemented with 5% of yeast extract. Cy5 labelled genomic DNA was used as the common reference.
Experiment types
transcription profiling by array, co-expression, individual genetic characteristics, reference
Contact
Citation
LAL regulators SCO0877 and SCO7173 as pleiotropic modulators of phosphate starvation response and actinorhodin biosynthesis in Streptomyces coelicolor. Guerra SM, Rodríguez-García A, Santos-Aberturas J, Vicente CM, Payero TD, Martín JF, Aparicio JF. PLoS One 7(2):e31475 (2012), Europe PMC 22363654
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MEXP-2132.idf.txt
Sample and data relationshipE-MEXP-2132.sdrf.txt
Raw data (1)E-MEXP-2132.raw.1.zip
Processed data (1)E-MEXP-2132.processed.1.zip
Array designsA-MEXP-1569.adf.txt, A-MEXP-1570.adf.txt
R ExpressionSetE-MEXP-2132.eSet.r
Links