E-MEXP-1988 - Transcription profiling of Arabidopsis plants with the chlorophyll removed by combining enhancer trap and RNAi approaches

Status
Released on 1 December 2009, last updated on 2 May 2014
Organism
Arabidopsis thaliana
Samples (4)
Array (1)
Protocols (7)
Description
Chlorophyll was removed from the veins of the C3 plant Arabidopsis by combining enhancer trap and RNAi approaches. Three independent transgenic lines were created. These were each compared to the parent line, J1511, in a microarray experiment.
Experiment types
transcription profiling by array, cellular modification, co-expression, in vivo
Contact
Citation
Photosynthesis in cells around veins of the C(3) plant Arabidopsis thaliana is important for both the shikimate pathway and leaf senescence as well as contributing to plant fitness. Janacek SH, Trenkamp S, Palmer B, Brown NJ, Parsley K, Stanley S, Astley HM, Rolfe SA, Paul Quick W, Fernie AR, Hibberd JM.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MEXP-1988.idf.txt
Sample and data relationshipE-MEXP-1988.sdrf.txt
Raw data (1)E-MEXP-1988.raw.1.zip
Processed data (1)E-MEXP-1988.processed.1.zip
Array designA-MEXP-1493.adf.txt
R ExpressionSetE-MEXP-1988.eSet.r
Links