E-MEXP-1794 - Transcription profiling of Arabidopsis after induction of Golden2-like (GLK1 or GLK2) expression in a glk mutant background to identify downstream gene targets

Status
Submitted on 10 September 2008, released on 1 February 2009, last updated on 2 May 2014
Organism
Arabidopsis thaliana
Samples (16)
Array (1)
Protocols (7)
Description
Defining the transcriptome response to the brief induction of Golden2-like (GLK) gene expression in a glk mutant background. Expression of either GLK1 or GLK2 from an inducible promoter by the application of dexamethasone. Changes to transcriptome four hours after induction are compared with uninduced controls.
Experiment types
transcription profiling by array, co-expression, compound treatment, replicate
Contact
Citation
GLK Transcription Factors Coordinate Expression of the Photosynthetic Apparatus in Arabidopsis. Waters, Mark T.; Wang, Peng; Korkaric, Muris; Capper, Richard G.; Saunders, Nigel J.; Langdale, Jane A. Plant Cell :tpc.108.065250v1 (2009)
MIAME
PlatformsProtocolsFactorsProcessedRaw
Files
Investigation descriptionE-MEXP-1794.idf.txt
Sample and data relationshipE-MEXP-1794.sdrf.txt
Raw data (1)E-MEXP-1794.raw.1.zip
Processed data (1)E-MEXP-1794.processed.1.zip
Array designA-MEXP-1429.adf.txt
R ExpressionSetE-MEXP-1794.eSet.r
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